| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is feoB
Identifier: 170755784
GI number: 170755784
Start: 928768
End: 930291
Strand: Direct
Name: feoB
Synonym: CLD_3754
Alternate gene names: 170755784
Gene position: 928768-930291 (Clockwise)
Preceding gene: 170757304
Following gene: 170755309
Centisome position: 23.46
GC content: 30.84
Gene sequence:
>1524_bases GTGAAAAAAATAGATAAGGATGAGAGTATAAAAAATACTAAAAATAAATTAAACATAAAATATTATGATAAGATAGATGA CAAAAAATATAAAATAAGGATTAAAAATGCTAAGTTAAACATAGAAACTAAAGATTCTAATAAAGATAAAGACCTAAAGG AGATTTTTAAGAACATAGAGAATTTCAAAGAGAATTACAATGAAAAAATAAGAGATGAAATAGTAAAAAGTATATATAAT AAAGCAGAAGATATTGCAGGTAATTCTGTTAAAAAGAATAGAGAAAAATTTTTATCACAACAAAAGATAGATGATATAGT AACTTCTAAAATTACAGGAATACCTATTATGCTTTTACTTTTAGCAGGGGTTTTATGGATAACCATAGAAGGAGCCAATG TATCTTCAGAACTTTTAGCTAAAATGCTTTTTTTTATAGAAGATAAGCTTACACAATTTTTTAATTATATAAATGCACCT TCCTGGCTTCATGGTATCCTAGTTTTGGGAATATATAGAACTTTAGCTTGGGTTATATCTGTAATGTTACCACCTATGGC AATCTTTTTTCCTATATTTACTCTATTAGAGGATGCAGGCTACCTTCCAAGAATAGCTTTCAATTTGGATCATGCTTTTA AGAAGGCTTGTGCTCATGGGAAACAAGCTTTAACTATGTGTATGGGATTTGGCTGTAATGCAGCTGGAGTTATTGCCTGC AGAATAATAGAATCACCAAGGGAAAGATTGATAGCTATTTTAACTAATAACTTTGTACCTTGTAATGGCAGGTTTCCTAC GTTAATAGCACTTTCTATGATCTTTGTTGGATTAAAATTTGAAGGATCCGGGGGAAGTAGTTTTATAGCAACTCTTATGA TAGTTCTTCTTGTACTTATAGGAATAGGAATAACCCTGTTGGTTTCTTATATATTATCAAAAACATTGCTAAAGGGAGTT CCATCATCCTTTACTTTGGAATTACCACCCTATAGAAAGCCCCAAATAGGGAGAGTGATATATACATCAATTATAGATAG AACTATCTTCGTATTAATGAGAGCCGTAGTAGTGGCAGCACCAGCGGGAGCTATAATATATATTCTAGGAAATATAACTG TAGGAGATAGCACTATATTGGTTCAAGTAGCTAATGCCTTGGATCCTTTTAGTAAGGCTATTGGGTTAGATGGATTTATA CTTTTAGCCTTTATATTAGGACTTCCAGCCAATGAAATAGTGCTACCAATATTAATAATGTCTTATCTATCTAAGGGAGC TATGATAGATTTTGAAAGTTTAGAACAGCTAAGAAATATACTGATTTCAAATGGGTGGACCTACTTAACTTTATTAAATA CTATGTTATTTTCCCTTTTACATTTCCCTTGTGGAACCACCATATGGACTATAAAAAAGGAAACAGGAAGTATAAAGTGG ACTATATTTTCAGTAATTATGCCTACGGTAATAGCTATAGCTGTATGCTTCTTAACAACCCAAGTTTACAATTTAATAGT ATAA
Upstream 100 bases:
>100_bases TTAGCTTTAAGATTATTAGATGGTGATGAGTCTATTTTAAATTCTATAAGTAAATATTTAAATTATGATATGAAAAGCGC TTTAATAAAGGGGGATTAAG
Downstream 100 bases:
>100_bases AATTTAAAACCAAATATATAATTTATCATTTTGTGGGAGTTACTTTAGATAAGTCCTTTTAGATTTTCTATAAGTAGAGG ATTTATTTTTAAGTAAACTC
Product: ferrous iron transport protein B
Products: Fe (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 507; Mature: 507
Protein sequence:
>507_residues MKKIDKDESIKNTKNKLNIKYYDKIDDKKYKIRIKNAKLNIETKDSNKDKDLKEIFKNIENFKENYNEKIRDEIVKSIYN KAEDIAGNSVKKNREKFLSQQKIDDIVTSKITGIPIMLLLLAGVLWITIEGANVSSELLAKMLFFIEDKLTQFFNYINAP SWLHGILVLGIYRTLAWVISVMLPPMAIFFPIFTLLEDAGYLPRIAFNLDHAFKKACAHGKQALTMCMGFGCNAAGVIAC RIIESPRERLIAILTNNFVPCNGRFPTLIALSMIFVGLKFEGSGGSSFIATLMIVLLVLIGIGITLLVSYILSKTLLKGV PSSFTLELPPYRKPQIGRVIYTSIIDRTIFVLMRAVVVAAPAGAIIYILGNITVGDSTILVQVANALDPFSKAIGLDGFI LLAFILGLPANEIVLPILIMSYLSKGAMIDFESLEQLRNILISNGWTYLTLLNTMLFSLLHFPCGTTIWTIKKETGSIKW TIFSVIMPTVIAIAVCFLTTQVYNLIV
Sequences:
>Translated_507_residues MKKIDKDESIKNTKNKLNIKYYDKIDDKKYKIRIKNAKLNIETKDSNKDKDLKEIFKNIENFKENYNEKIRDEIVKSIYN KAEDIAGNSVKKNREKFLSQQKIDDIVTSKITGIPIMLLLLAGVLWITIEGANVSSELLAKMLFFIEDKLTQFFNYINAP SWLHGILVLGIYRTLAWVISVMLPPMAIFFPIFTLLEDAGYLPRIAFNLDHAFKKACAHGKQALTMCMGFGCNAAGVIAC RIIESPRERLIAILTNNFVPCNGRFPTLIALSMIFVGLKFEGSGGSSFIATLMIVLLVLIGIGITLLVSYILSKTLLKGV PSSFTLELPPYRKPQIGRVIYTSIIDRTIFVLMRAVVVAAPAGAIIYILGNITVGDSTILVQVANALDPFSKAIGLDGFI LLAFILGLPANEIVLPILIMSYLSKGAMIDFESLEQLRNILISNGWTYLTLLNTMLFSLLHFPCGTTIWTIKKETGSIKW TIFSVIMPTVIAIAVCFLTTQVYNLIV >Mature_507_residues MKKIDKDESIKNTKNKLNIKYYDKIDDKKYKIRIKNAKLNIETKDSNKDKDLKEIFKNIENFKENYNEKIRDEIVKSIYN KAEDIAGNSVKKNREKFLSQQKIDDIVTSKITGIPIMLLLLAGVLWITIEGANVSSELLAKMLFFIEDKLTQFFNYINAP SWLHGILVLGIYRTLAWVISVMLPPMAIFFPIFTLLEDAGYLPRIAFNLDHAFKKACAHGKQALTMCMGFGCNAAGVIAC RIIESPRERLIAILTNNFVPCNGRFPTLIALSMIFVGLKFEGSGGSSFIATLMIVLLVLIGIGITLLVSYILSKTLLKGV PSSFTLELPPYRKPQIGRVIYTSIIDRTIFVLMRAVVVAAPAGAIIYILGNITVGDSTILVQVANALDPFSKAIGLDGFI LLAFILGLPANEIVLPILIMSYLSKGAMIDFESLEQLRNILISNGWTYLTLLNTMLFSLLHFPCGTTIWTIKKETGSIKW TIFSVIMPTVIAIAVCFLTTQVYNLIV
Specific function: Not involved in Fe(2+) uptake but is involved in manganese uptake. Could be GTP-driven [H]
COG id: COG0370
COG function: function code P; Fe2+ transport system protein B
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Escherichia coli, GI1789813, Length=278, Percent_Identity=26.6187050359712, Blast_Score=101, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011640 - InterPro: IPR011619 - InterPro: IPR011642 - InterPro: IPR006073 - InterPro: IPR002917 [H]
Pfam domain/function: PF07664 FeoB_C; PF02421 FeoB_N; PF07670 Gate; PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 56604; Mature: 56604
