Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170756400

Identifier: 170756400

GI number: 170756400

Start: 2848075

End: 2848443

Strand: Reverse

Name: 170756400

Synonym: CLD_1896

Alternate gene names: NA

Gene position: 2848443-2848075 (Counterclockwise)

Preceding gene: 170757234

Following gene: 170754682

Centisome position: 71.96

GC content: 25.2

Gene sequence:

>369_bases
ATGAATGATTACATAGAAGTGATAAAAAAGTCTATAGAATTATCTAATGTTTTAAAGGAAGGGATAGATTATGTAAAGGA
AACTATAGTTTTTAGGGAATATGGAGAGTTAGACAGTCTTTTAGATGGTCTTGTAGATTCAGTAGCATATTTAGAAAAGG
CTTTAAAACCAGTTTTTTTAGAAATAAAGGATAATGAGTATGGGAAAAAAATAAAAGACTTTCAAAATAGCTTAAATATT
CTTAAAGATACTTTGGATAATGGAGATATGGATGATGCTATTAGTTTTATAGAGGATAACCTTTTTGTGAAGTATGAAAT
ATGGAAAAAACATTTAGATAGTAAATTAAAAAAATATACTTATTGTTAA

Upstream 100 bases:

>100_bases
TTTAGCAAGGACTTTGGTTTTAATTAAAGTTCTATAAACCTATGAGTAGCTAAAGCATTTGTGGTTATATAAAAAGAAAT
AATATTAAGGGAGAATTTAT

Downstream 100 bases:

>100_bases
TTTTTAAAATAAATATTAAAAATCTTATAAATGTTAAAGTAATATGGATTATTTACGATAGAAAAAATATGTGTATATAT
AGATTTAACCATTTTGGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MNDYIEVIKKSIELSNVLKEGIDYVKETIVFREYGELDSLLDGLVDSVAYLEKALKPVFLEIKDNEYGKKIKDFQNSLNI
LKDTLDNGDMDDAISFIEDNLFVKYEIWKKHLDSKLKKYTYC

Sequences:

>Translated_122_residues
MNDYIEVIKKSIELSNVLKEGIDYVKETIVFREYGELDSLLDGLVDSVAYLEKALKPVFLEIKDNEYGKKIKDFQNSLNI
LKDTLDNGDMDDAISFIEDNLFVKYEIWKKHLDSKLKKYTYC
>Mature_122_residues
MNDYIEVIKKSIELSNVLKEGIDYVKETIVFREYGELDSLLDGLVDSVAYLEKALKPVFLEIKDNEYGKKIKDFQNSLNI
LKDTLDNGDMDDAISFIEDNLFVKYEIWKKHLDSKLKKYTYC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14286; Mature: 14286

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDYIEVIKKSIELSNVLKEGIDYVKETIVFREYGELDSLLDGLVDSVAYLEKALKPVFL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
EIKDNEYGKKIKDFQNSLNILKDTLDNGDMDDAISFIEDNLFVKYEIWKKHLDSKLKKYT
EECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC
YC
CC
>Mature Secondary Structure
MNDYIEVIKKSIELSNVLKEGIDYVKETIVFREYGELDSLLDGLVDSVAYLEKALKPVFL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
EIKDNEYGKKIKDFQNSLNILKDTLDNGDMDDAISFIEDNLFVKYEIWKKHLDSKLKKYT
EECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC
YC
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA