| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756787
Identifier: 170756787
GI number: 170756787
Start: 833927
End: 834514
Strand: Direct
Name: 170756787
Synonym: CLD_0053
Alternate gene names: NA
Gene position: 833927-834514 (Clockwise)
Preceding gene: 170755943
Following gene: 170757571
Centisome position: 21.07
GC content: 40.82
Gene sequence:
>588_bases ATGAATATTATTGGAATTATTGCAAGTCAGCGAAAAGAAGGCAATACTGACTTTATTGTGAACAAACTACTAGAAGGTGC AAAGGAACAGGGGGCCGAAATCCAATCTTTCAGTTTCAGTGATCTTGACATAAAGCCGTGCAGGGGGTGTGAGGCCTGTC ACAAGGGTGCTCAGGGCTGTGTTATCAACGACGATATGCAGAAAATTTATGATGCAATGGAGTATGCAGATGCCATCGTT TTAGGTCTACCAATTTACATGGCGCAGATGAGTGCCCAAGGGAAAATATTCACCGACAGGTTGTTTGCGCGACATTCACC TCGATTCTCTCCATTTTTTAAAGAAAAAGCCTTAAAGCAAAAGTTAATTCTTTCATTTAATCAGGGTAATCCAAATGCGG ATCTATTCAAGTCGTATATTGATTATACGAAACACATGTTTGAAATTCTTGAATTTGATGTGAAAGAGGTACCTGTTGTT ACCGATTTGCGAAGTGGCCCGGCACAGGGAAGAGAAGATTTGTGCACGGACTTGAAGAAATTCGGTTCGGAGTTGGTTCT AGAAGAAACTCAGAAATCGTTAGGTTAA
Upstream 100 bases:
>100_bases TGTTGACAAGGACACAAAAATAAGATATGGTGATTATGGGTCTCAGGACACAATATGTTCGCCCATCGTAACAAGTCTAA AGTAATTAGGAGGAAAAAGA
Downstream 100 bases:
>100_bases TGCAATTATAGTAAAGTAGGGGTAAACATAGTTTAGTATCCCTGCTTTTATTAGGTCTTCATTATTGCTGCTACATAAAC AAAAATACCCATTCCTAGAG
Product: putative NADPH-dependent FMN reductase
Products: NA
Alternate protein names: Isf-2; MCJ-2; Mj2 [H]
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MNIIGIIASQRKEGNTDFIVNKLLEGAKEQGAEIQSFSFSDLDIKPCRGCEACHKGAQGCVINDDMQKIYDAMEYADAIV LGLPIYMAQMSAQGKIFTDRLFARHSPRFSPFFKEKALKQKLILSFNQGNPNADLFKSYIDYTKHMFEILEFDVKEVPVV TDLRSGPAQGREDLCTDLKKFGSELVLEETQKSLG
Sequences:
>Translated_195_residues MNIIGIIASQRKEGNTDFIVNKLLEGAKEQGAEIQSFSFSDLDIKPCRGCEACHKGAQGCVINDDMQKIYDAMEYADAIV LGLPIYMAQMSAQGKIFTDRLFARHSPRFSPFFKEKALKQKLILSFNQGNPNADLFKSYIDYTKHMFEILEFDVKEVPVV TDLRSGPAQGREDLCTDLKKFGSELVLEETQKSLG >Mature_195_residues MNIIGIIASQRKEGNTDFIVNKLLEGAKEQGAEIQSFSFSDLDIKPCRGCEACHKGAQGCVINDDMQKIYDAMEYADAIV LGLPIYMAQMSAQGKIFTDRLFARHSPRFSPFFKEKALKQKLILSFNQGNPNADLFKSYIDYTKHMFEILEFDVKEVPVV TDLRSGPAQGREDLCTDLKKFGSELVLEETQKSLG
Specific function: Redox-active protein probably involved in electron transport [H]
COG id: COG0655
COG function: function code R; Multimeric flavodoxin WrbA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ssuE family. Isf subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005025 [H]
Pfam domain/function: PF03358 FMN_red [H]
EC number: NA
Molecular weight: Translated: 21900; Mature: 21900
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIIGIIASQRKEGNTDFIVNKLLEGAKEQGAEIQSFSFSDLDIKPCRGCEACHKGAQGC CCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCC VINDDMQKIYDAMEYADAIVLGLPIYMAQMSAQGKIFTDRLFARHSPRFSPFFKEKALKQ EECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHH KLILSFNQGNPNADLFKSYIDYTKHMFEILEFDVKEVPVVTDLRSGPAQGREDLCTDLKK HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHH FGSELVLEETQKSLG HHHHHHHHHHHHHCC >Mature Secondary Structure MNIIGIIASQRKEGNTDFIVNKLLEGAKEQGAEIQSFSFSDLDIKPCRGCEACHKGAQGC CCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCC VINDDMQKIYDAMEYADAIVLGLPIYMAQMSAQGKIFTDRLFARHSPRFSPFFKEKALKQ EECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHH KLILSFNQGNPNADLFKSYIDYTKHMFEILEFDVKEVPVVTDLRSGPAQGREDLCTDLKK HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHH FGSELVLEETQKSLG HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]