| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755333
Identifier: 170755333
GI number: 170755333
Start: 2863041
End: 2863994
Strand: Reverse
Name: 170755333
Synonym: CLD_1882
Alternate gene names: NA
Gene position: 2863994-2863041 (Counterclockwise)
Preceding gene: 170756264
Following gene: 170756493
Centisome position: 72.36
GC content: 24.21
Gene sequence:
>954_bases ATGAATTTTTATGTATGTGCCACGCCTTATCATTTATTTATTACATTATGTGATATAGCTAATAGTAATATAAAAAGCTA TATATATTTATCTACACATGATGATAATATTTTTAAATTATTTTTAAAATATAAAGAAAAACTTATTGCTCTTAAGAATA TAGAAAGAGTTTGGGTGAGAAAACGAAGTAATCTTCATGAGAGACTATTTATAGAAAGCATTAAGGATAAACTAGAATAT AAGAGTTTAAAAAAAGAAATAATCAATTCTAATGTTATTATATTTCCATGGAATCCATACTCTTTATTTTCACCATCAGA ATATATATTTAAGTATGCTAAAAAAGTGAAGTTAATAGAAGAAGGGGCTAATCTCTATATAATGAAGAAACCTTCTAAAG CATTTATGTTAGTAAAAAGATATATATACAGAAGAAATTTAAATTTTTACAAAGATGAAAAAATTACAGAAGTTATGGTC CAATTTCCAGAAAAATATCCAAAGCATTTAAAGGATAAATTAGCATACTTAGACTTAAATGGTATGGTTACTAAAGTGGA TGCTATTAGTAAAAATAATATAGTTAATGTTTTTTTAGATAAATTAAATAGGTATGATTTTAAAAATAAAAGTTTATTAA TCTTATCTCAGCCATTATCAGAGGATGGCTATATAACGGAAGAGAAAAAGATAAAGCTTTATAAGAATATAATAAATGAA TATGGACAGGGCTGTAATATTGTATTAAAAAAACATCCTAGAGAGAAAACAATATATAATTTTCCTAATGTATTAGAATT AGGCGGGAATTTCCCTAGTGAACTATTTAAATTGCTAGATATAAAGTTTGAAAAAGCCATAGGTGTTTGTACTGGTTCAG TTAAATTTGTGGATGCGAAAGAAACTTTTAATATAGATGAGAATTTTTTAAAGAAATGTAAAGTGAAAGAATAA
Upstream 100 bases:
>100_bases ATGTAATAAATATAGAAAATATTAATTGGCCATCAAAAATACGAGGTTTTATTAAAAGAAAATTTAGAAATTAGAAATTA TATAAAGGATATGATGATAA
Downstream 100 bases:
>100_bases TGATATGTCTATTTGGTAACATTAGGAGGAAAAATGAACAAGTTAAAAAATTTAGACTTTAATATGTTAGTTTTATACGT ATTATTAACATTTTTTGTTA
Product: exopolysaccharide biosynthesis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MNFYVCATPYHLFITLCDIANSNIKSYIYLSTHDDNIFKLFLKYKEKLIALKNIERVWVRKRSNLHERLFIESIKDKLEY KSLKKEIINSNVIIFPWNPYSLFSPSEYIFKYAKKVKLIEEGANLYIMKKPSKAFMLVKRYIYRRNLNFYKDEKITEVMV QFPEKYPKHLKDKLAYLDLNGMVTKVDAISKNNIVNVFLDKLNRYDFKNKSLLILSQPLSEDGYITEEKKIKLYKNIINE YGQGCNIVLKKHPREKTIYNFPNVLELGGNFPSELFKLLDIKFEKAIGVCTGSVKFVDAKETFNIDENFLKKCKVKE
Sequences:
>Translated_317_residues MNFYVCATPYHLFITLCDIANSNIKSYIYLSTHDDNIFKLFLKYKEKLIALKNIERVWVRKRSNLHERLFIESIKDKLEY KSLKKEIINSNVIIFPWNPYSLFSPSEYIFKYAKKVKLIEEGANLYIMKKPSKAFMLVKRYIYRRNLNFYKDEKITEVMV QFPEKYPKHLKDKLAYLDLNGMVTKVDAISKNNIVNVFLDKLNRYDFKNKSLLILSQPLSEDGYITEEKKIKLYKNIINE YGQGCNIVLKKHPREKTIYNFPNVLELGGNFPSELFKLLDIKFEKAIGVCTGSVKFVDAKETFNIDENFLKKCKVKE >Mature_317_residues MNFYVCATPYHLFITLCDIANSNIKSYIYLSTHDDNIFKLFLKYKEKLIALKNIERVWVRKRSNLHERLFIESIKDKLEY KSLKKEIINSNVIIFPWNPYSLFSPSEYIFKYAKKVKLIEEGANLYIMKKPSKAFMLVKRYIYRRNLNFYKDEKITEVMV QFPEKYPKHLKDKLAYLDLNGMVTKVDAISKNNIVNVFLDKLNRYDFKNKSLLILSQPLSEDGYITEEKKIKLYKNIINE YGQGCNIVLKKHPREKTIYNFPNVLELGGNFPSELFKLLDIKFEKAIGVCTGSVKFVDAKETFNIDENFLKKCKVKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012477 [H]
Pfam domain/function: PF07922 Glyco_transf_52 [H]
EC number: NA
Molecular weight: Translated: 37527; Mature: 37527
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFYVCATPYHLFITLCDIANSNIKSYIYLSTHDDNIFKLFLKYKEKLIALKNIERVWVR CCEEEEECHHHEEHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH KRSNLHERLFIESIKDKLEYKSLKKEIINSNVIIFPWNPYSLFSPSEYIFKYAKKVKLIE HHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHH EGANLYIMKKPSKAFMLVKRYIYRRNLNFYKDEKITEVMVQFPEKYPKHLKDKLAYLDLN CCCCEEEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECC GMVTKVDAISKNNIVNVFLDKLNRYDFKNKSLLILSQPLSEDGYITEEKKIKLYKNIINE CCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHH YGQGCNIVLKKHPREKTIYNFPNVLELGGNFPSELFKLLDIKFEKAIGVCTGSVKFVDAK HCCCCEEEEECCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHEEEECCEEEEECH ETFNIDENFLKKCKVKE HCCCCCHHHHHHCCCCC >Mature Secondary Structure MNFYVCATPYHLFITLCDIANSNIKSYIYLSTHDDNIFKLFLKYKEKLIALKNIERVWVR CCEEEEECHHHEEHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH KRSNLHERLFIESIKDKLEYKSLKKEIINSNVIIFPWNPYSLFSPSEYIFKYAKKVKLIE HHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHH EGANLYIMKKPSKAFMLVKRYIYRRNLNFYKDEKITEVMVQFPEKYPKHLKDKLAYLDLN CCCCEEEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECC GMVTKVDAISKNNIVNVFLDKLNRYDFKNKSLLILSQPLSEDGYITEEKKIKLYKNIINE CCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHH YGQGCNIVLKKHPREKTIYNFPNVLELGGNFPSELFKLLDIKFEKAIGVCTGSVKFVDAK HCCCCEEEEECCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHEEEECCEEEEECH ETFNIDENFLKKCKVKE HCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]