| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is ylaK [H]
Identifier: 170756515
GI number: 170756515
Start: 597891
End: 599267
Strand: Direct
Name: ylaK [H]
Synonym: CLD_0265
Alternate gene names: 170756515
Gene position: 597891-599267 (Clockwise)
Preceding gene: 170755351
Following gene: 170754733
Centisome position: 15.1
GC content: 31.01
Gene sequence:
>1377_bases TTGAAACTAACTTATGTATTAGATACTAATGTTATTTTGTATTCACCAGGAGCTATATTTTCTTTTGCAGATAATGATGT AGTTATACCTGAAGTAGTTTTAGAAGAATTAGATAGCTTTAAAAAGAATAATAATGATTTAGGGGCTAATGCTAGGCATG CAGCAAGAATAATAGATAAATTAAGAAAAGATGGAAGTTTAATAGATGGCATAGTATTACCTGGTGGAGGAACTTTAAGG GTAGAAATGAATCATTATGATGTAAAATTGCCTCCGTCTTGGGATAAGAATAAGCCGGATAACAGAATAATACAGGTTTG TAAGGGATTAAAAGAAAAAGGGGAAGAAGTAGTATTAATTACAAAGGATACCTTTGAGAGGATAAAGGCGGATACTATTA ATATAGATGTAGAAGATTTTTATGAAAAAGTAGTACCAGAATATGAAAGCCAATATAAAGGAAGATGTGATGCTTTTGCA TCTCACAGTACTTTAGAAAGTTTTTATAAGAATAGATATATGGATGTAGAGAGCTTATTTTTTTATTCAGAAGAGAAAAA TGATTACTATAAAGCAGATATTAATATAAATGAATTTATATTAATTAAATCTATGGAAAATCCAAAACAAACAGCTCTGG GAAGATATAATGGAGAAAAAGTTGTTCCTCTTTTTTATAAAGACGTCAAGCCTTTAGGAATAAGTCCTAGAAACATAGGA CAAAAGTTTATGTTAGAAGCTTTTTTAACAGATTCTAAAAATGCACCTTTAGTTATAGTAAAGGGACCTGCAGGTACAGC CAAAACTTTATTTTCTCTAGCTACAGGACTTCATAAAGTTATGGAAGAGGGAGAAGATGGATATAGAAAAATTTTAATCT GTAGACCTAATGTAACTATGGATGAAGATATAGGGTTTTTACCTGGAACAGAGGAAGAAAAAATAATGCCTTTTATGAGA CCTATTTTTGATAATTTAGAGATTTTAGTGGATTCTGATGAAAAGGAAAGATATAAAAATGAAAAAGAATTATATGATAA GATAAAAGAGTTATTTGATAGGCGAATTATAACTACAGAAGCGGTAGCTTATTTGAGAGGTAGATCTATAGTGAAAAATT GGGTTATAATAGATGAAGCTCAAAATTTAACACCAAAGCAAGTGAAGGCGGTTATAACTAGAGTAGGACAAGGAACGAAA CTTATATTAGTAGGTGATCCGGACCAAATAGACCAACCGTTTTTAGACTCTAGATCAAATGGTTTATGTTATGCATCAGA AAAAATGAGGGGAAGCAAACTTTGTTATCAGGTAACATTAAAGGATCATGAATGTGAAAGATCACCATTAGCCTATGAGG GAGCGAAGCGATTATAA
Upstream 100 bases:
>100_bases TATTAAAAGTCTATAAATATTTTTAATTTAATAAAATAGAGAATTTAATAAAGTTATAACTTTATCTGAATATAATAATA TAAAGAAGGGAGGAGTAGAC
Downstream 100 bases:
>100_bases TTTTATACTATATGTAAGTAGAGGGTGCCTCAAAATCAAATATATTTTGAGGTGCCCTCTATATTTTATGTGATATAATT TATTACAATCAGATTTATGT
Product: PhoH family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 458; Mature: 458
Protein sequence:
>458_residues MKLTYVLDTNVILYSPGAIFSFADNDVVIPEVVLEELDSFKKNNNDLGANARHAARIIDKLRKDGSLIDGIVLPGGGTLR VEMNHYDVKLPPSWDKNKPDNRIIQVCKGLKEKGEEVVLITKDTFERIKADTINIDVEDFYEKVVPEYESQYKGRCDAFA SHSTLESFYKNRYMDVESLFFYSEEKNDYYKADININEFILIKSMENPKQTALGRYNGEKVVPLFYKDVKPLGISPRNIG QKFMLEAFLTDSKNAPLVIVKGPAGTAKTLFSLATGLHKVMEEGEDGYRKILICRPNVTMDEDIGFLPGTEEEKIMPFMR PIFDNLEILVDSDEKERYKNEKELYDKIKELFDRRIITTEAVAYLRGRSIVKNWVIIDEAQNLTPKQVKAVITRVGQGTK LILVGDPDQIDQPFLDSRSNGLCYASEKMRGSKLCYQVTLKDHECERSPLAYEGAKRL
Sequences:
>Translated_458_residues MKLTYVLDTNVILYSPGAIFSFADNDVVIPEVVLEELDSFKKNNNDLGANARHAARIIDKLRKDGSLIDGIVLPGGGTLR VEMNHYDVKLPPSWDKNKPDNRIIQVCKGLKEKGEEVVLITKDTFERIKADTINIDVEDFYEKVVPEYESQYKGRCDAFA SHSTLESFYKNRYMDVESLFFYSEEKNDYYKADININEFILIKSMENPKQTALGRYNGEKVVPLFYKDVKPLGISPRNIG QKFMLEAFLTDSKNAPLVIVKGPAGTAKTLFSLATGLHKVMEEGEDGYRKILICRPNVTMDEDIGFLPGTEEEKIMPFMR PIFDNLEILVDSDEKERYKNEKELYDKIKELFDRRIITTEAVAYLRGRSIVKNWVIIDEAQNLTPKQVKAVITRVGQGTK LILVGDPDQIDQPFLDSRSNGLCYASEKMRGSKLCYQVTLKDHECERSPLAYEGAKRL >Mature_458_residues MKLTYVLDTNVILYSPGAIFSFADNDVVIPEVVLEELDSFKKNNNDLGANARHAARIIDKLRKDGSLIDGIVLPGGGTLR VEMNHYDVKLPPSWDKNKPDNRIIQVCKGLKEKGEEVVLITKDTFERIKADTINIDVEDFYEKVVPEYESQYKGRCDAFA SHSTLESFYKNRYMDVESLFFYSEEKNDYYKADININEFILIKSMENPKQTALGRYNGEKVVPLFYKDVKPLGISPRNIG QKFMLEAFLTDSKNAPLVIVKGPAGTAKTLFSLATGLHKVMEEGEDGYRKILICRPNVTMDEDIGFLPGTEEEKIMPFMR PIFDNLEILVDSDEKERYKNEKELYDKIKELFDRRIITTEAVAYLRGRSIVKNWVIIDEAQNLTPKQVKAVITRVGQGTK LILVGDPDQIDQPFLDSRSNGLCYASEKMRGSKLCYQVTLKDHECERSPLAYEGAKRL
Specific function: Unknown
COG id: COG1875
COG function: function code T; Predicted ATPase related to phosphate starvation-inducible protein PhoH
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PINc domain [H]
Homologues:
Organism=Escherichia coli, GI145693103, Length=166, Percent_Identity=34.9397590361446, Blast_Score=101, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 - InterPro: IPR006596 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 52236; Mature: 52236
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLTYVLDTNVILYSPGAIFSFADNDVVIPEVVLEELDSFKKNNNDLGANARHAARIIDK CEEEEEEECCEEEECCCCEEEECCCCEECHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH LRKDGSLIDGIVLPGGGTLRVEMNHYDVKLPPSWDKNKPDNRIIQVCKGLKEKGEEVVLI HHCCCCEECEEEECCCCEEEEEECCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEE TKDTFERIKADTINIDVEDFYEKVVPEYESQYKGRCDAFASHSTLESFYKNRYMDVESLF ECCHHHHHCCCEEEEEHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHE FYSEEKNDYYKADININEFILIKSMENPKQTALGRYNGEKVVPLFYKDVKPLGISPRNIG EEECCCCCEEEEECCCCEEEEEECCCCCHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHH QKFMLEAFLTDSKNAPLVIVKGPAGTAKTLFSLATGLHKVMEEGEDGYRKILICRPNVTM HHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCC DEDIGFLPGTEEEKIMPFMRPIFDNLEILVDSDEKERYKNEKELYDKIKELFDRRIITTE CCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCHHHHHCCHHHHHHHHHHHHHCCHHHHH AVAYLRGRSIVKNWVIIDEAQNLTPKQVKAVITRVGQGTKLILVGDPDQIDQPFLDSRSN HHHHHHCCHHHHCEEEEECCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHCCCCC GLCYASEKMRGSKLCYQVTLKDHECERSPLAYEGAKRL CEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKLTYVLDTNVILYSPGAIFSFADNDVVIPEVVLEELDSFKKNNNDLGANARHAARIIDK CEEEEEEECCEEEECCCCEEEECCCCEECHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH LRKDGSLIDGIVLPGGGTLRVEMNHYDVKLPPSWDKNKPDNRIIQVCKGLKEKGEEVVLI HHCCCCEECEEEECCCCEEEEEECCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEE TKDTFERIKADTINIDVEDFYEKVVPEYESQYKGRCDAFASHSTLESFYKNRYMDVESLF ECCHHHHHCCCEEEEEHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHE FYSEEKNDYYKADININEFILIKSMENPKQTALGRYNGEKVVPLFYKDVKPLGISPRNIG EEECCCCCEEEEECCCCEEEEEECCCCCHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHH QKFMLEAFLTDSKNAPLVIVKGPAGTAKTLFSLATGLHKVMEEGEDGYRKILICRPNVTM HHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCC DEDIGFLPGTEEEKIMPFMRPIFDNLEILVDSDEKERYKNEKELYDKIKELFDRRIITTE CCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCHHHHHCCHHHHHHHHHHHHHCCHHHHH AVAYLRGRSIVKNWVIIDEAQNLTPKQVKAVITRVGQGTKLILVGDPDQIDQPFLDSRSN HHHHHHCCHHHHCEEEEECCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHCCCCC GLCYASEKMRGSKLCYQVTLKDHECERSPLAYEGAKRL CEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]