Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170756716

Identifier: 170756716

GI number: 170756716

Start: 2970892

End: 2971968

Strand: Reverse

Name: 170756716

Synonym: CLD_1785

Alternate gene names: NA

Gene position: 2971968-2970892 (Counterclockwise)

Preceding gene: 170755897

Following gene: 170756572

Centisome position: 75.08

GC content: 25.26

Gene sequence:

>1077_bases
ATGAAAAGCTTGTTTAAAGATCCTTTGTTTTATAAAGACTGGAAGAATAGTAAATGGATTTGTTTACTTATGACTTTAAT
TTTATTTTGGGATAAGCCTAGTAGAGCTTCAAGTGAGTTAAATATCCAAAAATATCAAATGGTTATGGATAAAAGTTTTG
TATTTGATAAAATGTGGTTTAATCAATTTTTATTAGGATGGAGTAGCGTTAAAACTACGCTTGTGCTAGGAGTAATAGTA
TTGCTTTGTATATTATTATTTAAAGGGGAAAAACAGGATTCTACCTGTGATTTGTTACATTCTATGCCTTTTACAAGAAA
GGATATTATGGTATCTAAAATTAAAGTAGGAATTTTAACTATAGTTATACCATTTTTAATTAATTTTATAATACTAACAT
TTTTTTATTTTAACAATAAATCCCATATAGGAAGTTCCTATGTAGATATACCTAAGTTTTATTTTATAAATTTATTATTT
TCTTTATTCCTTTTTATGTTTTTAGTTTTTATGCAAAGTATAGTGGGACAATATTTTGCAGCAGCTGTAATTGCACCAAT
AACTTTATTTGTACCAAATATGTTTGCATCTTATATAGTTGATTTAATAAGATTAAGTAAAGGGTTGAGGGATGATAGTG
CTAGATTAATGTCATTAGATCAATTTGTTAGAAATTCAAATATATATGATATAGTTAATACTCATGCAATAGATAGAATG
CAAAAAGGGCCAGATGGAGAACAAATGAGAAATATTGATAGATTTATATATGAAAATTTTGATATTAAAATAATGATACT
TATAATTTTAATAGTAGTGTTTGCTATTTTATCAGTAATTATATATAACAGGATTAAATTAGAGAGAATAAATAAATTAA
TAATATTTAAACCTGTTGAAACAGTATTTAAATTAGGTGTAGGTATATGTGTAGGAATGATTTTTTCACAAATGTTTGGA
TATCCAAAGGGACCGGAACCAGTTGCCAATATGCCACTAATATATATAACCTTATTAATAGGTACAGTTATAGGATATTT
TATAGCAAAACTAGTTGTGAAATTTTGTAGCAGATAA

Upstream 100 bases:

>100_bases
TTGCAAGAGAAATTGTTAGAGGCTGGGGCAGAGTTTGTAGAAGAAATAGATTTAAGTTTAGAAGATATGTTCATATACTC
CATGGAAGGAGGAAAAAAGA

Downstream 100 bases:

>100_bases
GATTTTATCCGATGACTATCCGCTCTAATACTCCCATCTTCTTCAAAGTGGGAGTAAAGAGCGGCTACATCTCTGGATAA
CGATTTCTAAGCTTTAGAGG

Product: ABC transporter, permease protein

Products: NA

Alternate protein names: Membrane Spanning Protein

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MKSLFKDPLFYKDWKNSKWICLLMTLILFWDKPSRASSELNIQKYQMVMDKSFVFDKMWFNQFLLGWSSVKTTLVLGVIV
LLCILLFKGEKQDSTCDLLHSMPFTRKDIMVSKIKVGILTIVIPFLINFIILTFFYFNNKSHIGSSYVDIPKFYFINLLF
SLFLFMFLVFMQSIVGQYFAAAVIAPITLFVPNMFASYIVDLIRLSKGLRDDSARLMSLDQFVRNSNIYDIVNTHAIDRM
QKGPDGEQMRNIDRFIYENFDIKIMILIILIVVFAILSVIIYNRIKLERINKLIIFKPVETVFKLGVGICVGMIFSQMFG
YPKGPEPVANMPLIYITLLIGTVIGYFIAKLVVKFCSR

Sequences:

>Translated_358_residues
MKSLFKDPLFYKDWKNSKWICLLMTLILFWDKPSRASSELNIQKYQMVMDKSFVFDKMWFNQFLLGWSSVKTTLVLGVIV
LLCILLFKGEKQDSTCDLLHSMPFTRKDIMVSKIKVGILTIVIPFLINFIILTFFYFNNKSHIGSSYVDIPKFYFINLLF
SLFLFMFLVFMQSIVGQYFAAAVIAPITLFVPNMFASYIVDLIRLSKGLRDDSARLMSLDQFVRNSNIYDIVNTHAIDRM
QKGPDGEQMRNIDRFIYENFDIKIMILIILIVVFAILSVIIYNRIKLERINKLIIFKPVETVFKLGVGICVGMIFSQMFG
YPKGPEPVANMPLIYITLLIGTVIGYFIAKLVVKFCSR
>Mature_358_residues
MKSLFKDPLFYKDWKNSKWICLLMTLILFWDKPSRASSELNIQKYQMVMDKSFVFDKMWFNQFLLGWSSVKTTLVLGVIV
LLCILLFKGEKQDSTCDLLHSMPFTRKDIMVSKIKVGILTIVIPFLINFIILTFFYFNNKSHIGSSYVDIPKFYFINLLF
SLFLFMFLVFMQSIVGQYFAAAVIAPITLFVPNMFASYIVDLIRLSKGLRDDSARLMSLDQFVRNSNIYDIVNTHAIDRM
QKGPDGEQMRNIDRFIYENFDIKIMILIILIVVFAILSVIIYNRIKLERINKLIIFKPVETVFKLGVGICVGMIFSQMFG
YPKGPEPVANMPLIYITLLIGTVIGYFIAKLVVKFCSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41531; Mature: 41531

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLFKDPLFYKDWKNSKWICLLMTLILFWDKPSRASSELNIQKYQMVMDKSFVFDKMWF
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
NQFLLGWSSVKTTLVLGVIVLLCILLFKGEKQDSTCDLLHSMPFTRKDIMVSKIKVGILT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHH
IVIPFLINFIILTFFYFNNKSHIGSSYVDIPKFYFINLLFSLFLFMFLVFMQSIVGQYFA
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAVIAPITLFVPNMFASYIVDLIRLSKGLRDDSARLMSLDQFVRNSNIYDIVNTHAIDRM
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
QKGPDGEQMRNIDRFIYENFDIKIMILIILIVVFAILSVIIYNRIKLERINKLIIFKPVE
HCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEECCHH
TVFKLGVGICVGMIFSQMFGYPKGPEPVANMPLIYITLLIGTVIGYFIAKLVVKFCSR
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKSLFKDPLFYKDWKNSKWICLLMTLILFWDKPSRASSELNIQKYQMVMDKSFVFDKMWF
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
NQFLLGWSSVKTTLVLGVIVLLCILLFKGEKQDSTCDLLHSMPFTRKDIMVSKIKVGILT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHH
IVIPFLINFIILTFFYFNNKSHIGSSYVDIPKFYFINLLFSLFLFMFLVFMQSIVGQYFA
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAVIAPITLFVPNMFASYIVDLIRLSKGLRDDSARLMSLDQFVRNSNIYDIVNTHAIDRM
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
QKGPDGEQMRNIDRFIYENFDIKIMILIILIVVFAILSVIIYNRIKLERINKLIIFKPVE
HCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEECCHH
TVFKLGVGICVGMIFSQMFGYPKGPEPVANMPLIYITLLIGTVIGYFIAKLVVKFCSR
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA