| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170754834
Identifier: 170754834
GI number: 170754834
Start: 2021376
End: 2021795
Strand: Reverse
Name: 170754834
Synonym: CLD_2741
Alternate gene names: NA
Gene position: 2021795-2021376 (Counterclockwise)
Preceding gene: 170755754
Following gene: 170757502
Centisome position: 51.08
GC content: 29.05
Gene sequence:
>420_bases GTGAAATCTATTACTTCAAAGGTATCCTATTTAAAAGGCCTTATAGAAGGTCTAGAGGTTAAAAAGGATAGTAAAGAAGG AAAAGTAATTTCTGTTATGTCTGATATATTACAGGACATAGCTTATGAAGTTGAAGAGATGAAAGAATCTCAAAGTATAA TACAGGAATATGTAGATACTATAGATCAAGATTTACTTTCCCTTCAGGAAGATTTTTATGATGAAGATGAGGATGATGAT TTTCTAGAAGACTTTTTAGGAATAGAATGTCCTATGTGTGATGAAACCATCTATATTGATAAAGATGTATTTGGAGGTAA AGGAAATATTTGTTGTCCGAATTGCCACAAAGAAATATCCTTAAACAATATATATAGTTGTGACTATGAGTGTGAAGAAT TAAAAAATAAAAATGATTAA
Upstream 100 bases:
>100_bases AATGAAGGAGAAACTATCAGAGTAGATACAAGAACTGGTGAATATATGGAAAGAGTTTAGTCTATACTATAGATAGTATA ATTTGTAAGGATGTGATTTT
Downstream 100 bases:
>100_bases TTAAAACACCCTATAAGATTTTAATCTTATAGGGTGTTTTTTATACAAAAAATTATATGGTATATAGTATTACTATTATT AATGAACTGAAAAAGAATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MKSITSKVSYLKGLIEGLEVKKDSKEGKVISVMSDILQDIAYEVEEMKESQSIIQEYVDTIDQDLLSLQEDFYDEDEDDD FLEDFLGIECPMCDETIYIDKDVFGGKGNICCPNCHKEISLNNIYSCDYECEELKNKND
Sequences:
>Translated_139_residues MKSITSKVSYLKGLIEGLEVKKDSKEGKVISVMSDILQDIAYEVEEMKESQSIIQEYVDTIDQDLLSLQEDFYDEDEDDD FLEDFLGIECPMCDETIYIDKDVFGGKGNICCPNCHKEISLNNIYSCDYECEELKNKND >Mature_139_residues MKSITSKVSYLKGLIEGLEVKKDSKEGKVISVMSDILQDIAYEVEEMKESQSIIQEYVDTIDQDLLSLQEDFYDEDEDDD FLEDFLGIECPMCDETIYIDKDVFGGKGNICCPNCHKEISLNNIYSCDYECEELKNKND
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15969; Mature: 15969
Theoretical pI: Translated: 3.82; Mature: 3.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 5.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSITSKVSYLKGLIEGLEVKKDSKEGKVISVMSDILQDIAYEVEEMKESQSIIQEYVDT CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IDQDLLSLQEDFYDEDEDDDFLEDFLGIECPMCDETIYIDKDVFGGKGNICCPNCHKEIS HHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCEECCCCCCCCC LNNIYSCDYECEELKNKND CCCEEECCCCHHHCCCCCC >Mature Secondary Structure MKSITSKVSYLKGLIEGLEVKKDSKEGKVISVMSDILQDIAYEVEEMKESQSIIQEYVDT CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IDQDLLSLQEDFYDEDEDDDFLEDFLGIECPMCDETIYIDKDVFGGKGNICCPNCHKEIS HHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCEECCCCCCCCC LNNIYSCDYECEELKNKND CCCEEECCCCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA