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The map label for this gene is yheN [H]

Identifier: 170756714

GI number: 170756714

Start: 433028

End: 433840

Strand: Direct

Name: yheN [H]

Synonym: CLD_0400

Alternate gene names: 170756714

Gene position: 433028-433840 (Clockwise)

Preceding gene: 170757505

Following gene: 170754525

Centisome position: 10.94

GC content: 27.92

Gene sequence:

>813_bases
ATGGAGAAAAAAAATAAGATTTTGTTGACAACAATATGTATTCTGCTTTTTGTAGTAGGTTTTTTTGTCACCAAAAACAT
AATAGATAAAAATAATGAAAAACAAGTTATGAAAAAAGAAATGATTAACGATAATAGCAAAATGGTAATTAGACAAATGG
ATGATAAGATAGTGTTTAGTGAATATATAAAGGATAAGTATGATGCTAAACAGGTATTTGAGAAGGACGGTAAGAAAATA
GCTTTTTTAACTTTTGATGATGGTCCAAGTCACCTAACTAATGATATATTAGATATATTAAAAGAATACCGCATAAAGGC
TACTTTTTTTGTAGTGGGAAACTTGGCAAAGGAGAATAAAAATATAATAGAGAGACAAATTAGAGAGGGACATTCAATAG
GTAATCATACCTATACTCATGACTATAAAAATATTTACTCTAGTGTAGATGTTTTTGTAAATGAAGTAGATAAAACTCAA
AATGTTATAAAATCTATAGTAGGATCTAACTATGATATAAAACTAGTAAGATTTCCAGGCGGATCCTTTGGGGATAGATT
AAATCCTTATAAAGAGGCTATAAAAAAGAAGGGTTATTATAATATGGATTGGAATGCTTTAAATGGGGATGCAGAAGGAA
ATAATATACCAAAAGAAAAATTAATACAAAATATAAAGAATACTATTGAAGGAAAAAATCACGTGGTTGTACTAATGCAT
GATTGTGCGGCTAAAAAAACTACTGTAGAAGCATTACCAGATATAATAGAGCATTTAATATCACAAGGATATGAATTCAA
AGCTCTAAAATAG

Upstream 100 bases:

>100_bases
TGAAATAGTTATTATTTATTAATATATTTTAATAAGTTTGTAACCCAAAATCCTATTTAAATTAGTATTATTATAATGAA
AGTTTTTGGAGGCTGTTAAT

Downstream 100 bases:

>100_bases
TATGTATTATATATCTTAAATTATAGTTAAAAGTTGTAAAAAGGGTGAGTTTTACAATATACTAAAGATATTAAAGTGGA
ATACTAAAACAAAATTGAGG

Product: polysaccharide deacetylase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MEKKNKILLTTICILLFVVGFFVTKNIIDKNNEKQVMKKEMINDNSKMVIRQMDDKIVFSEYIKDKYDAKQVFEKDGKKI
AFLTFDDGPSHLTNDILDILKEYRIKATFFVVGNLAKENKNIIERQIREGHSIGNHTYTHDYKNIYSSVDVFVNEVDKTQ
NVIKSIVGSNYDIKLVRFPGGSFGDRLNPYKEAIKKKGYYNMDWNALNGDAEGNNIPKEKLIQNIKNTIEGKNHVVVLMH
DCAAKKTTVEALPDIIEHLISQGYEFKALK

Sequences:

>Translated_270_residues
MEKKNKILLTTICILLFVVGFFVTKNIIDKNNEKQVMKKEMINDNSKMVIRQMDDKIVFSEYIKDKYDAKQVFEKDGKKI
AFLTFDDGPSHLTNDILDILKEYRIKATFFVVGNLAKENKNIIERQIREGHSIGNHTYTHDYKNIYSSVDVFVNEVDKTQ
NVIKSIVGSNYDIKLVRFPGGSFGDRLNPYKEAIKKKGYYNMDWNALNGDAEGNNIPKEKLIQNIKNTIEGKNHVVVLMH
DCAAKKTTVEALPDIIEHLISQGYEFKALK
>Mature_270_residues
MEKKNKILLTTICILLFVVGFFVTKNIIDKNNEKQVMKKEMINDNSKMVIRQMDDKIVFSEYIKDKYDAKQVFEKDGKKI
AFLTFDDGPSHLTNDILDILKEYRIKATFFVVGNLAKENKNIIERQIREGHSIGNHTYTHDYKNIYSSVDVFVNEVDKTQ
NVIKSIVGSNYDIKLVRFPGGSFGDRLNPYKEAIKKKGYYNMDWNALNGDAEGNNIPKEKLIQNIKNTIEGKNHVVVLMH
DCAAKKTTVEALPDIIEHLISQGYEFKALK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 31076; Mature: 31076

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKKNKILLTTICILLFVVGFFVTKNIIDKNNEKQVMKKEMINDNSKMVIRQMDDKIVFS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEHHHHCCHHHHH
EYIKDKYDAKQVFEKDGKKIAFLTFDDGPSHLTNDILDILKEYRIKATFFVVGNLAKENK
HHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHH
NIIERQIREGHSIGNHTYTHDYKNIYSSVDVFVNEVDKTQNVIKSIVGSNYDIKLVRFPG
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC
GSFGDRLNPYKEAIKKKGYYNMDWNALNGDAEGNNIPKEKLIQNIKNTIEGKNHVVVLMH
CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEE
DCAAKKTTVEALPDIIEHLISQGYEFKALK
CCCCCHHHHHHHHHHHHHHHHCCCCEECCC
>Mature Secondary Structure
MEKKNKILLTTICILLFVVGFFVTKNIIDKNNEKQVMKKEMINDNSKMVIRQMDDKIVFS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEHHHHCCHHHHH
EYIKDKYDAKQVFEKDGKKIAFLTFDDGPSHLTNDILDILKEYRIKATFFVVGNLAKENK
HHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHH
NIIERQIREGHSIGNHTYTHDYKNIYSSVDVFVNEVDKTQNVIKSIVGSNYDIKLVRFPG
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC
GSFGDRLNPYKEAIKKKGYYNMDWNALNGDAEGNNIPKEKLIQNIKNTIEGKNHVVVLMH
CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEE
DCAAKKTTVEALPDIIEHLISQGYEFKALK
CCCCCHHHHHHHHHHHHHHHHCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]