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The map label for this gene is yebC [C]

Identifier: 170757190

GI number: 170757190

Start: 3317093

End: 3317833

Strand: Reverse

Name: yebC [C]

Synonym: CLD_1467

Alternate gene names: 170757190

Gene position: 3317833-3317093 (Counterclockwise)

Preceding gene: 170756142

Following gene: 170755449

Centisome position: 83.82

GC content: 35.76

Gene sequence:

>741_bases
ATGTCAGGACATTCAAAATGGCATAACATACAAGCTAAAAAAGGTAAAGCGGATGCTAAAAGAGGAAAGATTTTTACTAA
AATAGGTAAAGAAATTGTGGTAGCAGTTAAGCAAGGAGGTCCAAGTGCGGACTCAAATCCAAGACTTAGAGACGTTATTG
CAAAAGCAAAGGCTAATAATATGCCAAATGATACAATAGAAAGATCTATAAAGAAGGCGTCAGGAGAACTTAATGCTGTA
GATTATGAAACTATTACATATGAAGGATATGGTCCAGCAGGTATAGCAGTTCTAGTTGATGTGTTAACAGATAACAAAAA
TAGAAGTGCAGGAAATGTAAGATATGCTTTTACAAAGCAAGGCGGAAACATGGGTTCAACAGGTTGCGTATCATTTATGT
TCCAATCTAAGGGTCAAATCGTTATAGAAAAGAAAGATGGCTTAGATGAAGATGAACTTATGATGATGGCATTAGATGCA
GGAGCAGAAGACTTTGAGTCAGAAGATGAGGTTTATGTTGTGGCAACTTCTCAAGAGGATTTTGGAACAGTTAGAGAAGC
TCTAGAAGCAGAAGGATTAGAATTTTTAGAAGCAGAAATTAAGATGGTTCCAGATACATATACAGCAATAGACGAAGATA
CAGCAACTAAATTTCAAAAGATGCTAGATGTTTTAGAAGATGATGATGATGTACAAAATGTTTATCATAATGCGGAATTC
CCTGAAGGATGGGAAGAGTAA

Upstream 100 bases:

>100_bases
TTAAATATTAGTATTTTCAATTATAAATATACTAATAAAAATAGTTTTAAAAATAGAATTGATATAAATTTTTCTATTAA
TAAGGTTGGGAGGAAATAAC

Downstream 100 bases:

>100_bases
TAATGTAAGGAAAGTGCGATGCACTTTCCTTATTTAGATTACAGAGTATAATGAACAGAGAACAAATAAGGAAGATTTTA
CTCCACTCTGTTACGTAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MSGHSKWHNIQAKKGKADAKRGKIFTKIGKEIVVAVKQGGPSADSNPRLRDVIAKAKANNMPNDTIERSIKKASGELNAV
DYETITYEGYGPAGIAVLVDVLTDNKNRSAGNVRYAFTKQGGNMGSTGCVSFMFQSKGQIVIEKKDGLDEDELMMMALDA
GAEDFESEDEVYVVATSQEDFGTVREALEAEGLEFLEAEIKMVPDTYTAIDEDTATKFQKMLDVLEDDDDVQNVYHNAEF
PEGWEE

Sequences:

>Translated_246_residues
MSGHSKWHNIQAKKGKADAKRGKIFTKIGKEIVVAVKQGGPSADSNPRLRDVIAKAKANNMPNDTIERSIKKASGELNAV
DYETITYEGYGPAGIAVLVDVLTDNKNRSAGNVRYAFTKQGGNMGSTGCVSFMFQSKGQIVIEKKDGLDEDELMMMALDA
GAEDFESEDEVYVVATSQEDFGTVREALEAEGLEFLEAEIKMVPDTYTAIDEDTATKFQKMLDVLEDDDDVQNVYHNAEF
PEGWEE
>Mature_245_residues
SGHSKWHNIQAKKGKADAKRGKIFTKIGKEIVVAVKQGGPSADSNPRLRDVIAKAKANNMPNDTIERSIKKASGELNAVD
YETITYEGYGPAGIAVLVDVLTDNKNRSAGNVRYAFTKQGGNMGSTGCVSFMFQSKGQIVIEKKDGLDEDELMMMALDAG
AEDFESEDEVYVVATSQEDFGTVREALEAEGLEFLEAEIKMVPDTYTAIDEDTATKFQKMLDVLEDDDDVQNVYHNAEFP
EGWEE

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family

Homologues:

Organism=Homo sapiens, GI27545315, Length=247, Percent_Identity=29.1497975708502, Blast_Score=126, Evalue=2e-29,
Organism=Escherichia coli, GI1788171, Length=243, Percent_Identity=49.3827160493827, Blast_Score=240, Evalue=6e-65,
Organism=Escherichia coli, GI1788294, Length=238, Percent_Identity=39.0756302521008, Blast_Score=150, Evalue=7e-38,
Organism=Caenorhabditis elegans, GI17556100, Length=243, Percent_Identity=28.3950617283951, Blast_Score=94, Evalue=5e-20,
Organism=Saccharomyces cerevisiae, GI6321458, Length=266, Percent_Identity=35.3383458646617, Blast_Score=118, Evalue=7e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1467_CLOBK (B1IMF6)

Other databases:

- EMBL:   CP000939
- RefSeq:   YP_001782708.1
- ProteinModelPortal:   B1IMF6
- SMR:   B1IMF6
- GeneID:   6150233
- GenomeReviews:   CP000939_GR
- KEGG:   cbb:CLD_1467
- HOGENOM:   HBG715231
- OMA:   VYANFDI
- ProtClustDB:   PRK00110
- BioCyc:   CBOT498213:CLD_1467-MONOMER
- HAMAP:   MF_00693
- InterPro:   IPR002876
- InterPro:   IPR017856
- Gene3D:   G3DSA:1.10.10.200
- PANTHER:   PTHR12532
- TIGRFAMs:   TIGR01033

Pfam domain/function: PF01709 DUF28; SSF75625 DUF28

EC number: NA

Molecular weight: Translated: 27050; Mature: 26919

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGHSKWHNIQAKKGKADAKRGKIFTKIGKEIVVAVKQGGPSADSNPRLRDVIAKAKANN
CCCCCCCCCCCCCCCCCCHHHCHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCC
MPNDTIERSIKKASGELNAVDYETITYEGYGPAGIAVLVDVLTDNKNRSAGNVRYAFTKQ
CCCHHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEC
GGNMGSTGCVSFMFQSKGQIVIEKKDGLDEDELMMMALDAGAEDFESEDEVYVVATSQED
CCCCCCHHHHHHHCCCCCCEEEECCCCCCHHHEEEEEECCCCCCCCCCCCEEEEEECCHH
FGTVREALEAEGLEFLEAEIKMVPDTYTAIDEDTATKFQKMLDVLEDDDDVQNVYHNAEF
HHHHHHHHHHCCHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCC
PEGWEE
CCCCCC
>Mature Secondary Structure 
SGHSKWHNIQAKKGKADAKRGKIFTKIGKEIVVAVKQGGPSADSNPRLRDVIAKAKANN
CCCCCCCCCCCCCCCCCHHHCHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCC
MPNDTIERSIKKASGELNAVDYETITYEGYGPAGIAVLVDVLTDNKNRSAGNVRYAFTKQ
CCCHHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEC
GGNMGSTGCVSFMFQSKGQIVIEKKDGLDEDELMMMALDAGAEDFESEDEVYVVATSQED
CCCCCCHHHHHHHCCCCCCEEEECCCCCCHHHEEEEEECCCCCCCCCCCCEEEEEECCHH
FGTVREALEAEGLEFLEAEIKMVPDTYTAIDEDTATKFQKMLDVLEDDDDVQNVYHNAEF
HHHHHHHHHHCCHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCC
PEGWEE
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA