| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756683
Identifier: 170756683
GI number: 170756683
Start: 2886918
End: 2887970
Strand: Reverse
Name: 170756683
Synonym: CLD_1855
Alternate gene names: NA
Gene position: 2887970-2886918 (Counterclockwise)
Preceding gene: 170757489
Following gene: 170755835
Centisome position: 72.96
GC content: 31.62
Gene sequence:
>1053_bases ATGAAACCCATAGGTGGAGAACTTTGGTTTGACGAAATCATATTTAATGATGCTGAAAACAATTTTCAACATTTGAATGC AGTATTTTTAAATGGCGGGCAAAGTGCCATTCAATTTATTATTGAAGACATTGATTTCAAGGAGGATGAGCATGTGCTTA TGCCTTCATATTTATGTCCTACGATTTTATATAATTTTCAAAGAAGCAATATAAAGTTCATTTTTTATGAAGTTAACGAA GACTTGTCAATTGATTTGAAAGACATGGAAAATAAAATCAATCAATATAAAGTTAGAACTGTTTATTTCATAGATTATTT TGGATTTTACCACAACGACAATGTGATTGACTATCTAAGAAAAATCCAGAAAACAGGTGTGATATTGGTTGAAGATGCAG TGCAAATGCTGTGGTTTTCTAAACAAGAAAAGTTCATAGGAGATTATGTATTTAATAGTTACAGGAAATTTTTACCGATT GACGGCAGTGTGGTTTTATGCAACAAGTCCATGGAACTTGGTGAGACGAAAGACAGGTATTATGAACTAATCCATGAAGC TAGAACAAAGAAGACTGCATATGTGAAATCAAACATTGGAAGTGAGGAGGAGTTCTTAAAACTGTTTGCTGAAGCTGATG AAGCCTATTACCAAAGAAGAAATGCAAGTGGAATGGATAGTAAATCAAAAAAATTATTGAACAAGGTAAAGCATCAGCAA ATAAAACAGCTTAGAATTGACAATTATAATTATTTGCATGAGAAATTGACTGACTTAAATGACGTGAAGGTCATGTTCAA CAAGGAATTAATAACTGATAATGTTCCATTGACACTTCCCATAATGATAAAAAACAGGAACTTTGTCAGAAAAGAGCTAA GAAAGCATTCAATTTACTGTCCAGTACATTGGAATATTGAAAATGAAAAGTGGGCAAGTGTTTTAGATAAAAGTCGGAAA GTTTCAAGCTCAATACTTTCAATACCCATTGACTGGAGATATGATAAAAAAGATATGCACTATATTTTAGAGCAATTAAT CAGTATTATCTAA
Upstream 100 bases:
>100_bases GACCTGGTACTGGAATAAAGCCAGAATTGGCCCATGTTCTAGTTGGCAGAGAACTAAAGAGAGATTTGAAAAAGGGTGAG GTCATACAATGGAAGGACAT
Downstream 100 bases:
>100_bases TTTTAGGAGTAGAATTTATGAAGAAATTAATGATTATAGGCTCAGGAGAGCTGCAGGTTCCATTAATCAAGATTTGCAAG AAAAATGGATATGAAGTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MKPIGGELWFDEIIFNDAENNFQHLNAVFLNGGQSAIQFIIEDIDFKEDEHVLMPSYLCPTILYNFQRSNIKFIFYEVNE DLSIDLKDMENKINQYKVRTVYFIDYFGFYHNDNVIDYLRKIQKTGVILVEDAVQMLWFSKQEKFIGDYVFNSYRKFLPI DGSVVLCNKSMELGETKDRYYELIHEARTKKTAYVKSNIGSEEEFLKLFAEADEAYYQRRNASGMDSKSKKLLNKVKHQQ IKQLRIDNYNYLHEKLTDLNDVKVMFNKELITDNVPLTLPIMIKNRNFVRKELRKHSIYCPVHWNIENEKWASVLDKSRK VSSSILSIPIDWRYDKKDMHYILEQLISII
Sequences:
>Translated_350_residues MKPIGGELWFDEIIFNDAENNFQHLNAVFLNGGQSAIQFIIEDIDFKEDEHVLMPSYLCPTILYNFQRSNIKFIFYEVNE DLSIDLKDMENKINQYKVRTVYFIDYFGFYHNDNVIDYLRKIQKTGVILVEDAVQMLWFSKQEKFIGDYVFNSYRKFLPI DGSVVLCNKSMELGETKDRYYELIHEARTKKTAYVKSNIGSEEEFLKLFAEADEAYYQRRNASGMDSKSKKLLNKVKHQQ IKQLRIDNYNYLHEKLTDLNDVKVMFNKELITDNVPLTLPIMIKNRNFVRKELRKHSIYCPVHWNIENEKWASVLDKSRK VSSSILSIPIDWRYDKKDMHYILEQLISII >Mature_350_residues MKPIGGELWFDEIIFNDAENNFQHLNAVFLNGGQSAIQFIIEDIDFKEDEHVLMPSYLCPTILYNFQRSNIKFIFYEVNE DLSIDLKDMENKINQYKVRTVYFIDYFGFYHNDNVIDYLRKIQKTGVILVEDAVQMLWFSKQEKFIGDYVFNSYRKFLPI DGSVVLCNKSMELGETKDRYYELIHEARTKKTAYVKSNIGSEEEFLKLFAEADEAYYQRRNASGMDSKSKKLLNKVKHQQ IKQLRIDNYNYLHEKLTDLNDVKVMFNKELITDNVPLTLPIMIKNRNFVRKELRKHSIYCPVHWNIENEKWASVLDKSRK VSSSILSIPIDWRYDKKDMHYILEQLISII
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41654; Mature: 41654
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPIGGELWFDEIIFNDAENNFQHLNAVFLNGGQSAIQFIIEDIDFKEDEHVLMPSYLCP CCCCCCCHHHHHHHHCCCCCCHHHEEEEEECCCHHHHHHHHHHCCCCCCCCEECCHHHHH TILYNFQRSNIKFIFYEVNEDLSIDLKDMENKINQYKVRTVYFIDYFGFYHNDNVIDYLR HHHHHHCCCCEEEEEEEECCCCEEEHHHHHHHHHHEEEEEEEEEEEECEECCCCHHHHHH KIQKTGVILVEDAVQMLWFSKQEKFIGDYVFNSYRKFLPIDGSVVLCNKSMELGETKDRY HHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHH YELIHEARTKKTAYVKSNIGSEEEFLKLFAEADEAYYQRRNASGMDSKSKKLLNKVKHQQ HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH IKQLRIDNYNYLHEKLTDLNDVKVMFNKELITDNVPLTLPIMIKNRNFVRKELRKHSIYC HHHHHCCCCHHHHHHHCCCCCEEEEEEHHHCCCCCCEEEEEEECCCHHHHHHHHHCCEEE PVHWNIENEKWASVLDKSRKVSSSILSIPIDWRYDKKDMHYILEQLISII EEEECCCCHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHC >Mature Secondary Structure MKPIGGELWFDEIIFNDAENNFQHLNAVFLNGGQSAIQFIIEDIDFKEDEHVLMPSYLCP CCCCCCCHHHHHHHHCCCCCCHHHEEEEEECCCHHHHHHHHHHCCCCCCCCEECCHHHHH TILYNFQRSNIKFIFYEVNEDLSIDLKDMENKINQYKVRTVYFIDYFGFYHNDNVIDYLR HHHHHHCCCCEEEEEEEECCCCEEEHHHHHHHHHHEEEEEEEEEEEECEECCCCHHHHHH KIQKTGVILVEDAVQMLWFSKQEKFIGDYVFNSYRKFLPIDGSVVLCNKSMELGETKDRY HHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHH YELIHEARTKKTAYVKSNIGSEEEFLKLFAEADEAYYQRRNASGMDSKSKKLLNKVKHQQ HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH IKQLRIDNYNYLHEKLTDLNDVKVMFNKELITDNVPLTLPIMIKNRNFVRKELRKHSIYC HHHHHCCCCHHHHHHHCCCCCEEEEEEHHHCCCCCCEEEEEEECCCHHHHHHHHHCCEEE PVHWNIENEKWASVLDKSRKVSSSILSIPIDWRYDKKDMHYILEQLISII EEEECCCCHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA