Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170756636

Identifier: 170756636

GI number: 170756636

Start: 2898931

End: 2900016

Strand: Reverse

Name: 170756636

Synonym: CLD_1845

Alternate gene names: NA

Gene position: 2900016-2898931 (Counterclockwise)

Preceding gene: 170757445

Following gene: 170756924

Centisome position: 73.27

GC content: 25.41

Gene sequence:

>1086_bases
ATGAAGATAACATTATGTATGATAGTTAAAAATGAAGAAAAAAATATAAAAAGGTGTTTAGAAAGTGCATTAAAAATTGT
AGATGACGCAATAATTGTAGATACTGGTTCTACAGATAGAACATTAGATATAATAAAAACTTTTGATAAAAAGATTCAAA
TAATCAATTATAATTGGGAAGATGACTTTTCTAAAGCTAGAAATTTAAGTATAAAAAATGCAAATGGTGATTGGATCCTT
GTACTTGATGCAGATGAAGAATTAATATGTGATAAGGAGAAACTGATATCAAAACTCAAAGATACTAATTTAAATTCATT
TAATGTAACTTGGATAAATGTTCTTGATAATAAGGGAGAGTTAGATTCTTTTGCTTATAATAGAGTGTTCAGAAATAAGG
GATATAGATATTATAGGGCCATACACGAACAACTTGATGTGAATGAAAAGGAAAGTGGAATATTAGAAGAAGAAATATTT
AAAATAATACATTATGGTTATACAAAAGAAAGCATGGAAAAAAATAATAAAATAAGCAGAAACTTAAAAATATTGCTTGA
TTGTTATAATAATGATTCAGAAGATCCCTTTGTTTGTTATCATCTTGGTGCTACTTATGCATCTTCTAGAGATTATAAAA
ATGCTTTAAATTATTTTGTTAGAAGCTATGAATTAGGGCTTAATAAAGGTTTTGGGGCATATTATTATGAACTCATAAAA
AGAATGAGTGAATGTATTTATTTATTACATGATTATAAACTTTGCATAGATTTAATAACAGAACTTTTAAGTAAAGAAGA
TGTTAGAAATTTTACTGATCTTTATTATATTGTTGGAAGCTGTTTTTATAAGATGAAAGATCATGAAAATGCAAAAAAAA
TGTTCAATAAATGTATTGAATTAGGAGAAAGGCAAGATTTCCCTACTTTCGCGGGAAGAGGAAGTTTTCTTTCAGAATTA
ATGCTTGCTAGAATATATGTTGATAAAAATGATTATAAAAATGCAAAAATGTTTTACTTAAAGGTGTTACAATCTAAGGA
GCGTTTGTCTAAAGATATTATTGAAGAAATATATTGTTATATATAA

Upstream 100 bases:

>100_bases
AATAATATAATTCTATATGGAGATATAGATAGAGTAAATAATTTCATATATAATCATTAGTTAAAGCGCTATATATAAAG
TTAATTTTAGGAGTTTAATT

Downstream 100 bases:

>100_bases
TTAAATGGAAATAACAATATATTTAAAAGATATTATTTATAAAAGATACAATCAACGAATAATTTGCAAAAATTTGGAGG
TTTATTATGGAAAAATCATT

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MKITLCMIVKNEEKNIKRCLESALKIVDDAIIVDTGSTDRTLDIIKTFDKKIQIINYNWEDDFSKARNLSIKNANGDWIL
VLDADEELICDKEKLISKLKDTNLNSFNVTWINVLDNKGELDSFAYNRVFRNKGYRYYRAIHEQLDVNEKESGILEEEIF
KIIHYGYTKESMEKNNKISRNLKILLDCYNNDSEDPFVCYHLGATYASSRDYKNALNYFVRSYELGLNKGFGAYYYELIK
RMSECIYLLHDYKLCIDLITELLSKEDVRNFTDLYYIVGSCFYKMKDHENAKKMFNKCIELGERQDFPTFAGRGSFLSEL
MLARIYVDKNDYKNAKMFYLKVLQSKERLSKDIIEEIYCYI

Sequences:

>Translated_361_residues
MKITLCMIVKNEEKNIKRCLESALKIVDDAIIVDTGSTDRTLDIIKTFDKKIQIINYNWEDDFSKARNLSIKNANGDWIL
VLDADEELICDKEKLISKLKDTNLNSFNVTWINVLDNKGELDSFAYNRVFRNKGYRYYRAIHEQLDVNEKESGILEEEIF
KIIHYGYTKESMEKNNKISRNLKILLDCYNNDSEDPFVCYHLGATYASSRDYKNALNYFVRSYELGLNKGFGAYYYELIK
RMSECIYLLHDYKLCIDLITELLSKEDVRNFTDLYYIVGSCFYKMKDHENAKKMFNKCIELGERQDFPTFAGRGSFLSEL
MLARIYVDKNDYKNAKMFYLKVLQSKERLSKDIIEEIYCYI
>Mature_361_residues
MKITLCMIVKNEEKNIKRCLESALKIVDDAIIVDTGSTDRTLDIIKTFDKKIQIINYNWEDDFSKARNLSIKNANGDWIL
VLDADEELICDKEKLISKLKDTNLNSFNVTWINVLDNKGELDSFAYNRVFRNKGYRYYRAIHEQLDVNEKESGILEEEIF
KIIHYGYTKESMEKNNKISRNLKILLDCYNNDSEDPFVCYHLGATYASSRDYKNALNYFVRSYELGLNKGFGAYYYELIK
RMSECIYLLHDYKLCIDLITELLSKEDVRNFTDLYYIVGSCFYKMKDHENAKKMFNKCIELGERQDFPTFAGRGSFLSEL
MLARIYVDKNDYKNAKMFYLKVLQSKERLSKDIIEEIYCYI

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 5 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173
- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00535 Glycos_transf_2; PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 42623; Mature: 42623

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKITLCMIVKNEEKNIKRCLESALKIVDDAIIVDTGSTDRTLDIIKTFDKKIQIINYNWE
CEEEEEEEEECCHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHCCEEEEEEECCC
DDFSKARNLSIKNANGDWILVLDADEELICDKEKLISKLKDTNLNSFNVTWINVLDNKGE
HHHHHHHCCEEEECCCCEEEEEECCCHHHCCHHHHHHHHHCCCCCEEEEEEEEEECCCCC
LDSFAYNRVFRNKGYRYYRAIHEQLDVNEKESGILEEEIFKIIHYGYTKESMEKNNKISR
HHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHCCCCHHHHHHCCHHHC
NLKILLDCYNNDSEDPFVCYHLGATYASSRDYKNALNYFVRSYELGLNKGFGAYYYELIK
CEEEEEEECCCCCCCCEEEEECCCHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
RMSECIYLLHDYKLCIDLITELLSKEDVRNFTDLYYIVGSCFYKMKDHENAKKMFNKCIE
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LGERQDFPTFAGRGSFLSELMLARIYVDKNDYKNAKMFYLKVLQSKERLSKDIIEEIYCY
HCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
I
C
>Mature Secondary Structure
MKITLCMIVKNEEKNIKRCLESALKIVDDAIIVDTGSTDRTLDIIKTFDKKIQIINYNWE
CEEEEEEEEECCHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHCCEEEEEEECCC
DDFSKARNLSIKNANGDWILVLDADEELICDKEKLISKLKDTNLNSFNVTWINVLDNKGE
HHHHHHHCCEEEECCCCEEEEEECCCHHHCCHHHHHHHHHCCCCCEEEEEEEEEECCCCC
LDSFAYNRVFRNKGYRYYRAIHEQLDVNEKESGILEEEIFKIIHYGYTKESMEKNNKISR
HHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHCCCCHHHHHHCCHHHC
NLKILLDCYNNDSEDPFVCYHLGATYASSRDYKNALNYFVRSYELGLNKGFGAYYYELIK
CEEEEEEECCCCCCCCEEEEECCCHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
RMSECIYLLHDYKLCIDLITELLSKEDVRNFTDLYYIVGSCFYKMKDHENAKKMFNKCIE
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LGERQDFPTFAGRGSFLSELMLARIYVDKNDYKNAKMFYLKVLQSKERLSKDIIEEIYCY
HCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
I
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8123787 [H]