Click here to switch to the map view.

The map label for this gene is yvaQ [H]

Identifier: 170756568

GI number: 170756568

Start: 2047050

End: 2048759

Strand: Reverse

Name: yvaQ [H]

Synonym: CLD_2708

Alternate gene names: 170756568

Gene position: 2048759-2047050 (Counterclockwise)

Preceding gene: 170754979

Following gene: 170757640

Centisome position: 51.76

GC content: 31.11

Gene sequence:

>1710_bases
TTGGTAAAAACGATAAAGGGTAAACTAGTTTTTCTTGTCGCTATATTAGTAGGTGCAATTATATATATGGGAGGATATTC
AATAAAAAATTTAGATAATGTAAATGAAAAGTCTACTGAAATTTCTAAAAAATGGGTACCTGCCATGGTATATTCAGAGG
AATTAAATACAATGACTTCAGATCTTAGAATACTAGAATATGATCATATTATTTCTACTAATGCAGAAATGATGAATGAA
AAAGAAAAAGAAATGGAGGAAAAAAGTAAGGAAATAGAAAAATATTTAGCTCTTTATAAAAAAACAGTGGACTCAAAAGA
GGATGAGGAGTTATTTAATACTGTAGAAAAGGAGTGGAATGAATATTTACAACAAAATAAGAAAGTAATAGGCTTAAGTA
GACAATTAAAAACAGAGGAAGCTGCAAAGATAATGAGAGAAGAATCTAAACAATCCTTTGATAGAGCCTCAGATTCTTTA
TTGAAATTAGCTCAGTTTAATAAAGAGAAAACAGAAAAGGCTAGTTTAGAAGGAGATAAGGATTTTGATACTGCTATGAA
AATAAATTTAACTTTAATGGTATTATTATCTGTTATAGGTGCAGTTTTAGGAATGCTTATTATCAAGGGTATAAGAAAGT
CATTAAATGTTTTAAAGGGAGAATTAGATGAATTATCTGAAAGAGGTGGAGATTTAACTCAAGAAATAAAAGTTAATTCT
AAGGATGAAATAAATGATCTTGCTAAAAGTTTAAATAAGTTCATACAAAATATAAAGGATATTATTAAAACTGTTAATGA
AAGTGCAGATAGCATTGAAATTGTTGTAGATAGTATAAAAACTAATGTTACAGATTTAAATGATGATGTAGAAGAGGTTT
CTGCAACTACAGAAGAACTTTCTTCTAATATGCAAGAAACTGCAGCTTCAGCAGAAGAGATGTCAGCAACTTCTCAAGAT
ATAGAAAAAGCTATTGAATCCATTGCACAAAAATCCCAGGAAGGTGCTACTCAAGCGGGAGAAATAAATAAGAGAGCAGA
ACACACAAAAGACAATGTACAAGCTTCTCAGAAAAAAGCCAAAGAAATATTTGCAAGCACAAAAGTAGAACTTGAAAAGG
CTATAGAATCCTCAAAGGTTGTAGAACAGATAAATGTGCTCTCAGAATCTATAATGGAAATAACATCACAAACAAACCTT
CTTGCATTAAATGCAGCTATTGAAGCTGCAAGAGCAGGAGAGGCAGGAAAGGGCTTTTCAGTTGTAGCTGATGAGATAAG
AAAGCTTGCGGAACAGTCAAAGGATACGGTAACAGAAATACAAAATATAACAGTTAAAGTAATAGAATCAGTTAAGAATC
TTTCTGATAGCTCAAGTAATCTATTAACTTTTGTGTCTACAGATATGGATAATGATTATAAGACTATGCTAAGCGTAGCA
GATCAATATAGTGAAGATGCCAGCTTTGTTGATACACTTGTAACGGATTTTAGTTCAACCTCAGAGGAACTCTTAGCATC
TCTACAAGACGTAGTCAAAACTATAGAGGGAGTAGCACAAGCTGCTAGTGAAGGTGCTGGAGGCACTACAGATATTGCAT
GTAGAATACTGGAAGTAAATAATAAATCAAATGATGTGCTTCAAGAAGCTTTAAAATCAGAAGAAAACGCTAATAAATTG
AAAAAAGAAATTTCTAAATTTAAAATTTAA

