| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756705
Identifier: 170756705
GI number: 170756705
Start: 1961131
End: 1961547
Strand: Reverse
Name: 170756705
Synonym: CLD_2801
Alternate gene names: NA
Gene position: 1961547-1961131 (Counterclockwise)
Preceding gene: 170757099
Following gene: 170757759
Centisome position: 49.56
GC content: 24.22
Gene sequence:
>417_bases ATGGGTGATGATGGTATAGCCATAAAAATAGCTAAAAATATTGAGGGATTTTTAAAAGAAAATTATATAGATCTTATAAT AGGAGAAACTGATTTTGAATATTGCCTTTCAAGAATAAAAAAGGAGGATTTCTTATTTATATTAGATGCGGGATACTATG GTAAAAAAATAGGAGATATAACAATATTACCTCTAGATACTTATACATCACATAAAAATGGATATACCCAACATAGCTAT AGTTTTATAGACTTAGTTAAACTTTATTATAATGAAATAAAGGGATACATTCTAGCTATTGAAGTTTCTAATATAGATTA CACTTTGGAAATCAGTAAAGAGCTTAAAGTTAATATGAATAAAATTTCTGATGAACTAATATCTATAATTAGAAAGAAAG GAAAATATTTTAAATAA
Upstream 100 bases:
>100_bases GCATTTCCTGTGCCACCCATTTAATAAGTAATAATAATGAACCAGTTAAAGTTGAAGTATTAGTATAGCTATTAAAGTTA TTGCTATAGGAAATATTTTA
Downstream 100 bases:
>100_bases TCAAGTGATTTTTACAAGTTTTCTAAAAAATTAAACTTTATTTATGTATCTCTTGTAAACAAGATCTCTAAGATATTTTA TTCTTATTATGTTAGTAATA
Product: hydrogenase maturation protease
Products: NA
Alternate protein names: Hydrogenase Maturation Protease Delta Subunit HyaD-Like; Ni Fe-Hydrogenase Maturation Factor
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MGDDGIAIKIAKNIEGFLKENYIDLIIGETDFEYCLSRIKKEDFLFILDAGYYGKKIGDITILPLDTYTSHKNGYTQHSY SFIDLVKLYYNEIKGYILAIEVSNIDYTLEISKELKVNMNKISDELISIIRKKGKYFK
Sequences:
>Translated_138_residues MGDDGIAIKIAKNIEGFLKENYIDLIIGETDFEYCLSRIKKEDFLFILDAGYYGKKIGDITILPLDTYTSHKNGYTQHSY SFIDLVKLYYNEIKGYILAIEVSNIDYTLEISKELKVNMNKISDELISIIRKKGKYFK >Mature_137_residues GDDGIAIKIAKNIEGFLKENYIDLIIGETDFEYCLSRIKKEDFLFILDAGYYGKKIGDITILPLDTYTSHKNGYTQHSYS FIDLVKLYYNEIKGYILAIEVSNIDYTLEISKELKVNMNKISDELISIIRKKGKYFK
Specific function: Unknown
COG id: COG0680
COG function: function code C; Ni,Fe-hydrogenase maturation factor
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15988; Mature: 15856
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDDGIAIKIAKNIEGFLKENYIDLIIGETDFEYCLSRIKKEDFLFILDAGYYGKKIGDI CCCCCEEEEEECCHHHHHHCCEEEEEECCCCHHHHHHHCCCCCEEEEEECCCCCCEECCE TILPLDTYTSHKNGYTQHSYSFIDLVKLYYNEIKGYILAIEVSNIDYTLEISKELKVNMN EEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEECCCEEEEHH KISDELISIIRKKGKYFK HHHHHHHHHHHHCCCCCC >Mature Secondary Structure GDDGIAIKIAKNIEGFLKENYIDLIIGETDFEYCLSRIKKEDFLFILDAGYYGKKIGDI CCCCEEEEEECCHHHHHHCCEEEEEECCCCHHHHHHHCCCCCEEEEEECCCCCCEECCE TILPLDTYTSHKNGYTQHSYSFIDLVKLYYNEIKGYILAIEVSNIDYTLEISKELKVNMN EEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEECCCEEEEHH KISDELISIIRKKGKYFK HHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA