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The map label for this gene is gerAB [H]

Identifier: 170754373

GI number: 170754373

Start: 161158

End: 162255

Strand: Direct

Name: gerAB [H]

Synonym: CLD_0662

Alternate gene names: 170754373

Gene position: 161158-162255 (Clockwise)

Preceding gene: 170757021

Following gene: 170755389

Centisome position: 4.07

GC content: 25.87

Gene sequence:

>1098_bases
ATGGTGAGGGATGAGAACTTTGTAACATCTTATAGTTTGTTTGCTACTATTGTAACAAGTGTTATTGGAGTAAGTGTATT
TTCTTATGCTAGTGATCTTTGCGATATAGTTGGGAACGATGGGTGGATTGTAATAATAATAAGTGCTTTAATTAATTTTG
CTTTAATATATATCATGTACTTAATAATAAGGCTTAATAATTATGATGAATTTTATAAAATAGTAAATGACAATTTTGGA
AGGTATTTGGCAAAAATTATAGTTTTAAGTTTTGTTATATATAACATTGTGTATATATCTAATGGATTAAGAGTTTTTAC
AGAAGAGACAAAACTATATTTATTAGAAAAGACTCCTATGGAATTCTTGATTATTATTAGTATAATTGTGGCTAATTACC
TTATAAGGGGGGAGATGGATACTCTTGTTAAATTTAATGAAGTAGTCTTTTGGGTTAGTTTTATTCCGGTTATATTTGTA
TTGTTGTTTGCATTTTATCAAGGGGATTTTACTAATTTATTACCTGTATTGCAAAATAAGCCTAGTAATTATATAACAGC
TACATGGGTTACAATAAACAGATTCAAAGGGATAGAGATCATATTCTTAGTATTACCTTTTATGAAAAAAAAGAATAAAA
CATCAAAAATATTATTTAACAGCTTATTTTTTATCGGAATTTTTTATATTTTAGTAGTAATTTTATCTGTAGCTATGTTT
TCAACGGAACAGGTTAAATTAATGCTTTGGCCAGGAATAACCATGATAAAATCAATAAATATACCAGGTACATTTATTGA
AAGATGGGAAGGTATAATTATGGCTATATGGGTATTATTCTTTTTTACTACATTTACCAATTTGTATTATTTTTCAGCAG
ATATATTAAAGGATATGTTACATATAGAAGATATAAAAATATCATCGTTACTTATAATACCATTTGTATATATTATTGCA
CTATATCCTGAAAATGTGGCAGAGGTAATTGATGTAGGTAGGAATCTAATGCCTATATTATTCATTATAAATATGGTGGT
TATCCCTATAATTTTATTTTTAATAAGTAAGTTTAGATTAAGTAAGAGAAAGCAATAA

Upstream 100 bases:

>100_bases
ATGTATATAAGAGCGCCTATAAGATTTTTTAAGAAAAGACCAGATTACATGAAAACTAGAGATAAGATAAGACAAAGATA
AAATAGATTTGGAGGAATTA

Downstream 100 bases:

>100_bases
TATTAAAAGTAAGTATAAGCATAAATATATATTTGGGAGTTGTTATATTATGAAATCAAAAAAGTGCTTAGTTATAATGC
TTATATTATTAACCATATGT

Product: spore germination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MVRDENFVTSYSLFATIVTSVIGVSVFSYASDLCDIVGNDGWIVIIISALINFALIYIMYLIIRLNNYDEFYKIVNDNFG
RYLAKIIVLSFVIYNIVYISNGLRVFTEETKLYLLEKTPMEFLIIISIIVANYLIRGEMDTLVKFNEVVFWVSFIPVIFV
LLFAFYQGDFTNLLPVLQNKPSNYITATWVTINRFKGIEIIFLVLPFMKKKNKTSKILFNSLFFIGIFYILVVILSVAMF
STEQVKLMLWPGITMIKSINIPGTFIERWEGIIMAIWVLFFFTTFTNLYYFSADILKDMLHIEDIKISSLLIIPFVYIIA
LYPENVAEVIDVGRNLMPILFIINMVVIPIILFLISKFRLSKRKQ

Sequences:

>Translated_365_residues
MVRDENFVTSYSLFATIVTSVIGVSVFSYASDLCDIVGNDGWIVIIISALINFALIYIMYLIIRLNNYDEFYKIVNDNFG
RYLAKIIVLSFVIYNIVYISNGLRVFTEETKLYLLEKTPMEFLIIISIIVANYLIRGEMDTLVKFNEVVFWVSFIPVIFV
LLFAFYQGDFTNLLPVLQNKPSNYITATWVTINRFKGIEIIFLVLPFMKKKNKTSKILFNSLFFIGIFYILVVILSVAMF
STEQVKLMLWPGITMIKSINIPGTFIERWEGIIMAIWVLFFFTTFTNLYYFSADILKDMLHIEDIKISSLLIIPFVYIIA
LYPENVAEVIDVGRNLMPILFIINMVVIPIILFLISKFRLSKRKQ
>Mature_365_residues
MVRDENFVTSYSLFATIVTSVIGVSVFSYASDLCDIVGNDGWIVIIISALINFALIYIMYLIIRLNNYDEFYKIVNDNFG
RYLAKIIVLSFVIYNIVYISNGLRVFTEETKLYLLEKTPMEFLIIISIIVANYLIRGEMDTLVKFNEVVFWVSFIPVIFV
LLFAFYQGDFTNLLPVLQNKPSNYITATWVTINRFKGIEIIFLVLPFMKKKNKTSKILFNSLFFIGIFYILVVILSVAMF
STEQVKLMLWPGITMIKSINIPGTFIERWEGIIMAIWVLFFFTTFTNLYYFSADILKDMLHIEDIKISSLLIIPFVYIIA
LYPENVAEVIDVGRNLMPILFIINMVVIPIILFLISKFRLSKRKQ

Specific function: Involved in the germinative response to L-alanine. Could be an amino acid transporter. Forms a complex at the inner spore membrane which acts as a receptor for L-alanine, thus is involved in the stimulation of germination in response to alanine. Can stimu

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Spore germination protein (SGP) (TC 2.A.3.9) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004761 [H]

Pfam domain/function: PF03845 Spore_permease [H]

EC number: NA

Molecular weight: Translated: 42386; Mature: 42386

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRDENFVTSYSLFATIVTSVIGVSVFSYASDLCDIVGNDGWIVIIISALINFALIYIMY
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHH
LIIRLNNYDEFYKIVNDNFGRYLAKIIVLSFVIYNIVYISNGLRVFTEETKLYLLEKTPM
HHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEEEECCCH
EFLIIISIIVANYLIRGEMDTLVKFNEVVFWVSFIPVIFVLLFAFYQGDFTNLLPVLQNK
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC
PSNYITATWVTINRFKGIEIIFLVLPFMKKKNKTSKILFNSLFFIGIFYILVVILSVAMF
CCCEEEEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
STEQVKLMLWPGITMIKSINIPGTFIERWEGIIMAIWVLFFFTTFTNLYYFSADILKDML
CCCCEEEEEECCHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HIEDIKISSLLIIPFVYIIALYPENVAEVIDVGRNLMPILFIINMVVIPIILFLISKFRL
HHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SKRKQ
HCCCC
>Mature Secondary Structure
MVRDENFVTSYSLFATIVTSVIGVSVFSYASDLCDIVGNDGWIVIIISALINFALIYIMY
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHH
LIIRLNNYDEFYKIVNDNFGRYLAKIIVLSFVIYNIVYISNGLRVFTEETKLYLLEKTPM
HHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEEEECCCH
EFLIIISIIVANYLIRGEMDTLVKFNEVVFWVSFIPVIFVLLFAFYQGDFTNLLPVLQNK
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC
PSNYITATWVTINRFKGIEIIFLVLPFMKKKNKTSKILFNSLFFIGIFYILVVILSVAMF
CCCEEEEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
STEQVKLMLWPGITMIKSINIPGTFIERWEGIIMAIWVLFFFTTFTNLYYFSADILKDML
CCCCEEEEEECCHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HIEDIKISSLLIIPFVYIIALYPENVAEVIDVGRNLMPILFIINMVVIPIILFLISKFRL
HHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SKRKQ
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 3110007; 9639930; 9384377; 8382989 [H]