Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170756683

Identifier: 170756683

GI number: 170756683

Start: 2886918

End: 2887970

Strand: Reverse

Name: 170756683

Synonym: CLD_1855

Alternate gene names: NA

Gene position: 2887970-2886918 (Counterclockwise)

Preceding gene: 170757489

Following gene: 170755835

Centisome position: 72.96

GC content: 31.62

Gene sequence:

>1053_bases
ATGAAACCCATAGGTGGAGAACTTTGGTTTGACGAAATCATATTTAATGATGCTGAAAACAATTTTCAACATTTGAATGC
AGTATTTTTAAATGGCGGGCAAAGTGCCATTCAATTTATTATTGAAGACATTGATTTCAAGGAGGATGAGCATGTGCTTA
TGCCTTCATATTTATGTCCTACGATTTTATATAATTTTCAAAGAAGCAATATAAAGTTCATTTTTTATGAAGTTAACGAA
GACTTGTCAATTGATTTGAAAGACATGGAAAATAAAATCAATCAATATAAAGTTAGAACTGTTTATTTCATAGATTATTT
TGGATTTTACCACAACGACAATGTGATTGACTATCTAAGAAAAATCCAGAAAACAGGTGTGATATTGGTTGAAGATGCAG
TGCAAATGCTGTGGTTTTCTAAACAAGAAAAGTTCATAGGAGATTATGTATTTAATAGTTACAGGAAATTTTTACCGATT
GACGGCAGTGTGGTTTTATGCAACAAGTCCATGGAACTTGGTGAGACGAAAGACAGGTATTATGAACTAATCCATGAAGC
TAGAACAAAGAAGACTGCATATGTGAAATCAAACATTGGAAGTGAGGAGGAGTTCTTAAAACTGTTTGCTGAAGCTGATG
AAGCCTATTACCAAAGAAGAAATGCAAGTGGAATGGATAGTAAATCAAAAAAATTATTGAACAAGGTAAAGCATCAGCAA
ATAAAACAGCTTAGAATTGACAATTATAATTATTTGCATGAGAAATTGACTGACTTAAATGACGTGAAGGTCATGTTCAA
CAAGGAATTAATAACTGATAATGTTCCATTGACACTTCCCATAATGATAAAAAACAGGAACTTTGTCAGAAAAGAGCTAA
GAAAGCATTCAATTTACTGTCCAGTACATTGGAATATTGAAAATGAAAAGTGGGCAAGTGTTTTAGATAAAAGTCGGAAA
GTTTCAAGCTCAATACTTTCAATACCCATTGACTGGAGATATGATAAAAAAGATATGCACTATATTTTAGAGCAATTAAT
CAGTATTATCTAA

Upstream 100 bases:

>100_bases
GACCTGGTACTGGAATAAAGCCAGAATTGGCCCATGTTCTAGTTGGCAGAGAACTAAAGAGAGATTTGAAAAAGGGTGAG
GTCATACAATGGAAGGACAT

Downstream 100 bases:

>100_bases
TTTTAGGAGTAGAATTTATGAAGAAATTAATGATTATAGGCTCAGGAGAGCTGCAGGTTCCATTAATCAAGATTTGCAAG
AAAAATGGATATGAAGTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MKPIGGELWFDEIIFNDAENNFQHLNAVFLNGGQSAIQFIIEDIDFKEDEHVLMPSYLCPTILYNFQRSNIKFIFYEVNE
DLSIDLKDMENKINQYKVRTVYFIDYFGFYHNDNVIDYLRKIQKTGVILVEDAVQMLWFSKQEKFIGDYVFNSYRKFLPI
DGSVVLCNKSMELGETKDRYYELIHEARTKKTAYVKSNIGSEEEFLKLFAEADEAYYQRRNASGMDSKSKKLLNKVKHQQ
IKQLRIDNYNYLHEKLTDLNDVKVMFNKELITDNVPLTLPIMIKNRNFVRKELRKHSIYCPVHWNIENEKWASVLDKSRK
VSSSILSIPIDWRYDKKDMHYILEQLISII

Sequences:

>Translated_350_residues
MKPIGGELWFDEIIFNDAENNFQHLNAVFLNGGQSAIQFIIEDIDFKEDEHVLMPSYLCPTILYNFQRSNIKFIFYEVNE
DLSIDLKDMENKINQYKVRTVYFIDYFGFYHNDNVIDYLRKIQKTGVILVEDAVQMLWFSKQEKFIGDYVFNSYRKFLPI
DGSVVLCNKSMELGETKDRYYELIHEARTKKTAYVKSNIGSEEEFLKLFAEADEAYYQRRNASGMDSKSKKLLNKVKHQQ
IKQLRIDNYNYLHEKLTDLNDVKVMFNKELITDNVPLTLPIMIKNRNFVRKELRKHSIYCPVHWNIENEKWASVLDKSRK
VSSSILSIPIDWRYDKKDMHYILEQLISII
>Mature_350_residues
MKPIGGELWFDEIIFNDAENNFQHLNAVFLNGGQSAIQFIIEDIDFKEDEHVLMPSYLCPTILYNFQRSNIKFIFYEVNE
DLSIDLKDMENKINQYKVRTVYFIDYFGFYHNDNVIDYLRKIQKTGVILVEDAVQMLWFSKQEKFIGDYVFNSYRKFLPI
DGSVVLCNKSMELGETKDRYYELIHEARTKKTAYVKSNIGSEEEFLKLFAEADEAYYQRRNASGMDSKSKKLLNKVKHQQ
IKQLRIDNYNYLHEKLTDLNDVKVMFNKELITDNVPLTLPIMIKNRNFVRKELRKHSIYCPVHWNIENEKWASVLDKSRK
VSSSILSIPIDWRYDKKDMHYILEQLISII

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41654; Mature: 41654

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPIGGELWFDEIIFNDAENNFQHLNAVFLNGGQSAIQFIIEDIDFKEDEHVLMPSYLCP
CCCCCCCHHHHHHHHCCCCCCHHHEEEEEECCCHHHHHHHHHHCCCCCCCCEECCHHHHH
TILYNFQRSNIKFIFYEVNEDLSIDLKDMENKINQYKVRTVYFIDYFGFYHNDNVIDYLR
HHHHHHCCCCEEEEEEEECCCCEEEHHHHHHHHHHEEEEEEEEEEEECEECCCCHHHHHH
KIQKTGVILVEDAVQMLWFSKQEKFIGDYVFNSYRKFLPIDGSVVLCNKSMELGETKDRY
HHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHH
YELIHEARTKKTAYVKSNIGSEEEFLKLFAEADEAYYQRRNASGMDSKSKKLLNKVKHQQ
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
IKQLRIDNYNYLHEKLTDLNDVKVMFNKELITDNVPLTLPIMIKNRNFVRKELRKHSIYC
HHHHHCCCCHHHHHHHCCCCCEEEEEEHHHCCCCCCEEEEEEECCCHHHHHHHHHCCEEE
PVHWNIENEKWASVLDKSRKVSSSILSIPIDWRYDKKDMHYILEQLISII
EEEECCCCHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHC
>Mature Secondary Structure
MKPIGGELWFDEIIFNDAENNFQHLNAVFLNGGQSAIQFIIEDIDFKEDEHVLMPSYLCP
CCCCCCCHHHHHHHHCCCCCCHHHEEEEEECCCHHHHHHHHHHCCCCCCCCEECCHHHHH
TILYNFQRSNIKFIFYEVNEDLSIDLKDMENKINQYKVRTVYFIDYFGFYHNDNVIDYLR
HHHHHHCCCCEEEEEEEECCCCEEEHHHHHHHHHHEEEEEEEEEEEECEECCCCHHHHHH
KIQKTGVILVEDAVQMLWFSKQEKFIGDYVFNSYRKFLPIDGSVVLCNKSMELGETKDRY
HHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHH
YELIHEARTKKTAYVKSNIGSEEEFLKLFAEADEAYYQRRNASGMDSKSKKLLNKVKHQQ
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
IKQLRIDNYNYLHEKLTDLNDVKVMFNKELITDNVPLTLPIMIKNRNFVRKELRKHSIYC
HHHHHCCCCHHHHHHHCCCCCEEEEEEHHHCCCCCCEEEEEEECCCHHHHHHHHHCCEEE
PVHWNIENEKWASVLDKSRKVSSSILSIPIDWRYDKKDMHYILEQLISII
EEEECCCCHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA