| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755781
Identifier: 170755781
GI number: 170755781
Start: 3063495
End: 3063644
Strand: Reverse
Name: 170755781
Synonym: CLD_1711
Alternate gene names: NA
Gene position: 3063644-3063495 (Counterclockwise)
Preceding gene: 170754770
Following gene: 170756907
Centisome position: 77.4
GC content: 27.33
Gene sequence:
>150_bases ATGGCAGTAAGTAAAAATATTTTAGAAAAAAATCTAGCCCTAGAATATCAAGATGGCTTAGATAAGAAAGGGAAGGCTAT TATAAAAAAAGCTATCTATAAAAATGTAAAACTAACTGCAGAACCAGAAGAAATTAGAATAGAAGAATAA
Upstream 100 bases:
>100_bases TTTCCTAGCAGGAGCAACTTAAAAAAATCTGCATTTTTATATCCAAGTCATATATATAGGTGAAAACGAAATTAAACAAA AATTAAGGGGGTATAAAACT
Downstream 100 bases:
>100_bases CTTAAAGAGCTCTCATATTGTGAGGCCCTCTTATAAGTGAATTTTTAAGGTAAATTAAAGTTCAATTAGAATAATTATTT TTATTTATTGGTACAGTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 49; Mature: 48
Protein sequence:
>49_residues MAVSKNILEKNLALEYQDGLDKKGKAIIKKAIYKNVKLTAEPEEIRIEE
Sequences:
>Translated_49_residues MAVSKNILEKNLALEYQDGLDKKGKAIIKKAIYKNVKLTAEPEEIRIEE >Mature_48_residues AVSKNILEKNLALEYQDGLDKKGKAIIKKAIYKNVKLTAEPEEIRIEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5588; Mature: 5456
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVSKNILEKNLALEYQDGLDKKGKAIIKKAIYKNVKLTAEPEEIRIEE CCCCHHHHHHHCCEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEECC >Mature Secondary Structure AVSKNILEKNLALEYQDGLDKKGKAIIKKAIYKNVKLTAEPEEIRIEE CCCHHHHHHHCCEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA