| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is feoB2 [H]
Identifier: 170757304
GI number: 170757304
Start: 927990
End: 928766
Strand: Direct
Name: feoB2 [H]
Synonym: CLD_3755
Alternate gene names: 170757304
Gene position: 927990-928766 (Clockwise)
Preceding gene: 170756247
Following gene: 170755784
Centisome position: 23.44
GC content: 31.53
Gene sequence:
>777_bases ATGGGGTTAACTTATACTTCAGGTAAAAAAGAAGCTTTAAAGGATCTCTTTAATGTAGAAAAGAATAATGAAGATGATAT TGTGGTAGCTTTAGCTGGTAATCCTAATACAGGAAAAAGCACTGTTTTCAACTCATTAACAGGGTTACATCAACATACAG GAAATTGGCCCGGAAAGACAGTAACTAATGCTCAGGGGAAATATGAACATAGGAAAATGGATTTTATATTAGTTGACTTA CCTGGAACTTATTCACTGCTTGCTAGTTCTATAGAGGAACAGGTAGCCAGGGATTTTATTTGCTTTGGAAAACCGGATGT GGTGGTTGTGGTAATAGATGCTACTTCCATAGAAAGAAATTTAAATTTGCTTCTTCAGATATTAGAAATTACTCCTAGGG TAGTGGTTTCCTTAAATTTAATGGATGAAGCAAAAAAGAGGGGAATTAAAGTTGATATAGATAAACTAAGAATTGAATTA GGAGTGCCTGTTATACCAACTGTTGCAAGAAGTAATAAAGGTATATATGAAGTAAAGGATACTGTCTATAACTTAGCTTT AGAAAATATAAAAACTAATCCAGTTAAGGTGGAATACAGTAATGAAATAGAGTGTGAAATAAAAAGAATAAGTTCTTTAT TAGAAAAAGTATTTCCCAGGGAAATATCCTTACAGTGGTTAGCTTTAAGATTATTAGATGGTGATGAGTCTATTTTAAAT TCTATAAGTAAATATTTAAATTATGATATGAAAAGCGCTTTAATAAAGGGGGATTAA
Upstream 100 bases:
>100_bases GGAAGCTTAGAGTTTAATTAAAAAATTGATATAATTTACTTGAGTAAAATTTATTTGATTTTAAATAAAATGTTTGAAAT CAAAAGAAGGGATGATGTTT
Downstream 100 bases:
>100_bases GGTGAAAAAAATAGATAAGGATGAGAGTATAAAAAATACTAAAAATAAATTAAACATAAAATATTATGATAAGATAGATG ACAAAAAATATAAAATAAGG
Product: ferrous iron transport protein B
Products: Fe (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MGLTYTSGKKEALKDLFNVEKNNEDDIVVALAGNPNTGKSTVFNSLTGLHQHTGNWPGKTVTNAQGKYEHRKMDFILVDL PGTYSLLASSIEEQVARDFICFGKPDVVVVVIDATSIERNLNLLLQILEITPRVVVSLNLMDEAKKRGIKVDIDKLRIEL GVPVIPTVARSNKGIYEVKDTVYNLALENIKTNPVKVEYSNEIECEIKRISSLLEKVFPREISLQWLALRLLDGDESILN SISKYLNYDMKSALIKGD
Sequences:
>Translated_258_residues MGLTYTSGKKEALKDLFNVEKNNEDDIVVALAGNPNTGKSTVFNSLTGLHQHTGNWPGKTVTNAQGKYEHRKMDFILVDL PGTYSLLASSIEEQVARDFICFGKPDVVVVVIDATSIERNLNLLLQILEITPRVVVSLNLMDEAKKRGIKVDIDKLRIEL GVPVIPTVARSNKGIYEVKDTVYNLALENIKTNPVKVEYSNEIECEIKRISSLLEKVFPREISLQWLALRLLDGDESILN SISKYLNYDMKSALIKGD >Mature_257_residues GLTYTSGKKEALKDLFNVEKNNEDDIVVALAGNPNTGKSTVFNSLTGLHQHTGNWPGKTVTNAQGKYEHRKMDFILVDLP GTYSLLASSIEEQVARDFICFGKPDVVVVVIDATSIERNLNLLLQILEITPRVVVSLNLMDEAKKRGIKVDIDKLRIELG VPVIPTVARSNKGIYEVKDTVYNLALENIKTNPVKVEYSNEIECEIKRISSLLEKVFPREISLQWLALRLLDGDESILNS ISKYLNYDMKSALIKGD
Specific function: Not involved in Fe(2+) uptake but is involved in manganese uptake. Could be GTP-driven [H]
COG id: COG0370
COG function: function code P; Fe2+ transport system protein B
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Escherichia coli, GI1789813, Length=216, Percent_Identity=41.2037037037037, Blast_Score=142, Evalue=2e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011640 - InterPro: IPR011619 - InterPro: IPR011642 - InterPro: IPR006073 - InterPro: IPR002917 [H]
Pfam domain/function: PF07664 FeoB_C; PF02421 FeoB_N; PF07670 Gate; PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 28835; Mature: 28703
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLTYTSGKKEALKDLFNVEKNNEDDIVVALAGNPNTGKSTVFNSLTGLHQHTGNWPGKT CCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCC VTNAQGKYEHRKMDFILVDLPGTYSLLASSIEEQVARDFICFGKPDVVVVVIDATSIERN CCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHEEECCCCCEEEEEEECCCHHHH LNLLLQILEITPRVVVSLNLMDEAKKRGIKVDIDKLRIELGVPVIPTVARSNKGIYEVKD HHHHHHHHHHCCEEEEEEEHHHHHHHCCCEEEHHHEEEEECCCCCCHHHCCCCCEEHHHH TVYNLALENIKTNPVKVEYSNEIECEIKRISSLLEKVFPREISLQWLALRLLDGDESILN HHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHH SISKYLNYDMKSALIKGD HHHHHHCCCHHHHEECCC >Mature Secondary Structure GLTYTSGKKEALKDLFNVEKNNEDDIVVALAGNPNTGKSTVFNSLTGLHQHTGNWPGKT CCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCC VTNAQGKYEHRKMDFILVDLPGTYSLLASSIEEQVARDFICFGKPDVVVVVIDATSIERN CCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHEEECCCCCEEEEEEECCCHHHH LNLLLQILEITPRVVVSLNLMDEAKKRGIKVDIDKLRIELGVPVIPTVARSNKGIYEVKD HHHHHHHHHHCCEEEEEEEHHHHHHHCCCEEEHHHEEEEECCCCCCHHHCCCCCEEHHHH TVYNLALENIKTNPVKVEYSNEIECEIKRISSLLEKVFPREISLQWLALRLLDGDESILN HHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHH SISKYLNYDMKSALIKGD HHHHHHCCCHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Fe (II) [Periplasm] [C]
Specific reaction: Fe (II) [Periplasm] = Fe (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12949112 [H]