| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is coaD
Identifier: 170756472
GI number: 170756472
Start: 2617727
End: 2618221
Strand: Reverse
Name: coaD
Synonym: CLD_2144
Alternate gene names: 170756472
Gene position: 2618221-2617727 (Counterclockwise)
Preceding gene: 170757382
Following gene: 170757282
Centisome position: 66.15
GC content: 29.29
Gene sequence:
>495_bases ATGAAAACTGCAGTGTACCCAGGAAGTTTTGACCCTATAACTAAGGGACATTTAAATATAATTAAAAGAGCTTCTAAGGT TTGTGATAAACTAATAGTAGCGGTACTTGTAAATCCAGAAAAGAAGGGACTTTTTTCAGTAGATGAGAGAGTAGAAATGA TAAAAAGAGTTACTAAGAACCATAGCAATATAGAAGTGCAATGTTTTAGTGGACTTTTGATAGATTTTATGAAAGAAAAG AAATCTAAGGTTATAATTAAAGGCCTTAGAACTATGTCAGATTTTGAATATGAATTTAAGATGGCTCTTATGAATAACAA ATTAGATCCTAATATAGAAACAGTATTTATGATGACCAATGCAAAATATTCTTATTTAAGTTCATCCTCAGTAAAGCAGG TAGCTATGTTTGGTGGATGTATAAAGGATTTGGTACCAGATGAAATAATACCAGATATTAAAAAAAAGATAAATCATAAA AAGGAATGTATTTAG
Upstream 100 bases:
>100_bases TCAGAAGAAATATATGAAGGAACTGAAAGAATAAAATTATTTGATCATAGAAAATATGGAAACACTACCGTTTGTTTTTA TAAATTTAAGGAGGATTAAA
Downstream 100 bases:
>100_bases GAGGGTTACTTAATGGATGTTATTAAGCTTTTAGCATATCTAGAAGAACTAATAGAATCAGGTTCAAGTATTCCTTTAAC GGGAAAAGTTACTATAAATA
Product: phosphopantetheine adenylyltransferase
Products: NA
Alternate protein names: Dephospho-CoA pyrophosphorylase; Pantetheine-phosphate adenylyltransferase; PPAT [H]
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MKTAVYPGSFDPITKGHLNIIKRASKVCDKLIVAVLVNPEKKGLFSVDERVEMIKRVTKNHSNIEVQCFSGLLIDFMKEK KSKVIIKGLRTMSDFEYEFKMALMNNKLDPNIETVFMMTNAKYSYLSSSSVKQVAMFGGCIKDLVPDEIIPDIKKKINHK KECI
Sequences:
>Translated_164_residues MKTAVYPGSFDPITKGHLNIIKRASKVCDKLIVAVLVNPEKKGLFSVDERVEMIKRVTKNHSNIEVQCFSGLLIDFMKEK KSKVIIKGLRTMSDFEYEFKMALMNNKLDPNIETVFMMTNAKYSYLSSSSVKQVAMFGGCIKDLVPDEIIPDIKKKINHK KECI >Mature_164_residues MKTAVYPGSFDPITKGHLNIIKRASKVCDKLIVAVLVNPEKKGLFSVDERVEMIKRVTKNHSNIEVQCFSGLLIDFMKEK KSKVIIKGLRTMSDFEYEFKMALMNNKLDPNIETVFMMTNAKYSYLSSSSVKQVAMFGGCIKDLVPDEIIPDIKKKINHK KECI
Specific function: Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate [H]
COG id: COG0669
COG function: function code H; Phosphopantetheine adenylyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial CoaD family [H]
Homologues:
Organism=Escherichia coli, GI1790065, Length=156, Percent_Identity=40.3846153846154, Blast_Score=150, Evalue=4e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR001980 - InterPro: IPR014729 [H]
Pfam domain/function: PF01467 CTP_transf_2 [H]
EC number: =2.7.7.3 [H]
Molecular weight: Translated: 18667; Mature: 18667
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTAVYPGSFDPITKGHLNIIKRASKVCDKLIVAVLVNPEKKGLFSVDERVEMIKRVTKN CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCC HSNIEVQCFSGLLIDFMKEKKSKVIIKGLRTMSDFEYEFKMALMNNKLDPNIETVFMMTN CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEC AKYSYLSSSSVKQVAMFGGCIKDLVPDEIIPDIKKKINHKKECI CCHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHCCC >Mature Secondary Structure MKTAVYPGSFDPITKGHLNIIKRASKVCDKLIVAVLVNPEKKGLFSVDERVEMIKRVTKN CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCC HSNIEVQCFSGLLIDFMKEKKSKVIIKGLRTMSDFEYEFKMALMNNKLDPNIETVFMMTN CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEC AKYSYLSSSSVKQVAMFGGCIKDLVPDEIIPDIKKKINHKKECI CCHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA