| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is yvgN [H]
Identifier: 170756521
GI number: 170756521
Start: 841863
End: 842414
Strand: Direct
Name: yvgN [H]
Synonym: CLD_0042
Alternate gene names: 170756521
Gene position: 841863-842414 (Clockwise)
Preceding gene: 170757587
Following gene: 170757580
Centisome position: 21.27
GC content: 30.25
Gene sequence:
>552_bases ATGTTTGAAAACAAATTATTTGAAAATAAATTATATGAAGGTATATATATGAAAGTAGTTACATTTAATGGAAGTCCTAA AAAGAACGGCAATACTTATGAAGTAATAAAGGCTGTAGCAGCAGAGTTAGAAAAAGAAAATATTGAAGTAGAAATTGTCC ATGTTGGTAATAAAGTAATGCGTGGATGTATGGATTGCGGTGGATGCAGCAGAAACATGAACGAGCGATGTGTTATGCAG AATGATATTCAAGTTGAAGCATGGTCACCACTCATGGGTGGTAAATTATTTGATAATGAAATATTGAAGGAAATTGCGGA TAATCATAATAAATCTATTGCTCAAATAATATTACGCTGGGATATACAAAATGGGCTTAGAAAGAAGATAATCAATGTTG TTAAGTTATCTGCCAAGGGGGAGTTTCAGGAAGCAATTAACTGTACAAATGATTATATAAATCAGATAAAGCAAGAGAGA AAAAATGCAAATAGTATATTGAAGCAATTAGAATTTATGAAAAATGAATTTAATACAAACTCTACACTTTAA
Upstream 100 bases:
>100_bases ATCAGTATGTAGATATTTCAATAAATCTTACTTAAAGGTAAGTAATCTAACGAAAAAGTACGTACTTGTCACTTGTATTA TTGAACCATATAATAAACAC
Downstream 100 bases:
>100_bases CACCATACTTTGTGATGGTGTTATTCTTTTATCAAAAGGAGGGAATAACACATGGAAGTAATAAAAGTTCATAATCTTTA TAAATCTTATGGGAATGTTC
Product: multimeric flavodoxin WrbA family protein
Products: NA
Alternate protein names: GR; Methylglyoxal reductase [H]
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MFENKLFENKLYEGIYMKVVTFNGSPKKNGNTYEVIKAVAAELEKENIEVEIVHVGNKVMRGCMDCGGCSRNMNERCVMQ NDIQVEAWSPLMGGKLFDNEILKEIADNHNKSIAQIILRWDIQNGLRKKIINVVKLSAKGEFQEAINCTNDYINQIKQER KNANSILKQLEFMKNEFNTNSTL
Sequences:
>Translated_183_residues MFENKLFENKLYEGIYMKVVTFNGSPKKNGNTYEVIKAVAAELEKENIEVEIVHVGNKVMRGCMDCGGCSRNMNERCVMQ NDIQVEAWSPLMGGKLFDNEILKEIADNHNKSIAQIILRWDIQNGLRKKIINVVKLSAKGEFQEAINCTNDYINQIKQER KNANSILKQLEFMKNEFNTNSTL >Mature_183_residues MFENKLFENKLYEGIYMKVVTFNGSPKKNGNTYEVIKAVAAELEKENIEVEIVHVGNKVMRGCMDCGGCSRNMNERCVMQ NDIQVEAWSPLMGGKLFDNEILKEIADNHNKSIAQIILRWDIQNGLRKKIINVVKLSAKGEFQEAINCTNDYINQIKQER KNANSILKQLEFMKNEFNTNSTL
Specific function: Reduces glyoxal and methylglyoxal. Is not involved in the vitamin B6 biosynthesis [H]
COG id: COG0655
COG function: function code R; Multimeric flavodoxin WrbA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR018170 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: =1.1.1.283 [H]
Molecular weight: Translated: 20997; Mature: 20997
Theoretical pI: Translated: 7.84; Mature: 7.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFENKLFENKLYEGIYMKVVTFNGSPKKNGNTYEVIKAVAAELEKENIEVEIVHVGNKVM CCCCHHHHHHHHCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHH RGCMDCGGCSRNMNERCVMQNDIQVEAWSPLMGGKLFDNEILKEIADNHNKSIAQIILRW HHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH DIQNGLRKKIINVVKLSAKGEFQEAINCTNDYINQIKQERKNANSILKQLEFMKNEFNTN HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC STL CCC >Mature Secondary Structure MFENKLFENKLYEGIYMKVVTFNGSPKKNGNTYEVIKAVAAELEKENIEVEIVHVGNKVM CCCCHHHHHHHHCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHH RGCMDCGGCSRNMNERCVMQNDIQVEAWSPLMGGKLFDNEILKEIADNHNKSIAQIILRW HHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH DIQNGLRKKIINVVKLSAKGEFQEAINCTNDYINQIKQERKNANSILKQLEFMKNEFNTN HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC STL CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9639930; 9384377 [H]