| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757006
Identifier: 170757006
GI number: 170757006
Start: 27974
End: 28807
Strand: Direct
Name: 170757006
Synonym: CLD_0797
Alternate gene names: NA
Gene position: 27974-28807 (Clockwise)
Preceding gene: 170756254
Following gene: 170756206
Centisome position: 0.71
GC content: 22.54
Gene sequence:
>834_bases ATGAATTATTTTTTTATAAAGCAATATTTTTCTCTTAGATGGAAAAGATGGTTAACAATTATTCCTATAATATTTTTTTC CGCTGTTTTATTAAAGTATCTAGCTCCTATTGACTTTTTACCAGCAAATAAAACTTTAATTCTTAAGGATTACATGTTTG AGTCACTTTCATATCCTTTTTATATATTGTTTGTAGCGCCTTTATTATATTGTTATCTTATATATGATATAGCTACTAAA GATTATGAAGGTGGTTATATAACTTTTATTATATCAAGGATTGAAAATAGAGTATCTTATTTTATATCAAAGATTCTTTT AATTATTATTACTGCAAATATATATTTTTTTATGAACTTATTTGTATTAATAATAGTTGGTTTAATATTTAGATTACCAT TACAGGGGGAATGTTATTCTCCAATATTAAAAACTTCATATAAACTTGGGTTAAATATTTATAGTATTTTTCTTATTCAA TATGGAATATATTTTATAGGCCTTATAGCTATAGGAATAAGTGTATTAGTTATTTCTTTATTATTTAATAATGGCATATA TTCAATGATATTTATAGTTATGTGTTTTATTCAAAGTCGAGAAGCTTTTTTTAATAACCATAAGAATTTAAAATGGTCTT TAATAGGACAGTTAGCATTATCTAAGCATTATCCTTTTTGTTTTTCTGATTCACAGGTTGATCCAAGCTATTTAAGTTAT ATGATTGGATATACCGCTTATTATTCTATTAAATTCTATATAGCAATATCATTAATAGCTTTTTTAGTAGGTATGTTATG TATTAATAAGATTAATTTTAACAAGAAAATGTGA
Upstream 100 bases:
>100_bases CATGTATTATATATAAAAATGATTGGAAAGATGTATCACAGGTACATGAAATTTTAAATAAAAATAAAATAAATACTATA AGTATAGAATAGGATAGCTT
Downstream 100 bases:
>100_bases GGATTAAGATAATGAAGAACTTAATATTAAATCAAATATATTCTACTAAGAAAAATGTTGTAACAAGCATACTGCTTATT TTATTTTTTAATATTTGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MNYFFIKQYFSLRWKRWLTIIPIIFFSAVLLKYLAPIDFLPANKTLILKDYMFESLSYPFYILFVAPLLYCYLIYDIATK DYEGGYITFIISRIENRVSYFISKILLIIITANIYFFMNLFVLIIVGLIFRLPLQGECYSPILKTSYKLGLNIYSIFLIQ YGIYFIGLIAIGISVLVISLLFNNGIYSMIFIVMCFIQSREAFFNNHKNLKWSLIGQLALSKHYPFCFSDSQVDPSYLSY MIGYTAYYSIKFYIAISLIAFLVGMLCINKINFNKKM
Sequences:
>Translated_277_residues MNYFFIKQYFSLRWKRWLTIIPIIFFSAVLLKYLAPIDFLPANKTLILKDYMFESLSYPFYILFVAPLLYCYLIYDIATK DYEGGYITFIISRIENRVSYFISKILLIIITANIYFFMNLFVLIIVGLIFRLPLQGECYSPILKTSYKLGLNIYSIFLIQ YGIYFIGLIAIGISVLVISLLFNNGIYSMIFIVMCFIQSREAFFNNHKNLKWSLIGQLALSKHYPFCFSDSQVDPSYLSY MIGYTAYYSIKFYIAISLIAFLVGMLCINKINFNKKM >Mature_277_residues MNYFFIKQYFSLRWKRWLTIIPIIFFSAVLLKYLAPIDFLPANKTLILKDYMFESLSYPFYILFVAPLLYCYLIYDIATK DYEGGYITFIISRIENRVSYFISKILLIIITANIYFFMNLFVLIIVGLIFRLPLQGECYSPILKTSYKLGLNIYSIFLIQ YGIYFIGLIAIGISVLVISLLFNNGIYSMIFIVMCFIQSREAFFNNHKNLKWSLIGQLALSKHYPFCFSDSQVDPSYLSY MIGYTAYYSIKFYIAISLIAFLVGMLCINKINFNKKM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32516; Mature: 32516
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYFFIKQYFSLRWKRWLTIIPIIFFSAVLLKYLAPIDFLPANKTLILKDYMFESLSYPF CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHCCCCH YILFVAPLLYCYLIYDIATKDYEGGYITFIISRIENRVSYFISKILLIIITANIYFFMNL HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVLIIVGLIFRLPLQGECYSPILKTSYKLGLNIYSIFLIQYGIYFIGLIAIGISVLVISL HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFNNGIYSMIFIVMCFIQSREAFFNNHKNLKWSLIGQLALSKHYPFCFSDSQVDPSYLSY HHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEECCCCCCCHHHHHH MIGYTAYYSIKFYIAISLIAFLVGMLCINKINFNKKM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNYFFIKQYFSLRWKRWLTIIPIIFFSAVLLKYLAPIDFLPANKTLILKDYMFESLSYPF CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHCCCCH YILFVAPLLYCYLIYDIATKDYEGGYITFIISRIENRVSYFISKILLIIITANIYFFMNL HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVLIIVGLIFRLPLQGECYSPILKTSYKLGLNIYSIFLIQYGIYFIGLIAIGISVLVISL HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFNNGIYSMIFIVMCFIQSREAFFNNHKNLKWSLIGQLALSKHYPFCFSDSQVDPSYLSY HHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEECCCCCCCHHHHHH MIGYTAYYSIKFYIAISLIAFLVGMLCINKINFNKKM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA