Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170756705

Identifier: 170756705

GI number: 170756705

Start: 1961131

End: 1961547

Strand: Reverse

Name: 170756705

Synonym: CLD_2801

Alternate gene names: NA

Gene position: 1961547-1961131 (Counterclockwise)

Preceding gene: 170757099

Following gene: 170757759

Centisome position: 49.56

GC content: 24.22

Gene sequence:

>417_bases
ATGGGTGATGATGGTATAGCCATAAAAATAGCTAAAAATATTGAGGGATTTTTAAAAGAAAATTATATAGATCTTATAAT
AGGAGAAACTGATTTTGAATATTGCCTTTCAAGAATAAAAAAGGAGGATTTCTTATTTATATTAGATGCGGGATACTATG
GTAAAAAAATAGGAGATATAACAATATTACCTCTAGATACTTATACATCACATAAAAATGGATATACCCAACATAGCTAT
AGTTTTATAGACTTAGTTAAACTTTATTATAATGAAATAAAGGGATACATTCTAGCTATTGAAGTTTCTAATATAGATTA
CACTTTGGAAATCAGTAAAGAGCTTAAAGTTAATATGAATAAAATTTCTGATGAACTAATATCTATAATTAGAAAGAAAG
GAAAATATTTTAAATAA

Upstream 100 bases:

>100_bases
GCATTTCCTGTGCCACCCATTTAATAAGTAATAATAATGAACCAGTTAAAGTTGAAGTATTAGTATAGCTATTAAAGTTA
TTGCTATAGGAAATATTTTA

Downstream 100 bases:

>100_bases
TCAAGTGATTTTTACAAGTTTTCTAAAAAATTAAACTTTATTTATGTATCTCTTGTAAACAAGATCTCTAAGATATTTTA
TTCTTATTATGTTAGTAATA

Product: hydrogenase maturation protease

Products: NA

Alternate protein names: Hydrogenase Maturation Protease Delta Subunit HyaD-Like; Ni Fe-Hydrogenase Maturation Factor

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MGDDGIAIKIAKNIEGFLKENYIDLIIGETDFEYCLSRIKKEDFLFILDAGYYGKKIGDITILPLDTYTSHKNGYTQHSY
SFIDLVKLYYNEIKGYILAIEVSNIDYTLEISKELKVNMNKISDELISIIRKKGKYFK

Sequences:

>Translated_138_residues
MGDDGIAIKIAKNIEGFLKENYIDLIIGETDFEYCLSRIKKEDFLFILDAGYYGKKIGDITILPLDTYTSHKNGYTQHSY
SFIDLVKLYYNEIKGYILAIEVSNIDYTLEISKELKVNMNKISDELISIIRKKGKYFK
>Mature_137_residues
GDDGIAIKIAKNIEGFLKENYIDLIIGETDFEYCLSRIKKEDFLFILDAGYYGKKIGDITILPLDTYTSHKNGYTQHSYS
FIDLVKLYYNEIKGYILAIEVSNIDYTLEISKELKVNMNKISDELISIIRKKGKYFK

Specific function: Unknown

COG id: COG0680

COG function: function code C; Ni,Fe-hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15988; Mature: 15856

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDDGIAIKIAKNIEGFLKENYIDLIIGETDFEYCLSRIKKEDFLFILDAGYYGKKIGDI
CCCCCEEEEEECCHHHHHHCCEEEEEECCCCHHHHHHHCCCCCEEEEEECCCCCCEECCE
TILPLDTYTSHKNGYTQHSYSFIDLVKLYYNEIKGYILAIEVSNIDYTLEISKELKVNMN
EEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEECCCEEEEHH
KISDELISIIRKKGKYFK
HHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
GDDGIAIKIAKNIEGFLKENYIDLIIGETDFEYCLSRIKKEDFLFILDAGYYGKKIGDI
CCCCEEEEEECCHHHHHHCCEEEEEECCCCHHHHHHHCCCCCEEEEEECCCCCCEECCE
TILPLDTYTSHKNGYTQHSYSFIDLVKLYYNEIKGYILAIEVSNIDYTLEISKELKVNMN
EEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEECCCEEEEHH
KISDELISIIRKKGKYFK
HHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA