Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170755449

Identifier: 170755449

GI number: 170755449

Start: 3316104

End: 3316715

Strand: Reverse

Name: 170755449

Synonym: CLD_1468

Alternate gene names: NA

Gene position: 3316715-3316104 (Counterclockwise)

Preceding gene: 170757190

Following gene: 170754638

Centisome position: 83.79

GC content: 26.8

Gene sequence:

>612_bases
ATGGATGTAAAAAGAAGAAATATTATAATTATAGTTGTTTCATTGTTTGTGTTATTTGTATCTGTTTACTATATAACTTC
AATAAAGTTAAGAAATAATGAGGTAGATAGCAGTAAAAGACAAGTTAAACAAGAGGATATAAAAGAAGATTCTTTAGCTG
TAGGTAGTACGGGAAATGAAGTCTTAGATAAAGATTCTAAAATAATATTTAAGATAAAATATAAAAAGAGCGGAGATACC
ATAACTGTAAGGGAAACAAAAGTATTAGATAATGTAGAGTTAGTTGGAAAAGGCAAAGAAGAGATCGAAAAGATATATTC
TAAAGAAGGATATAAAGTTGAAGAATTTAAAGATCATATATTGTCTCTTGTTAAAGAAGAAGATAAATATATGCCTAATA
AATATGTTGTAGGTATAAAAGGTGATAATATAGCTATTTATAGGACAGATGAAAATGGAAATATGTACATAGAGGATGAA
AATAAAGATATAACAGATATAAAAACAAACAAATTAAAAGAACAAGATATTCATATGTTAACTGCTGGAGATAAATATTT
TCAATGTGATACAAGGGAAGAAGCGGAAGCACGCCTTGAAGACTATGAATAG

Upstream 100 bases:

>100_bases
TTGTACTCTATACTCTGTACTCTGAAAAATGCGTCACAATTTCCCTATTTAGTGAATAAGAGTTTGGATATTTGTCCATA
ATATTCCTAGGAGGGATATT

Downstream 100 bases:

>100_bases
GACTATTTAAATAAAGTTTGTTATAATTTATTATAGTAATATTAATATAAAAAAAACGAATATTGGAAATATAGCTTGCA
TTTACACTAACATGCAAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MDVKRRNIIIIVVSLFVLFVSVYYITSIKLRNNEVDSSKRQVKQEDIKEDSLAVGSTGNEVLDKDSKIIFKIKYKKSGDT
ITVRETKVLDNVELVGKGKEEIEKIYSKEGYKVEEFKDHILSLVKEEDKYMPNKYVVGIKGDNIAIYRTDENGNMYIEDE
NKDITDIKTNKLKEQDIHMLTAGDKYFQCDTREEAEARLEDYE

Sequences:

>Translated_203_residues
MDVKRRNIIIIVVSLFVLFVSVYYITSIKLRNNEVDSSKRQVKQEDIKEDSLAVGSTGNEVLDKDSKIIFKIKYKKSGDT
ITVRETKVLDNVELVGKGKEEIEKIYSKEGYKVEEFKDHILSLVKEEDKYMPNKYVVGIKGDNIAIYRTDENGNMYIEDE
NKDITDIKTNKLKEQDIHMLTAGDKYFQCDTREEAEARLEDYE
>Mature_203_residues
MDVKRRNIIIIVVSLFVLFVSVYYITSIKLRNNEVDSSKRQVKQEDIKEDSLAVGSTGNEVLDKDSKIIFKIKYKKSGDT
ITVRETKVLDNVELVGKGKEEIEKIYSKEGYKVEEFKDHILSLVKEEDKYMPNKYVVGIKGDNIAIYRTDENGNMYIEDE
NKDITDIKTNKLKEQDIHMLTAGDKYFQCDTREEAEARLEDYE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23596; Mature: 23596

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVKRRNIIIIVVSLFVLFVSVYYITSIKLRNNEVDSSKRQVKQEDIKEDSLAVGSTGNE
CCCCCCCEEEEHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHCCCCCEEECCCCCH
VLDKDSKIIFKIKYKKSGDTITVRETKVLDNVELVGKGKEEIEKIYSKEGYKVEEFKDHI
HHCCCCEEEEEEEEECCCCEEEEEEEEECCCEEEECCCHHHHHHHHCCCCCCHHHHHHHH
LSLVKEEDKYMPNKYVVGIKGDNIAIYRTDENGNMYIEDENKDITDIKTNKLKEQDIHML
HHHHHHHHHCCCCEEEEEEECCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCEEEE
TAGDKYFQCDTREEAEARLEDYE
ECCCCEEECCCCHHHHHHCCCCC
>Mature Secondary Structure
MDVKRRNIIIIVVSLFVLFVSVYYITSIKLRNNEVDSSKRQVKQEDIKEDSLAVGSTGNE
CCCCCCCEEEEHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHCCCCCEEECCCCCH
VLDKDSKIIFKIKYKKSGDTITVRETKVLDNVELVGKGKEEIEKIYSKEGYKVEEFKDHI
HHCCCCEEEEEEEEECCCCEEEEEEEEECCCEEEECCCHHHHHHHHCCCCCCHHHHHHHH
LSLVKEEDKYMPNKYVVGIKGDNIAIYRTDENGNMYIEDENKDITDIKTNKLKEQDIHML
HHHHHHHHHCCCCEEEEEEECCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCEEEE
TAGDKYFQCDTREEAEARLEDYE
ECCCCEEECCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA