| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756532
Identifier: 170756532
GI number: 170756532
Start: 2299298
End: 2300032
Strand: Reverse
Name: 170756532
Synonym: CLD_2480
Alternate gene names: NA
Gene position: 2300032-2299298 (Counterclockwise)
Preceding gene: 170754582
Following gene: 170755912
Centisome position: 58.11
GC content: 30.2
Gene sequence:
>735_bases GTGGATAAATTTCGTAATATGAAAAAATCCCATATAGCCTTATTAGCGGTAATGTATATAGTATTAATGGGAAGTTTACC TAGATTTACAGGATGGGCAACTATTTTTTCAGCCATTGCAGTGGGAGGTTATTTTTTAAAGAACAAAAAAGACTTAAAAG AACTAACTAGGAAGAAGAAAAACTTTATATTTACAGGTATAATAATTTTATTTTTAATAGGAAGTTCTAGTATAGTTGCA GGAAATAATAAGTATGAACAAAAATTAATGGCAGAAAAAGCTGAACAACAACAAGAAATTAAGCAAGAAGAACAAAAAAA GATAGAAGAAAAGAAGTTAGCTGAAGAACAAAAAAGGATACAAGAGGAAGAAGCTAAGAAAAAAGCCGCAGAAGAAAAAA GAAAACAAGAAGAGGAAGCTAAGAAAAAGGCTGCAGAAGAACAAAAAAAGCAAGAAGAATTAAAAAGAAAACAAGAAGAA GAAAATAAAATAAAAGCTGAGAATGAACAAGCTCAAGCAGCATTTGCTCAATCAACAGGTAAAGGTAATTCAAATGATCA ATCTAATGAAAGTGAAAATGTAGATAATAATCAAAATTATACAGTATATAAAACCAGAACTGGATCTAAATATCATAGTT CAGGGTGTAGATATTTAAAGAAAAGCTGTTATGAAACAACAGTATCACAAGCACGAAATGAAGGGCTAAGTCCATGCAGT GTGTGTAATCCATAG
Upstream 100 bases:
>100_bases GTAAACATTGTATATTATTTTATATTTTGAAGGATTATCCATAATTCTGTAGAAGAATATTTGTGTAGGAAATATATTAT AAAAATATGGAGGGAGTATT
Downstream 100 bases:
>100_bases CATATAATAACATGTTAAAGATCAGTAATAATTGTACTTTTTAGGATATTGATGAATGTATTTTATCAATATCCTTTTAA ATTTATGTAATAAGTATTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MDKFRNMKKSHIALLAVMYIVLMGSLPRFTGWATIFSAIAVGGYFLKNKKDLKELTRKKKNFIFTGIIILFLIGSSSIVA GNNKYEQKLMAEKAEQQQEIKQEEQKKIEEKKLAEEQKRIQEEEAKKKAAEEKRKQEEEAKKKAAEEQKKQEELKRKQEE ENKIKAENEQAQAAFAQSTGKGNSNDQSNESENVDNNQNYTVYKTRTGSKYHSSGCRYLKKSCYETTVSQARNEGLSPCS VCNP
Sequences:
>Translated_244_residues MDKFRNMKKSHIALLAVMYIVLMGSLPRFTGWATIFSAIAVGGYFLKNKKDLKELTRKKKNFIFTGIIILFLIGSSSIVA GNNKYEQKLMAEKAEQQQEIKQEEQKKIEEKKLAEEQKRIQEEEAKKKAAEEKRKQEEEAKKKAAEEQKKQEELKRKQEE ENKIKAENEQAQAAFAQSTGKGNSNDQSNESENVDNNQNYTVYKTRTGSKYHSSGCRYLKKSCYETTVSQARNEGLSPCS VCNP >Mature_244_residues MDKFRNMKKSHIALLAVMYIVLMGSLPRFTGWATIFSAIAVGGYFLKNKKDLKELTRKKKNFIFTGIIILFLIGSSSIVA GNNKYEQKLMAEKAEQQQEIKQEEQKKIEEKKLAEEQKRIQEEEAKKKAAEEKRKQEEEAKKKAAEEQKKQEELKRKQEE ENKIKAENEQAQAAFAQSTGKGNSNDQSNESENVDNNQNYTVYKTRTGSKYHSSGCRYLKKSCYETTVSQARNEGLSPCS VCNP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27952; Mature: 27952
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKFRNMKKSHIALLAVMYIVLMGSLPRFTGWATIFSAIAVGGYFLKNKKDLKELTRKKK CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH NFIFTGIIILFLIGSSSIVAGNNKYEQKLMAEKAEQQQEIKQEEQKKIEEKKLAEEQKRI HHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QEEEAKKKAAEEKRKQEEEAKKKAAEEQKKQEELKRKQEEENKIKAENEQAQAAFAQSTG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KGNSNDQSNESENVDNNQNYTVYKTRTGSKYHSSGCRYLKKSCYETTVSQARNEGLSPCS CCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC VCNP CCCC >Mature Secondary Structure MDKFRNMKKSHIALLAVMYIVLMGSLPRFTGWATIFSAIAVGGYFLKNKKDLKELTRKKK CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH NFIFTGIIILFLIGSSSIVAGNNKYEQKLMAEKAEQQQEIKQEEQKKIEEKKLAEEQKRI HHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QEEEAKKKAAEEKRKQEEEAKKKAAEEQKKQEELKRKQEEENKIKAENEQAQAAFAQSTG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KGNSNDQSNESENVDNNQNYTVYKTRTGSKYHSSGCRYLKKSCYETTVSQARNEGLSPCS CCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC VCNP CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA