Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170756907

Identifier: 170756907

GI number: 170756907

Start: 3062826

End: 3063356

Strand: Reverse

Name: 170756907

Synonym: CLD_1712

Alternate gene names: NA

Gene position: 3063356-3062826 (Counterclockwise)

Preceding gene: 170755781

Following gene: 170756836

Centisome position: 77.39

GC content: 27.12

Gene sequence:

>531_bases
ATGTATATTATAAATTCAAATTTAAAATTTAGAGGATTATCTTATGGTAATAATCCTAAAATGATTATATTACATCATGC
AGAAGTTTCAGGCTGCAGCATACAAGATATTCATTCTTGGCATTTAAATAATGGTTGGAGTGGCTGTGGCTATAATTATT
TTATAAAGAAGGATGGATCTATTTATAAAGGTAGACCAGATAAGGCTATAGGTGCTCATTGTTTAAGTTATAATAGTGTA
TCTATTGGCATTTGTACAGAAGGTAGATTCAATATAGAAAGAATGGGAGAGGCTCAATATAATTCTTTAAAAGAGTTAAC
TCGCTACTTACAAAATAAATATAATATAAACAAAATATATGCACATAGAGAATTAAATGAAACAGATTGCCCAGGAAAAA
ACTTTCCACTAAGCAAAATAAAAAATGAATGTTTAGGTGGAACTTCAATTAGTAATAATAAAATAATCAAAAGCTATCCT
GGATATTTACTTAAGTATAATCCTAATAGATTTGATGGTAATACAAAATAA

Upstream 100 bases:

>100_bases
GAATTTTTAAGGTAAATTAAAGTTCAATTAGAATAATTATTTTTATTTATTGGTACAGTAATAAAAAGGTTTTATAAGTT
TAAATAAAAGGGGAATGGTT

Downstream 100 bases:

>100_bases
ATTGCAGAACATAGGCTATAGTGTAGGGAGGTATGGATATTTTGGAGATGAAAACGACGTAAATGTTATTTGAAAATTGA
ATAATACGGTATTTACAAAA

Product: prophage LambdaCh01, N-acetylmuramoyl-L-alanine amidase

Products: NA

Alternate protein names: Prophage; Negative Regulator Of Beta-Lactamase Expression; Phage Related N-Acetylmuramoyl-L-Alanine Amidase

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MYIINSNLKFRGLSYGNNPKMIILHHAEVSGCSIQDIHSWHLNNGWSGCGYNYFIKKDGSIYKGRPDKAIGAHCLSYNSV
SIGICTEGRFNIERMGEAQYNSLKELTRYLQNKYNINKIYAHRELNETDCPGKNFPLSKIKNECLGGTSISNNKIIKSYP
GYLLKYNPNRFDGNTK

Sequences:

>Translated_176_residues
MYIINSNLKFRGLSYGNNPKMIILHHAEVSGCSIQDIHSWHLNNGWSGCGYNYFIKKDGSIYKGRPDKAIGAHCLSYNSV
SIGICTEGRFNIERMGEAQYNSLKELTRYLQNKYNINKIYAHRELNETDCPGKNFPLSKIKNECLGGTSISNNKIIKSYP
GYLLKYNPNRFDGNTK
>Mature_176_residues
MYIINSNLKFRGLSYGNNPKMIILHHAEVSGCSIQDIHSWHLNNGWSGCGYNYFIKKDGSIYKGRPDKAIGAHCLSYNSV
SIGICTEGRFNIERMGEAQYNSLKELTRYLQNKYNINKIYAHRELNETDCPGKNFPLSKIKNECLGGTSISNNKIIKSYP
GYLLKYNPNRFDGNTK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Drosophila melanogaster, GI24651867, Length=134, Percent_Identity=32.8358208955224, Blast_Score=78, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24651865, Length=132, Percent_Identity=29.5454545454545, Blast_Score=69, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24586649, Length=132, Percent_Identity=29.5454545454545, Blast_Score=69, Evalue=1e-12,
Organism=Drosophila melanogaster, GI281365921, Length=127, Percent_Identity=30.7086614173228, Blast_Score=69, Evalue=1e-12,
Organism=Drosophila melanogaster, GI45551539, Length=127, Percent_Identity=30.7086614173228, Blast_Score=69, Evalue=1e-12,
Organism=Drosophila melanogaster, GI28574426, Length=129, Percent_Identity=35.6589147286822, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24645946, Length=124, Percent_Identity=32.258064516129, Blast_Score=67, Evalue=5e-12,
Organism=Drosophila melanogaster, GI21356551, Length=124, Percent_Identity=32.258064516129, Blast_Score=67, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24645949, Length=124, Percent_Identity=32.258064516129, Blast_Score=67, Evalue=6e-12,
Organism=Drosophila melanogaster, GI281365923, Length=129, Percent_Identity=30.2325581395349, Blast_Score=67, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20042; Mature: 20042

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIINSNLKFRGLSYGNNPKMIILHHAEVSGCSIQDIHSWHLNNGWSGCGYNYFIKKDGS
CEEECCCCEEEECCCCCCCCEEEEEECCCCCCEEEEEEEEECCCCCCCCCEEEEEECCCC
IYKGRPDKAIGAHCLSYNSVSIGICTEGRFNIERMGEAQYNSLKELTRYLQNKYNINKIY
EECCCCCCCHHHEEEECCCEEEEEECCCCCCHHHCCCHHHHHHHHHHHHHHCCCCCEEEE
AHRELNETDCPGKNFPLSKIKNECLGGTSISNNKIIKSYPGYLLKYNPNRFDGNTK
EECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEECCCCEEEEECCCCCCCCCC
>Mature Secondary Structure
MYIINSNLKFRGLSYGNNPKMIILHHAEVSGCSIQDIHSWHLNNGWSGCGYNYFIKKDGS
CEEECCCCEEEECCCCCCCCEEEEEECCCCCCEEEEEEEEECCCCCCCCCEEEEEECCCC
IYKGRPDKAIGAHCLSYNSVSIGICTEGRFNIERMGEAQYNSLKELTRYLQNKYNINKIY
EECCCCCCCHHHEEEECCCEEEEEECCCCCCHHHCCCHHHHHHHHHHHHHHCCCCCEEEE
AHRELNETDCPGKNFPLSKIKNECLGGTSISNNKIIKSYPGYLLKYNPNRFDGNTK
EECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEECCCCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA