| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is fruA [H]
Identifier: 170757049
GI number: 170757049
Start: 2135867
End: 2136307
Strand: Reverse
Name: fruA [H]
Synonym: CLD_2634
Alternate gene names: 170757049
Gene position: 2136307-2135867 (Counterclockwise)
Preceding gene: 170756738
Following gene: 170756497
Centisome position: 53.97
GC content: 28.57
Gene sequence:
>441_bases ATGGAATTAAATGAATTAATAAAAGAAAGCACTATAGAATTAAATGTAGCGGCAAAGGATAAAGAGGATCTTATTAATAA AATGATTGATGTTTTAGTAAAAGATGGAGCAGTTCTTGATAAGGATAAATTTAAAGAGGATATTTATCATAGGGAATCTT TAAGTAATACAGGCATAGGTTTTGGAATTGCTATACCACATGCTAAATCTATAGCTGTAAAGGAACCTCGTATTGCAGTA GGGATACTTAAAGATACTGTGGATTATGATTCAATAGACGGAGATCCAGTAAATATGATATTCATGATAGCAGTAAATGA TATGCAAAGTGATCTTCATCTAAAAGCATTAGCTAACTTATCAAGAAAATTAATGCATGAAGATTTCAGAGGAAAGATCT TAAATGTAAAATCAAAATCTGAAATATTAGAAATAATTTAA
Upstream 100 bases:
>100_bases TAATTATAATTTATAATAGCATTGAAGAATATTGTTAAACTTAAGATAAAAAAACAATAATTTACAAGGTATCTAAGATA AGGGGATGAATAAAATAATT
Downstream 100 bases:
>100_bases GTTGCTTATAAACAGAGTTCTTGGCTTCAGAGGGAGTTTTTACTCCCACTAAAGATTAGGAAATGGTTATCCAGAGACAT AGCCGCTCTTTACCCCACTT
Product: PTS system, fructose family, IIA component
Products: NA
Alternate protein names: EIIABC-Fru; Fructose-specific phosphotransferase enzyme IIA component; EII-Fru; PTS system fructose-specific EIIA component; Fructose-specific phosphotransferase enzyme IIB component; EIII-Fru; PTS system fructose-specific EIIB component; Fructose permease IIC component; PTS system fructose-specific EIIC component [H]
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MELNELIKESTIELNVAAKDKEDLINKMIDVLVKDGAVLDKDKFKEDIYHRESLSNTGIGFGIAIPHAKSIAVKEPRIAV GILKDTVDYDSIDGDPVNMIFMIAVNDMQSDLHLKALANLSRKLMHEDFRGKILNVKSKSEILEII
Sequences:
>Translated_146_residues MELNELIKESTIELNVAAKDKEDLINKMIDVLVKDGAVLDKDKFKEDIYHRESLSNTGIGFGIAIPHAKSIAVKEPRIAV GILKDTVDYDSIDGDPVNMIFMIAVNDMQSDLHLKALANLSRKLMHEDFRGKILNVKSKSEILEII >Mature_146_residues MELNELIKESTIELNVAAKDKEDLINKMIDVLVKDGAVLDKDKFKEDIYHRESLSNTGIGFGIAIPHAKSIAVKEPRIAV GILKDTVDYDSIDGDPVNMIFMIAVNDMQSDLHLKALANLSRKLMHEDFRGKILNVKSKSEILEII
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1762
COG function: function code GT; Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-2 domain [H]
Homologues:
Organism=Escherichia coli, GI1786951, Length=148, Percent_Identity=28.3783783783784, Blast_Score=82, Evalue=2e-17, Organism=Escherichia coli, GI48994992, Length=142, Percent_Identity=30.2816901408451, Blast_Score=79, Evalue=1e-16, Organism=Escherichia coli, GI2367327, Length=123, Percent_Identity=26.8292682926829, Blast_Score=79, Evalue=1e-16, Organism=Escherichia coli, GI1788726, Length=127, Percent_Identity=28.3464566929134, Blast_Score=69, Evalue=9e-14, Organism=Escherichia coli, GI1789597, Length=105, Percent_Identity=34.2857142857143, Blast_Score=60, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016152 - InterPro: IPR002178 - InterPro: IPR013011 - InterPro: IPR003501 - InterPro: IPR003352 - InterPro: IPR013014 - InterPro: IPR004715 - InterPro: IPR003353 - InterPro: IPR006327 [H]
Pfam domain/function: PF00359 PTS_EIIA_2; PF02378 PTS_EIIC; PF02302 PTS_IIB [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 16346; Mature: 16346
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: PS00372 PTS_EIIA_TYPE_2_HIS ; PS51094 PTS_EIIA_TYPE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELNELIKESTIELNVAAKDKEDLINKMIDVLVKDGAVLDKDKFKEDIYHRESLSNTGIG CCHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCE FGIAIPHAKSIAVKEPRIAVGILKDTVDYDSIDGDPVNMIFMIAVNDMQSDLHLKALANL EEEECCCCCCEEECCCCEEEEEHHHCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHH SRKLMHEDFRGKILNVKSKSEILEII HHHHHHHHHCCEEECCCCHHHHHHCC >Mature Secondary Structure MELNELIKESTIELNVAAKDKEDLINKMIDVLVKDGAVLDKDKFKEDIYHRESLSNTGIG CCHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCE FGIAIPHAKSIAVKEPRIAVGILKDTVDYDSIDGDPVNMIFMIAVNDMQSDLHLKALANL EEEECCCCCCEEECCCCEEEEEHHHCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHH SRKLMHEDFRGKILNVKSKSEILEII HHHHHHHHHCCEEECCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]