Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is kdpE [C]

Identifier: 170757319

GI number: 170757319

Start: 618330

End: 619283

Strand: Direct

Name: kdpE [C]

Synonym: CLD_0245

Alternate gene names: 170757319

Gene position: 618330-619283 (Clockwise)

Preceding gene: 170756419

Following gene: 170755206

Centisome position: 15.62

GC content: 24.95

Gene sequence:

>954_bases
GTGCAAAATATTATAATATTAGACGATATGAGTTATATGAGATATAGAGTTAAAGATCTTTTAGAGGAAAAAGACATAAA
AGTTTATGAGACTTCTACTTCCTTTGAATTTTTTAATAAGCTTTATGAAAAAAAGGATAATATAGATTTGATAATACTGG
AGTTAGGTTTAACTAGGGAAGATGGATTTGAGGTAGTTGAAAAAATAAGAGAAAAGAATGTAGACATTCCTATAGTTATA
CTAACTAAGGTAAATACTAGAGATGCCTTTGCAAAGGTAATAAGAGAAGGTATTTCAGATTATATATTAAAACCTTTTGA
TAATAAAGTTTTATTAGATAGAATAGTTAAAACTATAAAGGAAAGTAAAGCTAGTAAAGAAGAAGTATCAATAGGGAAGA
AATCTAAAGTTCAAAAAATATATATTAGTGAAGATAATGAAAACATTGATAAAGATAAAGAGGAATTTGCTAAAGGAAAA
GAAATCGCAGATTTTAATGGTATAGAAGAAGAATTACCAGAAGAGTTTAAAATTTATTTTGTTGATGAATTAAATAAAGC
TAAAACAGATAATACAAAAGTTTCTTCTGTTGTATTTACTCTTATAAAAAATACAGATGAGGAAGAAAAAATAGATGTAA
AAGAAAGTTATATAACATTAACAGAGGTTTTTTATAAAGGAATAAAGGATATTTTTAAAGCCCCAAATTTTATAACAAAA
CATGGATTATTAACTTTTGTAGCTGTATTGCCAAATTGTAATGAAGAGAAAGTTGAAGATATGAAAAATAGAATACAAGA
AAAATATAAAATGCTTTCTTTAATTTATCCTCAATTATCACAATATCATGTAGGATACGGAAATGTAACTTATCCTTTAG
ATGGAGATAACGTAGAAGCACTTATAGATAAACTTATGGATAAGATGAGAGAGAATATCAAATTAAAAGAATAA

Upstream 100 bases:

>100_bases
ATGGACAAATCATAACAATAGATGGAGCTATGTGTTAATTAATATTAAATATAAAGATTCCAAAGTATAAAAAAATAATT
TAAATATGAGAGTGATAAGC

Downstream 100 bases:

>100_bases
TTGAAAAAAATTTTATTGTTATTCCCAATTAAGAAGTAAGGAAAAGAAGGAAAGGCCCCCAGCAATTATTTTGCGGGCAG
GCCTTTTATTCATACTAAAA

Product: response regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Two Component; Chemotaxis Response Regulator; Two-Component System Response Regulatory Protein RprY; Response Regulator Receiver Protein

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MQNIIILDDMSYMRYRVKDLLEEKDIKVYETSTSFEFFNKLYEKKDNIDLIILELGLTREDGFEVVEKIREKNVDIPIVI
LTKVNTRDAFAKVIREGISDYILKPFDNKVLLDRIVKTIKESKASKEEVSIGKKSKVQKIYISEDNENIDKDKEEFAKGK
EIADFNGIEEELPEEFKIYFVDELNKAKTDNTKVSSVVFTLIKNTDEEEKIDVKESYITLTEVFYKGIKDIFKAPNFITK
HGLLTFVAVLPNCNEEKVEDMKNRIQEKYKMLSLIYPQLSQYHVGYGNVTYPLDGDNVEALIDKLMDKMRENIKLKE

Sequences:

>Translated_317_residues
MQNIIILDDMSYMRYRVKDLLEEKDIKVYETSTSFEFFNKLYEKKDNIDLIILELGLTREDGFEVVEKIREKNVDIPIVI
LTKVNTRDAFAKVIREGISDYILKPFDNKVLLDRIVKTIKESKASKEEVSIGKKSKVQKIYISEDNENIDKDKEEFAKGK
EIADFNGIEEELPEEFKIYFVDELNKAKTDNTKVSSVVFTLIKNTDEEEKIDVKESYITLTEVFYKGIKDIFKAPNFITK
HGLLTFVAVLPNCNEEKVEDMKNRIQEKYKMLSLIYPQLSQYHVGYGNVTYPLDGDNVEALIDKLMDKMRENIKLKE
>Mature_317_residues
MQNIIILDDMSYMRYRVKDLLEEKDIKVYETSTSFEFFNKLYEKKDNIDLIILELGLTREDGFEVVEKIREKNVDIPIVI
LTKVNTRDAFAKVIREGISDYILKPFDNKVLLDRIVKTIKESKASKEEVSIGKKSKVQKIYISEDNENIDKDKEEFAKGK
EIADFNGIEEELPEEFKIYFVDELNKAKTDNTKVSSVVFTLIKNTDEEEKIDVKESYITLTEVFYKGIKDIFKAPNFITK
HGLLTFVAVLPNCNEEKVEDMKNRIQEKYKMLSLIYPQLSQYHVGYGNVTYPLDGDNVEALIDKLMDKMRENIKLKE

Specific function: Member Of The Two-Component Regulatory System Kdpd/Kdpe Involved In The Regulation Of The Kdp Operon. [C]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37040; Mature: 37040

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNIIILDDMSYMRYRVKDLLEEKDIKVYETSTSFEFFNKLYEKKDNIDLIILELGLTRE
CCCEEEECCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCCEEEEEEECCCCC
DGFEVVEKIREKNVDIPIVILTKVNTRDAFAKVIREGISDYILKPFDNKVLLDRIVKTIK
CCHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
ESKASKEEVSIGKKSKVQKIYISEDNENIDKDKEEFAKGKEIADFNGIEEELPEEFKIYF
HHCCCHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHCCCCCCCCCCCHHHCCHHHEEEE
VDELNKAKTDNTKVSSVVFTLIKNTDEEEKIDVKESYITLTEVFYKGIKDIFKAPNFITK
EECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
HGLLTFVAVLPNCNEEKVEDMKNRIQEKYKMLSLIYPQLSQYHVGYGNVTYPLDGDNVEA
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEECCCCCCHHH
LIDKLMDKMRENIKLKE
HHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MQNIIILDDMSYMRYRVKDLLEEKDIKVYETSTSFEFFNKLYEKKDNIDLIILELGLTRE
CCCEEEECCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCCEEEEEEECCCCC
DGFEVVEKIREKNVDIPIVILTKVNTRDAFAKVIREGISDYILKPFDNKVLLDRIVKTIK
CCHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
ESKASKEEVSIGKKSKVQKIYISEDNENIDKDKEEFAKGKEIADFNGIEEELPEEFKIYF
HHCCCHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHCCCCCCCCCCCHHHCCHHHEEEE
VDELNKAKTDNTKVSSVVFTLIKNTDEEEKIDVKESYITLTEVFYKGIKDIFKAPNFITK
EECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
HGLLTFVAVLPNCNEEKVEDMKNRIQEKYKMLSLIYPQLSQYHVGYGNVTYPLDGDNVEA
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEECCCCCCHHH
LIDKLMDKMRENIKLKE
HHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA