| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756544
Identifier: 170756544
GI number: 170756544
Start: 493318
End: 494013
Strand: Direct
Name: 170756544
Synonym: CLD_0357
Alternate gene names: NA
Gene position: 493318-494013 (Clockwise)
Preceding gene: 170755949
Following gene: 170757660
Centisome position: 12.46
GC content: 22.27
Gene sequence:
>696_bases ATGAAAGATATATTTTTAATGGGAGAAAGGTTTCAATATATTTTAAAAACAAAAAAAAGAAAAACTATTTCCATAAAAAT TGGAAAAGAATTTATTATAGAAGTTACAGCGCCTTTAGGAACTAATGAATATACAATAGAGCAAGTTCTTAAAAAAGAGG AAAAATGGATTATTAAAAAGATAAAAAAGCTTAAAGAAGTAGAAAATTTCGATGAATATTATTATTTGGGTGAATTGTAT TATTTAAAAATTAAAGAGGTAAAGTCTTTATATTTTAAATTAGAACTAGATAGTAATAAATTTATGGTTTATATAAATTC TGGTATTTTAAAAGAAAAAAGGGAAGTGATAATAAAAGATAATCTAGAAAAATTTTATAAAGAGCAGGCTGTAAAAGTAT TAAAGGAAAGAACAGATTATTATTCTAATATATTAAAAGTTGCACCTAAAAATATAGTAGTAAAAAATCAAAAAACTTTA TGGGGAAGTTGTTCTTCTAAAGGAAATATAAATTACAATTATAAAATAGTTATGGCTCCTTTAAAAATTTTAGATTACAT AGTTGTTCATGAACTTTGTCATTTAGTACATATGAATCACTCTAAGGATTTTTGGCACTTAGTTGAAAGTATAATTCCTG ATTTTAAAGAAAGAAGAAATTGGCTTAAAGAAAATGGGTATAAACTAAAAATTTAA
Upstream 100 bases:
>100_bases GGAAAATAGAATATAATATTTAACATAGACAAAAAGGTGTCTCAAAATTAAATCTATTTTTAGACACTTTTTTTTATTTA AGATAAAAGAAGGATATAAA
Downstream 100 bases:
>100_bases TAGCTTTAATAGTTGTTTTTGATTATTATCTCTAGCAATGGATATAAATATAAATAGTAAAAAATAGTTGTTGTGGAGGT AGTAGTATGAATAGAGTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: Metal-Dependent Hydrolase; Zinc Metallopeptidase; Zinc-Dependent Protease; Zinc Protease; Zinc Metallopeptidases-Like Protein; Conserved Metal-Dependent Hydrolase; Zinc Metallopeptidase-Like Protein; Zinc Metallopeptidase Protein; Protease; Zinc Metallo Protease
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MKDIFLMGERFQYILKTKKRKTISIKIGKEFIIEVTAPLGTNEYTIEQVLKKEEKWIIKKIKKLKEVENFDEYYYLGELY YLKIKEVKSLYFKLELDSNKFMVYINSGILKEKREVIIKDNLEKFYKEQAVKVLKERTDYYSNILKVAPKNIVVKNQKTL WGSCSSKGNINYNYKIVMAPLKILDYIVVHELCHLVHMNHSKDFWHLVESIIPDFKERRNWLKENGYKLKI
Sequences:
>Translated_231_residues MKDIFLMGERFQYILKTKKRKTISIKIGKEFIIEVTAPLGTNEYTIEQVLKKEEKWIIKKIKKLKEVENFDEYYYLGELY YLKIKEVKSLYFKLELDSNKFMVYINSGILKEKREVIIKDNLEKFYKEQAVKVLKERTDYYSNILKVAPKNIVVKNQKTL WGSCSSKGNINYNYKIVMAPLKILDYIVVHELCHLVHMNHSKDFWHLVESIIPDFKERRNWLKENGYKLKI >Mature_231_residues MKDIFLMGERFQYILKTKKRKTISIKIGKEFIIEVTAPLGTNEYTIEQVLKKEEKWIIKKIKKLKEVENFDEYYYLGELY YLKIKEVKSLYFKLELDSNKFMVYINSGILKEKREVIIKDNLEKFYKEQAVKVLKERTDYYSNILKVAPKNIVVKNQKTL WGSCSSKGNINYNYKIVMAPLKILDYIVVHELCHLVHMNHSKDFWHLVESIIPDFKERRNWLKENGYKLKI
Specific function: Unknown
COG id: COG1451
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27779; Mature: 27779
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDIFLMGERFQYILKTKKRKTISIKIGKEFIIEVTAPLGTNEYTIEQVLKKEEKWIIKK CCCEEEEHHHHHHHHHHCCCEEEEEEECCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH IKKLKEVENFDEYYYLGELYYLKIKEVKSLYFKLELDSNKFMVYINSGILKEKREVIIKD HHHHHHHHCHHHEEEECEEEEEEHHHHHEEEEEEEECCCEEEEEECCCCHHHHHHHHHHH NLEKFYKEQAVKVLKERTDYYSNILKVAPKNIVVKNQKTLWGSCSSKGNINYNYKIVMAP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEECCCCCCCCCEEEEEEEHH LKILDYIVVHELCHLVHMNHSKDFWHLVESIIPDFKERRNWLKENGYKLKI HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHCCEEECC >Mature Secondary Structure MKDIFLMGERFQYILKTKKRKTISIKIGKEFIIEVTAPLGTNEYTIEQVLKKEEKWIIKK CCCEEEEHHHHHHHHHHCCCEEEEEEECCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH IKKLKEVENFDEYYYLGELYYLKIKEVKSLYFKLELDSNKFMVYINSGILKEKREVIIKD HHHHHHHHCHHHEEEECEEEEEEHHHHHEEEEEEEECCCEEEEEECCCCHHHHHHHHHHH NLEKFYKEQAVKVLKERTDYYSNILKVAPKNIVVKNQKTLWGSCSSKGNINYNYKIVMAP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEECCCCCCCCCEEEEEEEHH LKILDYIVVHELCHLVHMNHSKDFWHLVESIIPDFKERRNWLKENGYKLKI HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA