| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756495
Identifier: 170756495
GI number: 170756495
Start: 705412
End: 706161
Strand: Direct
Name: 170756495
Synonym: CLD_0169
Alternate gene names: NA
Gene position: 705412-706161 (Clockwise)
Preceding gene: 170756218
Following gene: 170757481
Centisome position: 17.82
GC content: 26.4
Gene sequence:
>750_bases ATGAATAAAATCGTTATAGGATTTGCTCTGATTATTATAGCCACTTTAACATTAACATCATGTTCTAAGAAGAATAAGAT AAAATTTGACGATGAAATAGCCCCATATACCAAAAAAGAAACTAATGAGTTTAGTTATAAAATCAATAGTGACACAGTAA GAATAAAAAGCAATTGTGGAAATCTAAAGATTAAAAAAGGTAATGTTGATGAAGTTAAAGTTACCATAGAAAAACTTGTT GGTGGAAAAAGTGAGGATAAATTACAAGAAGCATTAAATTCTATTAGTTGCACTTTAGAGGATGGGACTATTAACATAAG TTTATCTAGTAAAGACAAGTCTAACGTCAGTTCTATAAATATAGAGACCACTATAGTTATCCCTAAAAAGATTAGCTCAT TAAATATACAAAATAATATTGGAAATATTGAGTTAGAAGGTAATTATAAAGATTTGAAGGTTCAAATGGAAAATGGAAAT ATATCATACAAAGGAGAGTTAGAGAAATCTAATATAAGTTCTAAAGTAGGAAATATTAATTTAAATTTACAACAATTAGA AAATAATTATCAGTACGAAATTAATGGAGAAGTTGTAAATGTAAATATTAAAGTACCAAACAAAAGTAAAATTAACCTAA TAGGTTCTATGGCTAATAAAGTTAAAGTTAAAGATGGAGGAAATATTAGTGAAGCTGGTGCGGTATTTGATATAAATGTA AAAACAGGCAATGCAAAGATAGAAAACTAA
Upstream 100 bases:
>100_bases AGCTTATTTATACAATATATAAAGTTTAATTATTTTCTTAAAGCTTTACCTTAAGCTGAAACTCTATTTTTATAGCTTAG GTTATGGAAAGGAGAAAAAA
Downstream 100 bases:
>100_bases AAGAAGATAAGGGGGAGCGCTTATGGACTTTATAGTTAGGGAAGCAAAATTATCTGATTTAGATAATATACTGGAACTAT GGAGAGAGTTATCTGTAGAT
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MNKIVIGFALIIIATLTLTSCSKKNKIKFDDEIAPYTKKETNEFSYKINSDTVRIKSNCGNLKIKKGNVDEVKVTIEKLV GGKSEDKLQEALNSISCTLEDGTINISLSSKDKSNVSSINIETTIVIPKKISSLNIQNNIGNIELEGNYKDLKVQMENGN ISYKGELEKSNISSKVGNINLNLQQLENNYQYEINGEVVNVNIKVPNKSKINLIGSMANKVKVKDGGNISEAGAVFDINV KTGNAKIEN
Sequences:
>Translated_249_residues MNKIVIGFALIIIATLTLTSCSKKNKIKFDDEIAPYTKKETNEFSYKINSDTVRIKSNCGNLKIKKGNVDEVKVTIEKLV GGKSEDKLQEALNSISCTLEDGTINISLSSKDKSNVSSINIETTIVIPKKISSLNIQNNIGNIELEGNYKDLKVQMENGN ISYKGELEKSNISSKVGNINLNLQQLENNYQYEINGEVVNVNIKVPNKSKINLIGSMANKVKVKDGGNISEAGAVFDINV KTGNAKIEN >Mature_249_residues MNKIVIGFALIIIATLTLTSCSKKNKIKFDDEIAPYTKKETNEFSYKINSDTVRIKSNCGNLKIKKGNVDEVKVTIEKLV GGKSEDKLQEALNSISCTLEDGTINISLSSKDKSNVSSINIETTIVIPKKISSLNIQNNIGNIELEGNYKDLKVQMENGN ISYKGELEKSNISSKVGNINLNLQQLENNYQYEINGEVVNVNIKVPNKSKINLIGSMANKVKVKDGGNISEAGAVFDINV KTGNAKIEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27303; Mature: 27303
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKIVIGFALIIIATLTLTSCSKKNKIKFDDEIAPYTKKETNEFSYKINSDTVRIKSNCG CCEEEHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCEEEEECCCC NLKIKKGNVDEVKVTIEKLVGGKSEDKLQEALNSISCTLEDGTINISLSSKDKSNVSSIN EEEEECCCCCCEEEEEEHHHCCCCHHHHHHHHHHEEEEEECCEEEEEECCCCCCCCEEEE IETTIVIPKKISSLNIQNNIGNIELEGNYKDLKVQMENGNISYKGELEKSNISSKVGNIN EEEEEEEECCCCEEEEECCCCEEEEECCCEEEEEEECCCCEEEECCCCCCCCCCCCCEEE LNLQQLENNYQYEINGEVVNVNIKVPNKSKINLIGSMANKVKVKDGGNISEAGAVFDINV EEEEECCCCCEEEECCEEEEEEEECCCCCEEEEEEECCCEEEEECCCCCCCCCEEEEEEE KTGNAKIEN ECCCCEECC >Mature Secondary Structure MNKIVIGFALIIIATLTLTSCSKKNKIKFDDEIAPYTKKETNEFSYKINSDTVRIKSNCG CCEEEHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCEEEEECCCC NLKIKKGNVDEVKVTIEKLVGGKSEDKLQEALNSISCTLEDGTINISLSSKDKSNVSSIN EEEEECCCCCCEEEEEEHHHCCCCHHHHHHHHHHEEEEEECCEEEEEECCCCCCCCEEEE IETTIVIPKKISSLNIQNNIGNIELEGNYKDLKVQMENGNISYKGELEKSNISSKVGNIN EEEEEEEECCCCEEEEECCCCEEEEECCCEEEEEEECCCCEEEECCCCCCCCCCCCCEEE LNLQQLENNYQYEINGEVVNVNIKVPNKSKINLIGSMANKVKVKDGGNISEAGAVFDINV EEEEECCCCCEEEECCEEEEEEEECCCCCEEEEEEECCCEEEEECCCCCCCCCEEEEEEE KTGNAKIEN ECCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA