Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170756544

Identifier: 170756544

GI number: 170756544

Start: 493318

End: 494013

Strand: Direct

Name: 170756544

Synonym: CLD_0357

Alternate gene names: NA

Gene position: 493318-494013 (Clockwise)

Preceding gene: 170755949

Following gene: 170757660

Centisome position: 12.46

GC content: 22.27

Gene sequence:

>696_bases
ATGAAAGATATATTTTTAATGGGAGAAAGGTTTCAATATATTTTAAAAACAAAAAAAAGAAAAACTATTTCCATAAAAAT
TGGAAAAGAATTTATTATAGAAGTTACAGCGCCTTTAGGAACTAATGAATATACAATAGAGCAAGTTCTTAAAAAAGAGG
AAAAATGGATTATTAAAAAGATAAAAAAGCTTAAAGAAGTAGAAAATTTCGATGAATATTATTATTTGGGTGAATTGTAT
TATTTAAAAATTAAAGAGGTAAAGTCTTTATATTTTAAATTAGAACTAGATAGTAATAAATTTATGGTTTATATAAATTC
TGGTATTTTAAAAGAAAAAAGGGAAGTGATAATAAAAGATAATCTAGAAAAATTTTATAAAGAGCAGGCTGTAAAAGTAT
TAAAGGAAAGAACAGATTATTATTCTAATATATTAAAAGTTGCACCTAAAAATATAGTAGTAAAAAATCAAAAAACTTTA
TGGGGAAGTTGTTCTTCTAAAGGAAATATAAATTACAATTATAAAATAGTTATGGCTCCTTTAAAAATTTTAGATTACAT
AGTTGTTCATGAACTTTGTCATTTAGTACATATGAATCACTCTAAGGATTTTTGGCACTTAGTTGAAAGTATAATTCCTG
ATTTTAAAGAAAGAAGAAATTGGCTTAAAGAAAATGGGTATAAACTAAAAATTTAA

Upstream 100 bases:

>100_bases
GGAAAATAGAATATAATATTTAACATAGACAAAAAGGTGTCTCAAAATTAAATCTATTTTTAGACACTTTTTTTTATTTA
AGATAAAAGAAGGATATAAA

Downstream 100 bases:

>100_bases
TAGCTTTAATAGTTGTTTTTGATTATTATCTCTAGCAATGGATATAAATATAAATAGTAAAAAATAGTTGTTGTGGAGGT
AGTAGTATGAATAGAGTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: Metal-Dependent Hydrolase; Zinc Metallopeptidase; Zinc-Dependent Protease; Zinc Protease; Zinc Metallopeptidases-Like Protein; Conserved Metal-Dependent Hydrolase; Zinc Metallopeptidase-Like Protein; Zinc Metallopeptidase Protein; Protease; Zinc Metallo Protease

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MKDIFLMGERFQYILKTKKRKTISIKIGKEFIIEVTAPLGTNEYTIEQVLKKEEKWIIKKIKKLKEVENFDEYYYLGELY
YLKIKEVKSLYFKLELDSNKFMVYINSGILKEKREVIIKDNLEKFYKEQAVKVLKERTDYYSNILKVAPKNIVVKNQKTL
WGSCSSKGNINYNYKIVMAPLKILDYIVVHELCHLVHMNHSKDFWHLVESIIPDFKERRNWLKENGYKLKI

Sequences:

>Translated_231_residues
MKDIFLMGERFQYILKTKKRKTISIKIGKEFIIEVTAPLGTNEYTIEQVLKKEEKWIIKKIKKLKEVENFDEYYYLGELY
YLKIKEVKSLYFKLELDSNKFMVYINSGILKEKREVIIKDNLEKFYKEQAVKVLKERTDYYSNILKVAPKNIVVKNQKTL
WGSCSSKGNINYNYKIVMAPLKILDYIVVHELCHLVHMNHSKDFWHLVESIIPDFKERRNWLKENGYKLKI
>Mature_231_residues
MKDIFLMGERFQYILKTKKRKTISIKIGKEFIIEVTAPLGTNEYTIEQVLKKEEKWIIKKIKKLKEVENFDEYYYLGELY
YLKIKEVKSLYFKLELDSNKFMVYINSGILKEKREVIIKDNLEKFYKEQAVKVLKERTDYYSNILKVAPKNIVVKNQKTL
WGSCSSKGNINYNYKIVMAPLKILDYIVVHELCHLVHMNHSKDFWHLVESIIPDFKERRNWLKENGYKLKI

Specific function: Unknown

COG id: COG1451

COG function: function code R; Predicted metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27779; Mature: 27779

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDIFLMGERFQYILKTKKRKTISIKIGKEFIIEVTAPLGTNEYTIEQVLKKEEKWIIKK
CCCEEEEHHHHHHHHHHCCCEEEEEEECCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
IKKLKEVENFDEYYYLGELYYLKIKEVKSLYFKLELDSNKFMVYINSGILKEKREVIIKD
HHHHHHHHCHHHEEEECEEEEEEHHHHHEEEEEEEECCCEEEEEECCCCHHHHHHHHHHH
NLEKFYKEQAVKVLKERTDYYSNILKVAPKNIVVKNQKTLWGSCSSKGNINYNYKIVMAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEECCCCCCCCCEEEEEEEHH
LKILDYIVVHELCHLVHMNHSKDFWHLVESIIPDFKERRNWLKENGYKLKI
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHCCEEECC
>Mature Secondary Structure
MKDIFLMGERFQYILKTKKRKTISIKIGKEFIIEVTAPLGTNEYTIEQVLKKEEKWIIKK
CCCEEEEHHHHHHHHHHCCCEEEEEEECCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
IKKLKEVENFDEYYYLGELYYLKIKEVKSLYFKLELDSNKFMVYINSGILKEKREVIIKD
HHHHHHHHCHHHEEEECEEEEEEHHHHHEEEEEEEECCCEEEEEECCCCHHHHHHHHHHH
NLEKFYKEQAVKVLKERTDYYSNILKVAPKNIVVKNQKTLWGSCSSKGNINYNYKIVMAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEECCCCCCCCCEEEEEEEHH
LKILDYIVVHELCHLVHMNHSKDFWHLVESIIPDFKERRNWLKENGYKLKI
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA