| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is fruA [H]
Identifier: 170756738
GI number: 170756738
Start: 2136587
End: 2137984
Strand: Reverse
Name: fruA [H]
Synonym: CLD_2633
Alternate gene names: 170756738
Gene position: 2137984-2136587 (Counterclockwise)
Preceding gene: 170757758
Following gene: 170757049
Centisome position: 54.01
GC content: 34.48
Gene sequence:
>1398_bases ATGAAAAAGATTATTGCTGTTACAGGATGCCCTACAGGAATAGCTCATACATTTATGGCAGAAGAAGCATTAAAGAAAGC AGCTAAAGAATTAGGAGTAGACATAAAAGTAGAAACTAATGGTGCTGTTGGAGTAGAAAATGAATTAACAGAAAAGGATA TAGAAGAAGCAATTGGAGTAATAGTAGCATCAGATAAAGATGTTAGAGCTGATAGATTTACAGGAAGACCAACTATAGAA ACTTCAGTAGCAGATGGAATTCGTAAACCTAAAGAGTTAATTCAAGCTATATTAGATGAAAAGGCTCCTATAAAAGGAGG AGCAGCAGCTAAAAAAACTATAAAGAAAAGCTTAGAAGAAGTTCCGGGTAAAAAATCTGTAACTAGAGATATATATAAAC ACTTAATGAATGGTGTATCTCATATGTTACCTTTTGTTGTAGCAGGTGGTGTACTTATAGCTATATCTTTCCTATGGGGA ATATATTCTTTTGAGCCAAAATCAGCACAATATAATCCTATAGCAGCTATGATTAAGGGAATAGGTGGAGAAGCATTTGC AATAATAGTTCCAATATTTACAGCTTATATTGCAGATTCTATTTCTGGAAGACCAGGTATGGTAGCGGGATTTGTTGGTG GACTTATAGCAAATACTACAGGATCAGGATTTTTAGGAGGTATCATTGCAGGTTTCTTCGCTGGATATTTGATGCTTTAT TTTAAAAAACTACTTTCAGGATTACCAAAACAATTTGAGGGTTTAAAATCAATATTTATATTACCAATAATCGGAATATT AATAACAGGCGTACTAATGACACTATTAGGTGAACCAGTAGCAGCTTTAAATAAGGGCGTTATGGCATGGCTTGCATCGC TTGAACAAGCAAATCCAATTTTATTAGGAATAATTATAGGTTGTATGTCTGCCTTCGACTTTGGTGGACCAGTAAATAAA GCCGCTTACCTAACAGGTACAATGCTACTTGCACAAGGAAATTATTATTTCATGGCTGGTGTTTCAGCAGCTTGTATAAC ACCACCACTTGTAATAGCTTTATCAACAACATTCTTTAAAAGTAGATTTGACGAAGAAGAAAGAGCAGCAGGTTTAGTTA ATTATATCTTAGGTTGTACTCATATAACAGAAGGAGCAATTCCTTTCGCAGCGAAAGATCCATTAAGGGTTATTCCAATA TTAATGGTTGGATCTTCTGTATCTTCTGTATTAACTTATTTAATGAAGATTCAAGTACCAGCTCCTCATGGTGGATTTTT AATACTACCATTAGTTAGTAAACCATTACTATGGGTAGCTGCGATATTAGTAGGGTCAACAGTAGGCGCAATATTATATG GAATATACAGAGGATATATGCAGAAGAAAGCTCAATAA
Upstream 100 bases:
>100_bases ATCAGCCACTGGTGCAAATGTTGCTGAATCAAGTGCATTAGGAACTTTTGGTAAAGTATCGGAGTATATAAAAAAAATAC ATGTTAAGGAGGTAGTGTAA
Downstream 100 bases:
>100_bases AAAAGTTAGGCAGTGATTATCTGGGGTGGTAGCAGATCTTATGTCAAACTTTAGAAAAGCAGTTATCAAAAAAATCTAGG ATCTTGTGATAGTAATTTTC
Product: PTS system, fructose family, IIBC component
Products: NA
Alternate protein names: EIIABC-Fru; Fructose-specific phosphotransferase enzyme IIA component; EII-Fru; PTS system fructose-specific EIIA component; Fructose-specific phosphotransferase enzyme IIB component; EIII-Fru; PTS system fructose-specific EIIB component; Fructose permease IIC component; PTS system fructose-specific EIIC component [H]
Number of amino acids: Translated: 465; Mature: 465
Protein sequence:
>465_residues MKKIIAVTGCPTGIAHTFMAEEALKKAAKELGVDIKVETNGAVGVENELTEKDIEEAIGVIVASDKDVRADRFTGRPTIE TSVADGIRKPKELIQAILDEKAPIKGGAAAKKTIKKSLEEVPGKKSVTRDIYKHLMNGVSHMLPFVVAGGVLIAISFLWG IYSFEPKSAQYNPIAAMIKGIGGEAFAIIVPIFTAYIADSISGRPGMVAGFVGGLIANTTGSGFLGGIIAGFFAGYLMLY FKKLLSGLPKQFEGLKSIFILPIIGILITGVLMTLLGEPVAALNKGVMAWLASLEQANPILLGIIIGCMSAFDFGGPVNK AAYLTGTMLLAQGNYYFMAGVSAACITPPLVIALSTTFFKSRFDEEERAAGLVNYILGCTHITEGAIPFAAKDPLRVIPI LMVGSSVSSVLTYLMKIQVPAPHGGFLILPLVSKPLLWVAAILVGSTVGAILYGIYRGYMQKKAQ
Sequences:
>Translated_465_residues MKKIIAVTGCPTGIAHTFMAEEALKKAAKELGVDIKVETNGAVGVENELTEKDIEEAIGVIVASDKDVRADRFTGRPTIE TSVADGIRKPKELIQAILDEKAPIKGGAAAKKTIKKSLEEVPGKKSVTRDIYKHLMNGVSHMLPFVVAGGVLIAISFLWG IYSFEPKSAQYNPIAAMIKGIGGEAFAIIVPIFTAYIADSISGRPGMVAGFVGGLIANTTGSGFLGGIIAGFFAGYLMLY FKKLLSGLPKQFEGLKSIFILPIIGILITGVLMTLLGEPVAALNKGVMAWLASLEQANPILLGIIIGCMSAFDFGGPVNK AAYLTGTMLLAQGNYYFMAGVSAACITPPLVIALSTTFFKSRFDEEERAAGLVNYILGCTHITEGAIPFAAKDPLRVIPI LMVGSSVSSVLTYLMKIQVPAPHGGFLILPLVSKPLLWVAAILVGSTVGAILYGIYRGYMQKKAQ >Mature_465_residues MKKIIAVTGCPTGIAHTFMAEEALKKAAKELGVDIKVETNGAVGVENELTEKDIEEAIGVIVASDKDVRADRFTGRPTIE TSVADGIRKPKELIQAILDEKAPIKGGAAAKKTIKKSLEEVPGKKSVTRDIYKHLMNGVSHMLPFVVAGGVLIAISFLWG IYSFEPKSAQYNPIAAMIKGIGGEAFAIIVPIFTAYIADSISGRPGMVAGFVGGLIANTTGSGFLGGIIAGFFAGYLMLY FKKLLSGLPKQFEGLKSIFILPIIGILITGVLMTLLGEPVAALNKGVMAWLASLEQANPILLGIIIGCMSAFDFGGPVNK AAYLTGTMLLAQGNYYFMAGVSAACITPPLVIALSTTFFKSRFDEEERAAGLVNYILGCTHITEGAIPFAAKDPLRVIPI LMVGSSVSSVLTYLMKIQVPAPHGGFLILPLVSKPLLWVAAILVGSTVGAILYGIYRGYMQKKAQ
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1299
COG function: function code G; Phosphotransferase system, fructose-specific IIC component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-2 domain [H]
Homologues:
Organism=Escherichia coli, GI1788492, Length=461, Percent_Identity=41.8655097613883, Blast_Score=343, Evalue=1e-95, Organism=Escherichia coli, GI1786951, Length=472, Percent_Identity=36.228813559322, Blast_Score=263, Evalue=1e-71, Organism=Escherichia coli, GI1790386, Length=312, Percent_Identity=40.3846153846154, Blast_Score=219, Evalue=2e-58, Organism=Escherichia coli, GI87082348, Length=433, Percent_Identity=31.8706697459584, Blast_Score=201, Evalue=6e-53, Organism=Escherichia coli, GI1788729, Length=404, Percent_Identity=26.7326732673267, Blast_Score=113, Evalue=2e-26, Organism=Escherichia coli, GI1790387, Length=98, Percent_Identity=43.8775510204082, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1788730, Length=99, Percent_Identity=42.4242424242424, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1790390, Length=98, Percent_Identity=33.6734693877551, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016152 - InterPro: IPR002178 - InterPro: IPR013011 - InterPro: IPR003501 - InterPro: IPR003352 - InterPro: IPR013014 - InterPro: IPR004715 - InterPro: IPR003353 - InterPro: IPR006327 [H]
Pfam domain/function: PF00359 PTS_EIIA_2; PF02378 PTS_EIIC; PF02302 PTS_IIB [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 49218; Mature: 49218
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: PS51099 PTS_EIIB_TYPE_2 ; PS51104 PTS_EIIC_TYPE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIIAVTGCPTGIAHTFMAEEALKKAAKELGVDIKVETNGAVGVENELTEKDIEEAIGV CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHCE IVASDKDVRADRFTGRPTIETSVADGIRKPKELIQAILDEKAPIKGGAAAKKTIKKSLEE EEECCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH VPGKKSVTRDIYKHLMNGVSHMLPFVVAGGVLIAISFLWGIYSFEPKSAQYNPIAAMIKG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHC IGGEAFAIIVPIFTAYIADSISGRPGMVAGFVGGLIANTTGSGFLGGIIAGFFAGYLMLY CCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH FKKLLSGLPKQFEGLKSIFILPIIGILITGVLMTLLGEPVAALNKGVMAWLASLEQANPI HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCH LLGIIIGCMSAFDFGGPVNKAAYLTGTMLLAQGNYYFMAGVSAACITPPLVIALSTTFFK HHHHHHHHHHHHCCCCCCCHHHHHHHEEEEECCCEEEEECCCHHHHCCHHHHHHHHHHHH SRFDEEERAAGLVNYILGCTHITEGAIPFAAKDPLRVIPILMVGSSVSSVLTYLMKIQVP HHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCC APHGGFLILPLVSKPLLWVAAILVGSTVGAILYGIYRGYMQKKAQ CCCCCEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKIIAVTGCPTGIAHTFMAEEALKKAAKELGVDIKVETNGAVGVENELTEKDIEEAIGV CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHCE IVASDKDVRADRFTGRPTIETSVADGIRKPKELIQAILDEKAPIKGGAAAKKTIKKSLEE EEECCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH VPGKKSVTRDIYKHLMNGVSHMLPFVVAGGVLIAISFLWGIYSFEPKSAQYNPIAAMIKG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHC IGGEAFAIIVPIFTAYIADSISGRPGMVAGFVGGLIANTTGSGFLGGIIAGFFAGYLMLY CCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH FKKLLSGLPKQFEGLKSIFILPIIGILITGVLMTLLGEPVAALNKGVMAWLASLEQANPI HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCH LLGIIIGCMSAFDFGGPVNKAAYLTGTMLLAQGNYYFMAGVSAACITPPLVIALSTTFFK HHHHHHHHHHHHCCCCCCCHHHHHHHEEEEECCCEEEEECCCHHHHCCHHHHHHHHHHHH SRFDEEERAAGLVNYILGCTHITEGAIPFAAKDPLRVIPILMVGSSVSSVLTYLMKIQVP HHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCC APHGGFLILPLVSKPLLWVAAILVGSTVGAILYGIYRGYMQKKAQ CCCCCEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]