| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756951
Identifier: 170756951
GI number: 170756951
Start: 2480422
End: 2480724
Strand: Reverse
Name: 170756951
Synonym: CLD_2285
Alternate gene names: NA
Gene position: 2480724-2480422 (Counterclockwise)
Preceding gene: 170757506
Following gene: 170757056
Centisome position: 62.67
GC content: 25.08
Gene sequence:
>303_bases TTGATTAAACATATTGTGATGTGGAAACTAAAAGAATTTGCTGAAGGAAAATCTAAGTTAGAAAATGCTAACATAATAAA AATGAATTTAGAAGATTTAAAACATAGAATTGATGAAGTTAAATTAATTGAAGTTGGCGTGAACATTAACAATTCTCAAC AAGCATATGATGTTGTTTTATATTCAGAATTTGAGACCATAGAAGATTTAAATTTATATCAAAATCATCCTGATCATTTA AAGGTTGGAGAATTTATTAATGAGGTTAAAGAAGATAGAATAGTTACAGATTATGAAGTGTAA
Upstream 100 bases:
>100_bases TATTCTATATAATATAAAATATATAAGAAAGATATTTTTAAATTATATTTTAGAAGATATATAATAAAGTATAGCAAAAT TAAATGAAGAGGTGAACAGC
Downstream 100 bases:
>100_bases AATAATAATTTAAAAAGAGTAGAAAAAATTTATCTACTCTTTCTTTATCTTATCAGTAGATTTAATTTGAAATTGATTAG TTTTTCCCATCGTATAAGCT
Product: stress responsive alpha-beta barrel domain-containing protein
Products: NA
Alternate protein names: Stress Responsive A/B Barrel Domain Protein; Stress Responsive A/B Barrel Domain Family Protein
Number of amino acids: Translated: 100; Mature: 100
Protein sequence:
>100_residues MIKHIVMWKLKEFAEGKSKLENANIIKMNLEDLKHRIDEVKLIEVGVNINNSQQAYDVVLYSEFETIEDLNLYQNHPDHL KVGEFINEVKEDRIVTDYEV
Sequences:
>Translated_100_residues MIKHIVMWKLKEFAEGKSKLENANIIKMNLEDLKHRIDEVKLIEVGVNINNSQQAYDVVLYSEFETIEDLNLYQNHPDHL KVGEFINEVKEDRIVTDYEV >Mature_100_residues MIKHIVMWKLKEFAEGKSKLENANIIKMNLEDLKHRIDEVKLIEVGVNINNSQQAYDVVLYSEFETIEDLNLYQNHPDHL KVGEFINEVKEDRIVTDYEV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11817; Mature: 11817
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKHIVMWKLKEFAEGKSKLENANIIKMNLEDLKHRIDEVKLIEVGVNINNSQQAYDVVL CCCHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHEEEEEECCCCCCCCCCEEEEE YSEFETIEDLNLYQNHPDHLKVGEFINEVKEDRIVTDYEV ECCCCCHHHCHHHCCCCCCCHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MIKHIVMWKLKEFAEGKSKLENANIIKMNLEDLKHRIDEVKLIEVGVNINNSQQAYDVVL CCCHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHEEEEEECCCCCCCCCCEEEEE YSEFETIEDLNLYQNHPDHLKVGEFINEVKEDRIVTDYEV ECCCCCHHHCHHHCCCCCCCHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA