| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756493
Identifier: 170756493
GI number: 170756493
Start: 2861838
End: 2863007
Strand: Reverse
Name: 170756493
Synonym: CLD_1883
Alternate gene names: NA
Gene position: 2863007-2861838 (Counterclockwise)
Preceding gene: 170755333
Following gene: 170757847
Centisome position: 72.33
GC content: 20.85
Gene sequence:
>1170_bases ATGAACAAGTTAAAAAATTTAGACTTTAATATGTTAGTTTTATACGTATTATTAACATTTTTTGTTATCCCTAGGGACTT ACAGCAGGAATTTAGTGTTGTTTTCATTATAGGATTCTTTTTAATAAATATTATTTATGTTTCTATAAATGATATTGAAA TAAAAATTAAGAAAATAGATATATTATTGTATTCTTTAAGTGGTGTTATATGTATAGTTATCCTAATAATAAGCCCTTAT ACTACTGTATTTACTATTAGTACTTTCGTCTTTTTAATAATTGCACATATGGGCATTAGTAAAAAACATTATATATCAAA ACAATACTTAAATAGGATAATATATATAACGTGTTTGATATCCATAATTATACAGTTGATATTAGGTAGATATAATACTA TAAATGGAAAGATATCTTTAAGTATAATTGGAGATAAGAATTTTTCAGGTGTTGTTATTATTTTGTTTTTTATGTATTGT TCCAAAAATAAATTTTTATTAGGAGAGATATTATCTGTTTTTTTTATTTTAATTTTAGATAGTAGAGCTAGTTTACTTAC ATTAGTATTATTTTTGGTAGTTAAGTTATTTAAAAATACAATATATGTATTATTACAAAGATTTAGGTTAAATAAAATAT ATAAATTATTTATTTTAATGTTTATTATAACTGTATCCATTAGTTATATATGGGTTTACAAAGTAGCTATAGATGGAGTT AAAGAATATCAACAGGGATTAAATGATACTTCTAATAAAATGAGGTTTGTTGCTAATATATATGCTATAGATTTGATTAA AAATAATAAAGAAGAATTAATATTTTATGGATATGATAATGATTTTAAAGATATTTTTAGTATATATGATTATGAAATAG ATTTACATAGAAGGTTTATGGGAGTCAGGCTTGTTCAGCCTCACAATTCCATTTTAAATATAAATATAAGATCTGGAATT ATATTTTCTCTATTATATTTTTATATATTATCAAGAATTATAGATAAATTATATACAAAAGATAATTTAGAATACATACT TCCTTATTTATTTAGTACGTTATTTTTGCATGAGTTATTAAATAGGAAGTTTTTAGTGTTCTGGCTTATATTATTGTGTC TACCTTCAAATAAAGTGTTTTTCACTAAGAAATATAAAATAAAGATGTAG
Upstream 100 bases:
>100_bases TGTGGATGCGAAAGAAACTTTTAATATAGATGAGAATTTTTTAAAGAAATGTAAAGTGAAAGAATAATGATATGTCTATT TGGTAACATTAGGAGGAAAA
Downstream 100 bases:
>100_bases AATGAGGTGAAAAAATGTATAACGATAAAAAAATAGCTGTGTGCATTCCAGCAAGAGGAGGATCCAAAGGTATTCCAAGA AAAAACGTAAGATTACTAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 389; Mature: 389
Protein sequence:
>389_residues MNKLKNLDFNMLVLYVLLTFFVIPRDLQQEFSVVFIIGFFLINIIYVSINDIEIKIKKIDILLYSLSGVICIVILIISPY TTVFTISTFVFLIIAHMGISKKHYISKQYLNRIIYITCLISIIIQLILGRYNTINGKISLSIIGDKNFSGVVIILFFMYC SKNKFLLGEILSVFFILILDSRASLLTLVLFLVVKLFKNTIYVLLQRFRLNKIYKLFILMFIITVSISYIWVYKVAIDGV KEYQQGLNDTSNKMRFVANIYAIDLIKNNKEELIFYGYDNDFKDIFSIYDYEIDLHRRFMGVRLVQPHNSILNINIRSGI IFSLLYFYILSRIIDKLYTKDNLEYILPYLFSTLFLHELLNRKFLVFWLILLCLPSNKVFFTKKYKIKM
Sequences:
>Translated_389_residues MNKLKNLDFNMLVLYVLLTFFVIPRDLQQEFSVVFIIGFFLINIIYVSINDIEIKIKKIDILLYSLSGVICIVILIISPY TTVFTISTFVFLIIAHMGISKKHYISKQYLNRIIYITCLISIIIQLILGRYNTINGKISLSIIGDKNFSGVVIILFFMYC SKNKFLLGEILSVFFILILDSRASLLTLVLFLVVKLFKNTIYVLLQRFRLNKIYKLFILMFIITVSISYIWVYKVAIDGV KEYQQGLNDTSNKMRFVANIYAIDLIKNNKEELIFYGYDNDFKDIFSIYDYEIDLHRRFMGVRLVQPHNSILNINIRSGI IFSLLYFYILSRIIDKLYTKDNLEYILPYLFSTLFLHELLNRKFLVFWLILLCLPSNKVFFTKKYKIKM >Mature_389_residues MNKLKNLDFNMLVLYVLLTFFVIPRDLQQEFSVVFIIGFFLINIIYVSINDIEIKIKKIDILLYSLSGVICIVILIISPY TTVFTISTFVFLIIAHMGISKKHYISKQYLNRIIYITCLISIIIQLILGRYNTINGKISLSIIGDKNFSGVVIILFFMYC SKNKFLLGEILSVFFILILDSRASLLTLVLFLVVKLFKNTIYVLLQRFRLNKIYKLFILMFIITVSISYIWVYKVAIDGV KEYQQGLNDTSNKMRFVANIYAIDLIKNNKEELIFYGYDNDFKDIFSIYDYEIDLHRRFMGVRLVQPHNSILNINIRSGI IFSLLYFYILSRIIDKLYTKDNLEYILPYLFSTLFLHELLNRKFLVFWLILLCLPSNKVFFTKKYKIKM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45910; Mature: 45910
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLKNLDFNMLVLYVLLTFFVIPRDLQQEFSVVFIIGFFLINIIYVSINDIEIKIKKID CCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEEECEEEEEEEHH ILLYSLSGVICIVILIISPYTTVFTISTFVFLIIAHMGISKKHYISKQYLNRIIYITCLI HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH SIIIQLILGRYNTINGKISLSIIGDKNFSGVVIILFFMYCSKNKFLLGEILSVFFILILD HHHHHHHHCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC SRASLLTLVLFLVVKLFKNTIYVLLQRFRLNKIYKLFILMFIITVSISYIWVYKVAIDGV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KEYQQGLNDTSNKMRFVANIYAIDLIKNNKEELIFYGYDNDFKDIFSIYDYEIDLHRRFM HHHHHCCCCCCHHHHHHHHHHEEEEEECCCCCEEEEECCCCHHHHHHHHCCCHHHHHHHH GVRLVQPHNSILNINIRSGIIFSLLYFYILSRIIDKLYTKDNLEYILPYLFSTLFLHELL CEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH NRKFLVFWLILLCLPSNKVFFTKKYKIKM CCHHHHHHHHHHHCCCCCEEEEEEEEECC >Mature Secondary Structure MNKLKNLDFNMLVLYVLLTFFVIPRDLQQEFSVVFIIGFFLINIIYVSINDIEIKIKKID CCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEEECEEEEEEEHH ILLYSLSGVICIVILIISPYTTVFTISTFVFLIIAHMGISKKHYISKQYLNRIIYITCLI HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH SIIIQLILGRYNTINGKISLSIIGDKNFSGVVIILFFMYCSKNKFLLGEILSVFFILILD HHHHHHHHCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC SRASLLTLVLFLVVKLFKNTIYVLLQRFRLNKIYKLFILMFIITVSISYIWVYKVAIDGV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KEYQQGLNDTSNKMRFVANIYAIDLIKNNKEELIFYGYDNDFKDIFSIYDYEIDLHRRFM HHHHHCCCCCCHHHHHHHHHHEEEEEECCCCCEEEEECCCCHHHHHHHHCCCHHHHHHHH GVRLVQPHNSILNINIRSGIIFSLLYFYILSRIIDKLYTKDNLEYILPYLFSTLFLHELL CEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH NRKFLVFWLILLCLPSNKVFFTKKYKIKM CCHHHHHHHHHHHCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA