| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is pduV [H]
Identifier: 170756365
GI number: 170756365
Start: 2249813
End: 2250259
Strand: Reverse
Name: pduV [H]
Synonym: CLD_2526
Alternate gene names: 170756365
Gene position: 2250259-2249813 (Counterclockwise)
Preceding gene: 170757861
Following gene: 170755289
Centisome position: 56.85
GC content: 33.56
Gene sequence:
>447_bases ATGAGAAAAAAGCGCATAATGGTAATTGGCCCTTCAAAATGCGGCAAAACTACAATAGTTAATGCATTAAACGATTATGA TGGTCCATTAAGGCGAACACCAGATTTAATTTATGGTAAGAATACCATTGATGTTCCAGGCTCCTATATAGAGAATGCAT GGATGTATAAACATATAATTGCAGCAGCTCAGGATGCATCTTGTGTGCTTATATTGGTTGACCAATCTAATTGCACTGAA ATATACTCCCATGGATTTGCAAAGTCTTTTAGATGTCCAGTAATTGGGGTTATAACAAAATGTGATTTGATGCCTAGAAA TAAAGAAAAATGTGAAATGCAGTTAAAAAAGATAGGGGTATCAGAGACATATTTTCATATTAGCTTTGAAATGGGAACAG GAATTGATGCTTTAAAAAAGTATTTATTTGAAAAAGGTGAGGAGTAA
Upstream 100 bases:
>100_bases TAATAAGTGGTGATGTTCAAAGTGTTGAAACAGCTCTTAGTGCAGTTAATGATACGCTAAAGGATATGCTTGGATTTACG ACCGCTCCCATTACAAGAAC
Downstream 100 bases:
>100_bases AGGTCAATGATGAAATTTATTACGGAAGAGTATTTAAGAGATTTATATAGAAAAGAACCTTTTAATACCTACAAGTTAGA ACAAGGACAGCGCCTTACCC
Product: EutP/PduV family GTP-binding protein
Products: ADP; 4-phospho-L-aspartate
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MRKKRIMVIGPSKCGKTTIVNALNDYDGPLRRTPDLIYGKNTIDVPGSYIENAWMYKHIIAAAQDASCVLILVDQSNCTE IYSHGFAKSFRCPVIGVITKCDLMPRNKEKCEMQLKKIGVSETYFHISFEMGTGIDALKKYLFEKGEE
Sequences:
>Translated_148_residues MRKKRIMVIGPSKCGKTTIVNALNDYDGPLRRTPDLIYGKNTIDVPGSYIENAWMYKHIIAAAQDASCVLILVDQSNCTE IYSHGFAKSFRCPVIGVITKCDLMPRNKEKCEMQLKKIGVSETYFHISFEMGTGIDALKKYLFEKGEE >Mature_148_residues MRKKRIMVIGPSKCGKTTIVNALNDYDGPLRRTPDLIYGKNTIDVPGSYIENAWMYKHIIAAAQDASCVLILVDQSNCTE IYSHGFAKSFRCPVIGVITKCDLMPRNKEKCEMQLKKIGVSETYFHISFEMGTGIDALKKYLFEKGEE
Specific function: Ethanolamine utilization. [C]
COG id: COG4917
COG function: function code E; Ethanolamine utilization protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the eutP/pduV family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012381 [H]
Pfam domain/function: PF10662 PduV-EutP [H]
EC number: 2.7.2.4
Molecular weight: Translated: 16705; Mature: 16705
Theoretical pI: Translated: 8.57; Mature: 8.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 8.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKKRIMVIGPSKCGKTTIVNALNDYDGPLRRTPDLIYGKNTIDVPGSYIENAWMYKHII CCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHH AAAQDASCVLILVDQSNCTEIYSHGFAKSFRCPVIGVITKCDLMPRNKEKCEMQLKKIGV HHCCCCCEEEEEEECCCHHHHHHCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCC SETYFHISFEMGTGIDALKKYLFEKGEE CCEEEEEEEECCCCHHHHHHHHHHCCCC >Mature Secondary Structure MRKKRIMVIGPSKCGKTTIVNALNDYDGPLRRTPDLIYGKNTIDVPGSYIENAWMYKHII CCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHH AAAQDASCVLILVDQSNCTEIYSHGFAKSFRCPVIGVITKCDLMPRNKEKCEMQLKKIGV HHCCCCCEEEEEEECCCHHHHHHCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCC SETYFHISFEMGTGIDALKKYLFEKGEE CCEEEEEEEECCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-aspartate
Specific reaction: ATP + L-aspartate = ADP + 4-phospho-L-aspartate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10498708; 11677609 [H]