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The map label for this gene is ydjZ [C]

Identifier: 170756825

GI number: 170756825

Start: 438227

End: 438901

Strand: Direct

Name: ydjZ [C]

Synonym: CLD_0395

Alternate gene names: 170756825

Gene position: 438227-438901 (Clockwise)

Preceding gene: 170757483

Following gene: 170755863

Centisome position: 11.07

GC content: 26.67

Gene sequence:

>675_bases
ATGAAAAATAAAAAAGACTTATTTAAAATAATTGGCTTAAGTTTAATCATTATTATTGTAGCTGTGTTTTTAGCAAGACA
TGGACATACAATTAGAAAAATGAATATAAAAAATACTGTAAGATATATTCAAAGTCGTGGAAAATTTTCATCTATATGTT
TCTTATTAGTATATGCCTTAAAACCACTAGTTATTATTATTCCAGCTTCCATGTTGTCCCTTGTAGGTGGAATTTTATTT
GGACCTGTAAAGGGATTTATATTAAATATGTTAGGTTTTTTCTTATCCGGAAGCTTAGCCTTTTGGTTAAGTAGGCTTTT
AGGCAAATCCTTTGTGGATAAGATTTTAAGGGGAAAGGCTGTAGAATTGGATAATAACATAGAAAAACAAGGATTTAAGA
TTATATTTCTTTTGAGGTTTCCACCAATATTTCCTTATGATCCTATAAGTTATGCTTCAGGACTTACAAAAATGAAATAT
AAACATTTTGTTTTAGGATCTTTGTTAGGAGTCATACCAGAAACTATGTGTTATTCTTATATGGGAAAAAATGTTATGAA
TCCTTTGACTTCAAAATTTATAGTCCCTGTAATTTTAGTTATACTAACTACAATTATAGGAATTTATGTTTATAAAAAAA
GTAAAATTAATGTTGTAAAAAATGAAAAACTATAG

Upstream 100 bases:

>100_bases
TATAATGTTATGAAAAATTCATTTATAAATCAAGTTAATAATCCACCGCTCTTAATTTGTATAGAAAAAAGGTAAAATGT
GTTGAGGAGAATGTTAACTT

Downstream 100 bases:

>100_bases
TTTGAAAGCAAAATAGCCTTAATTTTAAAACTGTAAATATAAATAATACATTTATAAAGCAATTCATTTTACTAAGTAGT
TCTAGATTTGACTCCATTAA

Product: DedA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MKNKKDLFKIIGLSLIIIIVAVFLARHGHTIRKMNIKNTVRYIQSRGKFSSICFLLVYALKPLVIIIPASMLSLVGGILF
GPVKGFILNMLGFFLSGSLAFWLSRLLGKSFVDKILRGKAVELDNNIEKQGFKIIFLLRFPPIFPYDPISYASGLTKMKY
KHFVLGSLLGVIPETMCYSYMGKNVMNPLTSKFIVPVILVILTTIIGIYVYKKSKINVVKNEKL

Sequences:

>Translated_224_residues
MKNKKDLFKIIGLSLIIIIVAVFLARHGHTIRKMNIKNTVRYIQSRGKFSSICFLLVYALKPLVIIIPASMLSLVGGILF
GPVKGFILNMLGFFLSGSLAFWLSRLLGKSFVDKILRGKAVELDNNIEKQGFKIIFLLRFPPIFPYDPISYASGLTKMKY
KHFVLGSLLGVIPETMCYSYMGKNVMNPLTSKFIVPVILVILTTIIGIYVYKKSKINVVKNEKL
>Mature_224_residues
MKNKKDLFKIIGLSLIIIIVAVFLARHGHTIRKMNIKNTVRYIQSRGKFSSICFLLVYALKPLVIIIPASMLSLVGGILF
GPVKGFILNMLGFFLSGSLAFWLSRLLGKSFVDKILRGKAVELDNNIEKQGFKIIFLLRFPPIFPYDPISYASGLTKMKY
KHFVLGSLLGVIPETMCYSYMGKNVMNPLTSKFIVPVILVILTTIIGIYVYKKSKINVVKNEKL

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TVP38/TMEM64 family [H]

Homologues:

Organism=Escherichia coli, GI1788049, Length=193, Percent_Identity=28.4974093264249, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI87081964, Length=214, Percent_Identity=27.1028037383178, Blast_Score=77, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 25239; Mature: 25239

Theoretical pI: Translated: 10.82; Mature: 10.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKKDLFKIIGLSLIIIIVAVFLARHGHTIRKMNIKNTVRYIQSRGKFSSICFLLVYAL
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
KPLVIIIPASMLSLVGGILFGPVKGFILNMLGFFLSGSLAFWLSRLLGKSFVDKILRGKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC
VELDNNIEKQGFKIIFLLRFPPIFPYDPISYASGLTKMKYKHFVLGSLLGVIPETMCYSY
CCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MGKNVMNPLTSKFIVPVILVILTTIIGIYVYKKSKINVVKNEKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MKNKKDLFKIIGLSLIIIIVAVFLARHGHTIRKMNIKNTVRYIQSRGKFSSICFLLVYAL
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
KPLVIIIPASMLSLVGGILFGPVKGFILNMLGFFLSGSLAFWLSRLLGKSFVDKILRGKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC
VELDNNIEKQGFKIIFLLRFPPIFPYDPISYASGLTKMKYKHFVLGSLLGVIPETMCYSY
CCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MGKNVMNPLTSKFIVPVILVILTTIIGIYVYKKSKINVVKNEKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]