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The map label for this gene is yhjH [H]

Identifier: 170755943

GI number: 170755943

Start: 833207

End: 833695

Strand: Direct

Name: yhjH [H]

Synonym: CLD_0054

Alternate gene names: 170755943

Gene position: 833207-833695 (Clockwise)

Preceding gene: 170754653

Following gene: 170756787

Centisome position: 21.05

GC content: 34.56

Gene sequence:

>489_bases
GTGAAAAAAGAAGAACAGGTTATGATGGAACTTTGGAACTTATTTAATAAGAGAATGTGGCTTGATGGCTTTAAACTGAA
AGCTAGACTTAAGGGTTACAATCCTTCTGAAGTACATTGTATTGAATACATTGGAGGAAACGAAGATTCCAATGTGACGT
TACTTGCTGAGTCGTTTTATATGACAAGGAGTGCTATCAGTAAACTAACGAAGAAGCTCATACAGAAAGGCCTTATTGAA
AGTTATCGGAAACCAGACAACAAGAAAGAAATTTATTTTAGACTTACGGAGCAAGGAAATGACATTTACAAGATCCATGG
GGAATTGCACAAAGAGTATCAAGAACGAGATAAAGCTTTATTTGACCAGATAACTGAGGAACAATATAACAGTATGCTTA
GTTTCACAGAAAAGTATAATAAACATTTGGATGCAGAAATAAAAAAACTTGGCGTAGATATTACGTCTGGATGGTGTGAT
AAGCTATAA

Upstream 100 bases:

>100_bases
TGAAAATAAGGAGATCTTAAGATTAAATATTTAATATTGTTGAATAGTACACAAAATCATATTATAATTATAGTCATGCA
AGCAAGCGGAGGGATAGATT

Downstream 100 bases:

>100_bases
TAGTGCCATGCGTTTATATCGCGTCATATAATGTCTAATCATTAGGCAAAAGTATTCCAAAAGAAAAACAACAGTATTAA
CAGGCAGCTCAATTCTATAT

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MKKEEQVMMELWNLFNKRMWLDGFKLKARLKGYNPSEVHCIEYIGGNEDSNVTLLAESFYMTRSAISKLTKKLIQKGLIE
SYRKPDNKKEIYFRLTEQGNDIYKIHGELHKEYQERDKALFDQITEEQYNSMLSFTEKYNKHLDAEIKKLGVDITSGWCD
KL

Sequences:

>Translated_162_residues
MKKEEQVMMELWNLFNKRMWLDGFKLKARLKGYNPSEVHCIEYIGGNEDSNVTLLAESFYMTRSAISKLTKKLIQKGLIE
SYRKPDNKKEIYFRLTEQGNDIYKIHGELHKEYQERDKALFDQITEEQYNSMLSFTEKYNKHLDAEIKKLGVDITSGWCD
KL
>Mature_162_residues
MKKEEQVMMELWNLFNKRMWLDGFKLKARLKGYNPSEVHCIEYIGGNEDSNVTLLAESFYMTRSAISKLTKKLIQKGLIE
SYRKPDNKKEIYFRLTEQGNDIYKIHGELHKEYQERDKALFDQITEEQYNSMLSFTEKYNKHLDAEIKKLGVDITSGWCD
KL

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 19245; Mature: 19245

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKEEQVMMELWNLFNKRMWLDGFKLKARLKGYNPSEVHCIEYIGGNEDSNVTLLAESFY
CCHHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCCCEEEEEEECCCCCCCEEEEHHHHH
MTRSAISKLTKKLIQKGLIESYRKPDNKKEIYFRLTEQGNDIYKIHGELHKEYQERDKAL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEHHHHHHHHHHHHHHHH
FDQITEEQYNSMLSFTEKYNKHLDAEIKKLGVDITSGWCDKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKKEEQVMMELWNLFNKRMWLDGFKLKARLKGYNPSEVHCIEYIGGNEDSNVTLLAESFY
CCHHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCCCEEEEEEECCCCCCCEEEEHHHHH
MTRSAISKLTKKLIQKGLIESYRKPDNKKEIYFRLTEQGNDIYKIHGELHKEYQERDKAL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEHHHHHHHHHHHHHHHH
FDQITEEQYNSMLSFTEKYNKHLDAEIKKLGVDITSGWCDKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9457850; 9384377 [H]