Upstream 100 bases:

>100_bases
TATATAAATTATTGTGTGTTTATAAATTATGTATTTAAAGTATAGGGGGCTACAAAGGCAGCCATGGAATAAAGAATAAA
ACAATAAGGAGGAAATAAAA

Downstream 100 bases:

>100_bases
AAAGTAATTTAGTATTAGTTTTTTATTCTAATGGCTACCAATATAATACTTTTATACTTATTAGATGATATTTACTAGAA
ATTTAGGATTTCAAGTTATA

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: Methyl-accepting chemotaxis protein [H]

Number of amino acids: Translated: 569; Mature: 569

Protein sequence:

>569_residues
MVKTIKGKLVFLVAILVGAIIYMGGYSIKNLDNVNEKSTEISKKWVPAMVYSEELNTMTSDLRILEYDHIISTNAEMMNE
KEKEMEEKSKEIEKYLALYKKTVDSKEDEELFNTVEKEWNEYLQQNKKVIGLSRQLKTEEAAKIMREESKQSFDRASDSL
LKLAQFNKEKTEKASLEGDKDFDTAMKINLTLMVLLSVIGAVLGMLIIKGIRKSLNVLKGELDELSERGGDLTQEIKVNS
KDEINDLAKSLNKFIQNIKDIIKTVNESADSIEIVVDSIKTNVTDLNDDVEEVSATTEELSSNMQETAASAEEMSATSQD
IEKAIESIAQKSQEGATQAGEINKRAEHTKDNVQASQKKAKEIFASTKVELEKAIESSKVVEQINVLSESIMEITSQTNL
LALNAAIEAARAGEAGKGFSVVADEIRKLAEQSKDTVTEIQNITVKVIESVKNLSDSSSNLLTFVSTDMDNDYKTMLSVA
DQYSEDASFVDTLVTDFSSTSEELLASLQDVVKTIEGVAQAASEGAGGTTDIACRILEVNNKSNDVLQEALKSEENANKL
KKEISKFKI

Sequences:

>Translated_569_residues
MVKTIKGKLVFLVAILVGAIIYMGGYSIKNLDNVNEKSTEISKKWVPAMVYSEELNTMTSDLRILEYDHIISTNAEMMNE
KEKEMEEKSKEIEKYLALYKKTVDSKEDEELFNTVEKEWNEYLQQNKKVIGLSRQLKTEEAAKIMREESKQSFDRASDSL
LKLAQFNKEKTEKASLEGDKDFDTAMKINLTLMVLLSVIGAVLGMLIIKGIRKSLNVLKGELDELSERGGDLTQEIKVNS
KDEINDLAKSLNKFIQNIKDIIKTVNESADSIEIVVDSIKTNVTDLNDDVEEVSATTEELSSNMQETAASAEEMSATSQD
IEKAIESIAQKSQEGATQAGEINKRAEHTKDNVQASQKKAKEIFASTKVELEKAIESSKVVEQINVLSESIMEITSQTNL
LALNAAIEAARAGEAGKGFSVVADEIRKLAEQSKDTVTEIQNITVKVIESVKNLSDSSSNLLTFVSTDMDNDYKTMLSVA
DQYSEDASFVDTLVTDFSSTSEELLASLQDVVKTIEGVAQAASEGAGGTTDIACRILEVNNKSNDVLQEALKSEENANKL
KKEISKFKI
>Mature_569_residues
MVKTIKGKLVFLVAILVGAIIYMGGYSIKNLDNVNEKSTEISKKWVPAMVYSEELNTMTSDLRILEYDHIISTNAEMMNE
KEKEMEEKSKEIEKYLALYKKTVDSKEDEELFNTVEKEWNEYLQQNKKVIGLSRQLKTEEAAKIMREESKQSFDRASDSL
LKLAQFNKEKTEKASLEGDKDFDTAMKINLTLMVLLSVIGAVLGMLIIKGIRKSLNVLKGELDELSERGGDLTQEIKVNS
KDEINDLAKSLNKFIQNIKDIIKTVNESADSIEIVVDSIKTNVTDLNDDVEEVSATTEELSSNMQETAASAEEMSATSQD
IEKAIESIAQKSQEGATQAGEINKRAEHTKDNVQASQKKAKEIFASTKVELEKAIESSKVVEQINVLSESIMEITSQTNL
LALNAAIEAARAGEAGKGFSVVADEIRKLAEQSKDTVTEIQNITVKVIESVKNLSDSSSNLLTFVSTDMDNDYKTMLSVA
DQYSEDASFVDTLVTDFSSTSEELLASLQDVVKTIEGVAQAASEGAGGTTDIACRILEVNNKSNDVLQEALKSEENANKL
KKEISKFKI

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=263, Percent_Identity=32.6996197718631, Blast_Score=105, Evalue=6e-24,
Organism=Escherichia coli, GI2367378, Length=463, Percent_Identity=26.9978401727862, Blast_Score=101, Evalue=1e-22,
Organism=Escherichia coli, GI1788194, Length=353, Percent_Identity=27.4787535410765, Blast_Score=99, Evalue=7e-22,
Organism=Escherichia coli, GI1787690, Length=412, Percent_Identity=26.2135922330097, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1789453, Length=260, Percent_Identity=25.7692307692308, Blast_Score=75, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 62956; Mature: 62956

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKTIKGKLVFLVAILVGAIIYMGGYSIKNLDNVNEKSTEISKKWVPAMVYSEELNTMTS
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DLRILEYDHIISTNAEMMNEKEKEMEEKSKEIEKYLALYKKTVDSKEDEELFNTVEKEWN
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
EYLQQNKKVIGLSRQLKTEEAAKIMREESKQSFDRASDSLLKLAQFNKEKTEKASLEGDK
HHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCC
DFDTAMKINLTLMVLLSVIGAVLGMLIIKGIRKSLNVLKGELDELSERGGDLTQEIKVNS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCC
KDEINDLAKSLNKFIQNIKDIIKTVNESADSIEIVVDSIKTNVTDLNDDVEEVSATTEEL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
SSNMQETAASAEEMSATSQDIEKAIESIAQKSQEGATQAGEINKRAEHTKDNVQASQKKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
KEIFASTKVELEKAIESSKVVEQINVLSESIMEITSQTNLLALNAAIEAARAGEAGKGFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCCHH
VVADEIRKLAEQSKDTVTEIQNITVKVIESVKNLSDSSSNLLTFVSTDMDNDYKTMLSVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHH
DQYSEDASFVDTLVTDFSSTSEELLASLQDVVKTIEGVAQAASEGAGGTTDIACRILEVN
HHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEEEECC
NKSNDVLQEALKSEENANKLKKEISKFKI
CCCHHHHHHHHHCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVKTIKGKLVFLVAILVGAIIYMGGYSIKNLDNVNEKSTEISKKWVPAMVYSEELNTMTS
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DLRILEYDHIISTNAEMMNEKEKEMEEKSKEIEKYLALYKKTVDSKEDEELFNTVEKEWN
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
EYLQQNKKVIGLSRQLKTEEAAKIMREESKQSFDRASDSLLKLAQFNKEKTEKASLEGDK
HHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCC
DFDTAMKINLTLMVLLSVIGAVLGMLIIKGIRKSLNVLKGELDELSERGGDLTQEIKVNS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCC
KDEINDLAKSLNKFIQNIKDIIKTVNESADSIEIVVDSIKTNVTDLNDDVEEVSATTEEL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
SSNMQETAASAEEMSATSQDIEKAIESIAQKSQEGATQAGEINKRAEHTKDNVQASQKKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
KEIFASTKVELEKAIESSKVVEQINVLSESIMEITSQTNLLALNAAIEAARAGEAGKGFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCCHH
VVADEIRKLAEQSKDTVTEIQNITVKVIESVKNLSDSSSNLLTFVSTDMDNDYKTMLSVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHH
DQYSEDASFVDTLVTDFSSTSEELLASLQDVVKTIEGVAQAASEGAGGTTDIACRILEVN
HHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEEEECC
NKSNDVLQEALKSEENANKLKKEISKFKI
CCCHHHHHHHHHCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]