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIDKDESIKNTKNKLNIKYYDKIDDKKYKIRIKNAKLNIETKDSNKDKDLKEIFKNIE CCCCCCCHHHHHHHHHCCEEEECCCCCCEEEEEEECCEEEEEECCCCCCCHHHHHHHHHH NFKENYNEKIRDEIVKSIYNKAEDIAGNSVKKNREKFLSQQKIDDIVTSKITGIPIMLLL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH LAGVLWITIEGANVSSELLAKMLFFIEDKLTQFFNYINAPSWLHGILVLGIYRTLAWVIS HHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH VMLPPMAIFFPIFTLLEDAGYLPRIAFNLDHAFKKACAHGKQALTMCMGFGCNAAGVIAC HHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH RIIESPRERLIAILTNNFVPCNGRFPTLIALSMIFVGLKFEGSGGSSFIATLMIVLLVLI HHHHCHHHHHHHHHHCCEECCCCCCHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHH GIGITLLVSYILSKTLLKGVPSSFTLELPPYRKPQIGRVIYTSIIDRTIFVLMRAVVVAA HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC PAGAIIYILGNITVGDSTILVQVANALDPFSKAIGLDGFILLAFILGLPANEIVLPILIM CCCEEEEEEECEEECCCHHHHHHHHHHCHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHH SYLSKGAMIDFESLEQLRNILISNGWTYLTLLNTMLFSLLHFPCGTTIWTIKKETGSIKW HHHCCCCEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHH TIFSVIMPTVIAIAVCFLTTQVYNLIV HHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKKIDKDESIKNTKNKLNIKYYDKIDDKKYKIRIKNAKLNIETKDSNKDKDLKEIFKNIE CCCCCCCHHHHHHHHHCCEEEECCCCCCEEEEEEECCEEEEEECCCCCCCHHHHHHHHHH NFKENYNEKIRDEIVKSIYNKAEDIAGNSVKKNREKFLSQQKIDDIVTSKITGIPIMLLL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH LAGVLWITIEGANVSSELLAKMLFFIEDKLTQFFNYINAPSWLHGILVLGIYRTLAWVIS HHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH VMLPPMAIFFPIFTLLEDAGYLPRIAFNLDHAFKKACAHGKQALTMCMGFGCNAAGVIAC HHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH RIIESPRERLIAILTNNFVPCNGRFPTLIALSMIFVGLKFEGSGGSSFIATLMIVLLVLI HHHHCHHHHHHHHHHCCEECCCCCCHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHH GIGITLLVSYILSKTLLKGVPSSFTLELPPYRKPQIGRVIYTSIIDRTIFVLMRAVVVAA HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC PAGAIIYILGNITVGDSTILVQVANALDPFSKAIGLDGFILLAFILGLPANEIVLPILIM CCCEEEEEEECEEECCCHHHHHHHHHHCHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHH SYLSKGAMIDFESLEQLRNILISNGWTYLTLLNTMLFSLLHFPCGTTIWTIKKETGSIKW HHHCCCCEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHH TIFSVIMPTVIAIAVCFLTTQVYNLIV HHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Fe (II) [Periplasm] [C]
Specific reaction: Fe (II) [Periplasm] = Fe (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12949112 [H]