Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170755949

Identifier: 170755949

GI number: 170755949

Start: 492416

End: 493240

Strand: Direct

Name: 170755949

Synonym: CLD_0358

Alternate gene names: NA

Gene position: 492416-493240 (Clockwise)

Preceding gene: 170756006

Following gene: 170756544

Centisome position: 12.44

GC content: 27.39

Gene sequence:

>825_bases
ATGAAGCATCAAAAGGAATTTAATAGAGAAGAAGCTTTAGATATAAAGTTATCATTATTAGAAAAAGATCAGGATGTAAT
GTCAAAAGTACAAAAGGAAATACTAGAAGAAGAACTAGATGAATTAGTTCCTATAAAAGAAGGAGAAATTAATGTAGCAG
GTATATATGCTTATGACCTCGGAGATAAGTACGAAGTTAAGGCTTATTTGAGAAATGGTATAGAAAAAGAAATAAATTTT
GAAGAGATTCCTTTTAAAATAATAAATTCTAAGGGAGAGCTTTTAGCATCTCAAACCTTTGATTTAAAATCAATGGGAAA
TATTCCATCTTATTGCGCTAGGCCGTGTGTTTTATATTTTGATAAAAAAAATGTGTTTGTAGATAAAATACCTGGGGATG
ATTGGAAATTAGTTTTTGATAATTCTTTAAAGGCTGTTAGAAATTTAATGGTAGATATTGAAAATTTACCAGAGGGAATA
GATGCTAAAAGTAAGAAAGTTTATACAGATTTTTTAGAAGGACTTTCAGATTTAAAAGAAGGAGAAGTAAGCTTTTCAAA
ATTTAGTATAGGTATAAATGAAAATGGTCATTTATTAGTTACTATAGTTGTTAGAAATGGTTGCAATAAAGGAATAAATA
TAGAAAAATTACCTATGACCATTAGAGATGAAAAAGGCAATTTTGTTGTTTCAGAAGTATTTGAACTAAAAGATCTAAAG
GTTAGTCCAATGAAAGCTAAAGTGTGCAATTTTGCTTTTCCATTACAAATTAAGGAAAAAGCAGTAATACCTTTAGATTC
ATGGAAAATAGAATATAATATTTAA

Upstream 100 bases:

>100_bases
TTAATTAAATATACAATTTTACTTCAAATTAAGTTTGATTTAGAAATTTGTACATATTATAATATAATTTGTAATATAAA
TTATATTTGGAGGAATTTAG

Downstream 100 bases:

>100_bases
CATAGACAAAAAGGTGTCTCAAAATTAAATCTATTTTTAGACACTTTTTTTTATTTAAGATAAAAGAAGGATATAAAATG
AAAGATATATTTTTAATGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MKHQKEFNREEALDIKLSLLEKDQDVMSKVQKEILEEELDELVPIKEGEINVAGIYAYDLGDKYEVKAYLRNGIEKEINF
EEIPFKIINSKGELLASQTFDLKSMGNIPSYCARPCVLYFDKKNVFVDKIPGDDWKLVFDNSLKAVRNLMVDIENLPEGI
DAKSKKVYTDFLEGLSDLKEGEVSFSKFSIGINENGHLLVTIVVRNGCNKGINIEKLPMTIRDEKGNFVVSEVFELKDLK
VSPMKAKVCNFAFPLQIKEKAVIPLDSWKIEYNI

Sequences:

>Translated_274_residues
MKHQKEFNREEALDIKLSLLEKDQDVMSKVQKEILEEELDELVPIKEGEINVAGIYAYDLGDKYEVKAYLRNGIEKEINF
EEIPFKIINSKGELLASQTFDLKSMGNIPSYCARPCVLYFDKKNVFVDKIPGDDWKLVFDNSLKAVRNLMVDIENLPEGI
DAKSKKVYTDFLEGLSDLKEGEVSFSKFSIGINENGHLLVTIVVRNGCNKGINIEKLPMTIRDEKGNFVVSEVFELKDLK
VSPMKAKVCNFAFPLQIKEKAVIPLDSWKIEYNI
>Mature_274_residues
MKHQKEFNREEALDIKLSLLEKDQDVMSKVQKEILEEELDELVPIKEGEINVAGIYAYDLGDKYEVKAYLRNGIEKEINF
EEIPFKIINSKGELLASQTFDLKSMGNIPSYCARPCVLYFDKKNVFVDKIPGDDWKLVFDNSLKAVRNLMVDIENLPEGI
DAKSKKVYTDFLEGLSDLKEGEVSFSKFSIGINENGHLLVTIVVRNGCNKGINIEKLPMTIRDEKGNFVVSEVFELKDLK
VSPMKAKVCNFAFPLQIKEKAVIPLDSWKIEYNI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31295; Mature: 31295

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHQKEFNREEALDIKLSLLEKDQDVMSKVQKEILEEELDELVPIKEGEINVAGIYAYDL
CCCCHHCCCHHHHEEEEEEHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEC
GDKYEVKAYLRNGIEKEINFEEIPFKIINSKGELLASQTFDLKSMGNIPSYCARPCVLYF
CCCHHHHHHHHCCCCCCCCHHHCCEEEECCCCCEEECCCCCHHHCCCCCHHHCCCEEEEE
DKKNVFVDKIPGDDWKLVFDNSLKAVRNLMVDIENLPEGIDAKSKKVYTDFLEGLSDLKE
ECCCEEEECCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHC
GEVSFSKFSIGINENGHLLVTIVVRNGCNKGINIEKLPMTIRDEKGNFVVSEVFELKDLK
CCCEEEEEEEEECCCCCEEEEEEEECCCCCCCCEEECCEEEECCCCCEEHHHHHHHHCCC
VSPMKAKVCNFAFPLQIKEKAVIPLDSWKIEYNI
CCCCHHHHHCEECCEEECCCEEEEECCEEEEEEC
>Mature Secondary Structure
MKHQKEFNREEALDIKLSLLEKDQDVMSKVQKEILEEELDELVPIKEGEINVAGIYAYDL
CCCCHHCCCHHHHEEEEEEHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEC
GDKYEVKAYLRNGIEKEINFEEIPFKIINSKGELLASQTFDLKSMGNIPSYCARPCVLYF
CCCHHHHHHHHCCCCCCCCHHHCCEEEECCCCCEEECCCCCHHHCCCCCHHHCCCEEEEE
DKKNVFVDKIPGDDWKLVFDNSLKAVRNLMVDIENLPEGIDAKSKKVYTDFLEGLSDLKE
ECCCEEEECCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHC
GEVSFSKFSIGINENGHLLVTIVVRNGCNKGINIEKLPMTIRDEKGNFVVSEVFELKDLK
CCCEEEEEEEEECCCCCEEEEEEEECCCCCCCCEEECCEEEECCCCCEEHHHHHHHHCCC
VSPMKAKVCNFAFPLQIKEKAVIPLDSWKIEYNI
CCCCHHHHHCEECCEEECCCEEEEECCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA