Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

Click here to switch to the map view.

The map label for this gene is sagC

Identifier: 170757045

GI number: 170757045

Start: 603185

End: 604267

Strand: Direct

Name: sagC

Synonym: CLD_0260

Alternate gene names: NA

Gene position: 603185-604267 (Clockwise)

Preceding gene: 170756767

Following gene: 170755485

Centisome position: 15.24

GC content: 24.84

Gene sequence:

>1083_bases
ATGAAAAATAACACTATATATAGATTAAGTAATAATTTAAGAATATACGATAATGGTGAAAATGAAATAAGATTTAGAAG
TGGACTTTGGAATTACAATGAAGCGGTTTTAGACTTGAGCGCTGAAACAGAAAATTTTACAAAGTATTTTAGGAAAGTTA
TTGATAATCTAAAAAACAATAAGGGCATATCAGTAAAGGATTTAGATGGATATGAATTAAACAATGAAGAAAAAAATAAT
TTAATTAGTATTATAGATTCCTTAAATGAAGCTGGTATGTTATGTAGTGAAGATGAAAAAGATAATGACTTTGCAATGTC
CAAAATATTATTAGGAGATTTTAGCTATAATCTTAATAAAAAGGAAGAAAATAATCAAAAGCTATTATTTATATCAGATA
ATGATTATGCAAAACAAACTGCTAAAAATTTATCCGATGGGATGAATATAAATTTAGATTTGTATTCAAAAGAAAATATA
GATAATATAATTTCTAAAGATTTAACATCAAATTTAGATGCCCTAGAAAAAAAATCTAATATAGATGATATAAAAAATCA
ATTAAAAAATTATTCGGCTATATTAATATGCATGAGTCATATTAACATGAATTTATTTAGAAATATAAATAGAGTATCTA
TAGAACTAAAAAAACCTATTATTATGTCTTTTATTGATGGACCTTTTATAACTACTTTAAGTACATTGCCACCTAAAACC
GGCTGTTTAGAGTGCTTTGAGCAAAGAATCTTATCAAGACTTGAAGATCATGTTTTATATCACAAATTTATAGAAAGTGA
TTTTAACCCTAGTGATAAATCTCATAAATCCATAATTCCTTTATTAAATATTATGACTAACATGGTCATATCTGAAGGAT
TTTTAATAAACAATTTTAATACCTGCAAAATTGAAGGTAGAGTACTTAGTATATTTGTTCCAACATTAGAAATACAATCT
CAAGACCTATTGAGAGTTCCATTTTGCCCAGCTTGCGGAAATATATCAAAGGCTAAATTGAAAGAAATAAACATATCTAC
TAGGAATATTGTGGATGGAATTTTAGAAGATATTAATTCTTAA

Upstream 100 bases:

>100_bases
ATATGAAAAACAATACATAGAAGAGGTTTTAAATATAGATGGAGTATTAAAACACGTAGTACATATGACTGTTGTAGGTT
CAGAACAGGGGGATTAATTT

Downstream 100 bases:

>100_bases
CTAGGAGGCTTTAACATGATAAAATTTTTCCCAAGTTTTAATAATATATTAGAGAATTTTAAATCATTAGCAGGAAATCA
AAGTGGTATATTAGAGGCTA

Product: streptolysin associated protein SagC

Products: NA

Alternate protein names: Streptolysin S Biosynthesis Protein

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MKNNTIYRLSNNLRIYDNGENEIRFRSGLWNYNEAVLDLSAETENFTKYFRKVIDNLKNNKGISVKDLDGYELNNEEKNN
LISIIDSLNEAGMLCSEDEKDNDFAMSKILLGDFSYNLNKKEENNQKLLFISDNDYAKQTAKNLSDGMNINLDLYSKENI
DNIISKDLTSNLDALEKKSNIDDIKNQLKNYSAILICMSHINMNLFRNINRVSIELKKPIIMSFIDGPFITTLSTLPPKT
GCLECFEQRILSRLEDHVLYHKFIESDFNPSDKSHKSIIPLLNIMTNMVISEGFLINNFNTCKIEGRVLSIFVPTLEIQS
QDLLRVPFCPACGNISKAKLKEINISTRNIVDGILEDINS

Sequences:

>Translated_360_residues
MKNNTIYRLSNNLRIYDNGENEIRFRSGLWNYNEAVLDLSAETENFTKYFRKVIDNLKNNKGISVKDLDGYELNNEEKNN
LISIIDSLNEAGMLCSEDEKDNDFAMSKILLGDFSYNLNKKEENNQKLLFISDNDYAKQTAKNLSDGMNINLDLYSKENI
DNIISKDLTSNLDALEKKSNIDDIKNQLKNYSAILICMSHINMNLFRNINRVSIELKKPIIMSFIDGPFITTLSTLPPKT
GCLECFEQRILSRLEDHVLYHKFIESDFNPSDKSHKSIIPLLNIMTNMVISEGFLINNFNTCKIEGRVLSIFVPTLEIQS
QDLLRVPFCPACGNISKAKLKEINISTRNIVDGILEDINS
>Mature_360_residues
MKNNTIYRLSNNLRIYDNGENEIRFRSGLWNYNEAVLDLSAETENFTKYFRKVIDNLKNNKGISVKDLDGYELNNEEKNN
LISIIDSLNEAGMLCSEDEKDNDFAMSKILLGDFSYNLNKKEENNQKLLFISDNDYAKQTAKNLSDGMNINLDLYSKENI
DNIISKDLTSNLDALEKKSNIDDIKNQLKNYSAILICMSHINMNLFRNINRVSIELKKPIIMSFIDGPFITTLSTLPPKT
GCLECFEQRILSRLEDHVLYHKFIESDFNPSDKSHKSIIPLLNIMTNMVISEGFLINNFNTCKIEGRVLSIFVPTLEIQS
QDLLRVPFCPACGNISKAKLKEINISTRNIVDGILEDINS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41211; Mature: 41211

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNNTIYRLSNNLRIYDNGENEIRFRSGLWNYNEAVLDLSAETENFTKYFRKVIDNLKNN
CCCCEEEEEECCEEEEECCCCCEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCC
KGISVKDLDGYELNNEEKNNLISIIDSLNEAGMLCSEDEKDNDFAMSKILLGDFSYNLNK
CCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
KEENNQKLLFISDNDYAKQTAKNLSDGMNINLDLYSKENIDNIISKDLTSNLDALEKKSN
CCCCCCEEEEEECCHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCHHHHHHHCC
IDDIKNQLKNYSAILICMSHINMNLFRNINRVSIELKKPIIMSFIDGPFITTLSTLPPKT
HHHHHHHHHCHHEEEEHHHHHCHHHHHCCCEEEEEECCCCEEHHCCCCHHHHHHCCCCCH
GCLECFEQRILSRLEDHVLYHKFIESDFNPSDKSHKSIIPLLNIMTNMVISEGFLINNFN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCC
TCKIEGRVLSIFVPTLEIQSQDLLRVPFCPACGNISKAKLKEINISTRNIVDGILEDINS
EEEECCEEEEEEEEEEEECCCCCEECCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MKNNTIYRLSNNLRIYDNGENEIRFRSGLWNYNEAVLDLSAETENFTKYFRKVIDNLKNN
CCCCEEEEEECCEEEEECCCCCEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCC
KGISVKDLDGYELNNEEKNNLISIIDSLNEAGMLCSEDEKDNDFAMSKILLGDFSYNLNK
CCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
KEENNQKLLFISDNDYAKQTAKNLSDGMNINLDLYSKENIDNIISKDLTSNLDALEKKSN
CCCCCCEEEEEECCHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCHHHHHHHCC
IDDIKNQLKNYSAILICMSHINMNLFRNINRVSIELKKPIIMSFIDGPFITTLSTLPPKT
HHHHHHHHHCHHEEEEHHHHHCHHHHHCCCEEEEEECCCCEEHHCCCCHHHHHHCCCCCH
GCLECFEQRILSRLEDHVLYHKFIESDFNPSDKSHKSIIPLLNIMTNMVISEGFLINNFN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCC
TCKIEGRVLSIFVPTLEIQSQDLLRVPFCPACGNISKAKLKEINISTRNIVDGILEDINS
EEEECCEEEEEEEEEEEECCCCCEECCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA