| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757374
Identifier: 170757374
GI number: 170757374
Start: 1058502
End: 1058894
Strand: Direct
Name: 170757374
Synonym: CLD_3615
Alternate gene names: NA
Gene position: 1058502-1058894 (Clockwise)
Preceding gene: 170755899
Following gene: 170754705
Centisome position: 26.74
GC content: 23.92
Gene sequence:
>393_bases ATGAAAAATAGTCTTGAAATATTAAATAGTAATTACAAAAGTGAGAAAGGTAGTTTTATATATTCACTGCACGAAAGAAA TTATTTTAATAAAGATTTATATTGGGAATATTATAACGCTATATTAAATATTACGGAATCTTCACTTAACAAACCATTAG ATAAAGAAATATCTAAAATGATTTTTGATACATATAATTATTTTTTAAAATCTATCATATGGCACTTATCAACTAATGAT TTAAGTAAAATTGATAACTTCCCATCAGAAGGAATTAATCTATATGTTGAAAGGCTAAGTGTTAGGATTAGTAGTGGGTA TTTAAAAAAACGTCATATTGATGAATGTATCTTTGATGAAGAATTACAAAACCCATATTATAAGGCGGATTAA
Upstream 100 bases:
>100_bases GATGGAAACTATTATAATACAGTTATGATGGGAAGATTATTAGAGAAATAGATCTAGCAATTAACTTATACTGTTCATTA ACTTTGTTTGGGGGTTCTGT
Downstream 100 bases:
>100_bases GGGTTTAAGACATAATTTTTTATAGATAGTAAATACTTAAAATTAATTTATATGAAGAAATATAAATCATTGATATTAAG GAGTTAACGCATGAAATATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MKNSLEILNSNYKSEKGSFIYSLHERNYFNKDLYWEYYNAILNITESSLNKPLDKEISKMIFDTYNYFLKSIIWHLSTND LSKIDNFPSEGINLYVERLSVRISSGYLKKRHIDECIFDEELQNPYYKAD
Sequences:
>Translated_130_residues MKNSLEILNSNYKSEKGSFIYSLHERNYFNKDLYWEYYNAILNITESSLNKPLDKEISKMIFDTYNYFLKSIIWHLSTND LSKIDNFPSEGINLYVERLSVRISSGYLKKRHIDECIFDEELQNPYYKAD >Mature_130_residues MKNSLEILNSNYKSEKGSFIYSLHERNYFNKDLYWEYYNAILNITESSLNKPLDKEISKMIFDTYNYFLKSIIWHLSTND LSKIDNFPSEGINLYVERLSVRISSGYLKKRHIDECIFDEELQNPYYKAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15592; Mature: 15592
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNSLEILNSNYKSEKGSFIYSLHERNYFNKDLYWEYYNAILNITESSLNKPLDKEISKM CCCCHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH IFDTYNYFLKSIIWHLSTNDLSKIDNFPSEGINLYVERLSVRISSGYLKKRHIDECIFDE HHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH ELQNPYYKAD HHCCCCCCCC >Mature Secondary Structure MKNSLEILNSNYKSEKGSFIYSLHERNYFNKDLYWEYYNAILNITESSLNKPLDKEISKM CCCCHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH IFDTYNYFLKSIIWHLSTNDLSKIDNFPSEGINLYVERLSVRISSGYLKKRHIDECIFDE HHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH ELQNPYYKAD HHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA