| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755289
Identifier: 170755289
GI number: 170755289
Start: 2249078
End: 2249806
Strand: Reverse
Name: 170755289
Synonym: CLD_2527
Alternate gene names: NA
Gene position: 2249806-2249078 (Counterclockwise)
Preceding gene: 170756365
Following gene: 170757198
Centisome position: 56.84
GC content: 29.63
Gene sequence:
>729_bases ATGATGAAATTTATTACGGAAGAGTATTTAAGAGATTTATATAGAAAAGAACCTTTTAATACCTACAAGTTAGAACAAGG ACAGCGCCTTACCCCTGGAGCAACTGAGTATTTATCTGATAAAGGAATAGAATTGAGTGATGATTCAAAAGTAAATAAGT CTTCAAAAGTAAATGCGAATATTTCCCCAAAAAACTCAGCAAAAACACCGGAAGAAACATCTAAAGAAACAATAAAAGAT GTGGGAAATAGTGATGTAAAATTCAATTTGAATAAGAAGCTTTGCTTAAAATTGAAATCCATGGAGGCTAAATTTCTTGT TGTTAGTAGTGAAATATTAAAAGAAGATATTATTTTAGCACAGAATATTATAAATTTAGGTAGGAAAATATCAAACATCA GAAATGTTGTGGATGGGAAAGGTACTCTTGAACCTATATATTTAAAAGAATGTACCGGGATGAATTCATCAAATTCTGAA GCGGTTCTTGATGATTGTTTTGAAATAACAGAATTTCATATGCAGCTTCCAAAAAGCAATGCAATTTTAAAAATGAACGT ACTTCGTTGTGCGGTGCAGGAATTACAGTTTGAAATAATTGATACATATAAAAGTGATGATGAAAGTTTAAAAAGCAAAA TTATGGACAATGTTAATTTAATAATTAATTCACTGTCCCAATTAATTTGTTTAGCAGTAGGAGGAAAAGAATGTCAGAGG AAAAATTAA
Upstream 100 bases:
>100_bases AGGGGTATCAGAGACATATTTTCATATTAGCTTTGAAATGGGAACAGGAATTGATGCTTTAAAAAAGTATTTATTTGAAA AAGGTGAGGAGTAAAGGTCA
Downstream 100 bases:
>100_bases CTTTTGAATATTGTGATAATATGGTTCGAAAGTTTGAAGAAGTTATAGAAAAACCAATTGTTAATGGGTCTTCTGTTTAT TACACAGGTGTGGATCTAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MMKFITEEYLRDLYRKEPFNTYKLEQGQRLTPGATEYLSDKGIELSDDSKVNKSSKVNANISPKNSAKTPEETSKETIKD VGNSDVKFNLNKKLCLKLKSMEAKFLVVSSEILKEDIILAQNIINLGRKISNIRNVVDGKGTLEPIYLKECTGMNSSNSE AVLDDCFEITEFHMQLPKSNAILKMNVLRCAVQELQFEIIDTYKSDDESLKSKIMDNVNLIINSLSQLICLAVGGKECQR KN
Sequences:
>Translated_242_residues MMKFITEEYLRDLYRKEPFNTYKLEQGQRLTPGATEYLSDKGIELSDDSKVNKSSKVNANISPKNSAKTPEETSKETIKD VGNSDVKFNLNKKLCLKLKSMEAKFLVVSSEILKEDIILAQNIINLGRKISNIRNVVDGKGTLEPIYLKECTGMNSSNSE AVLDDCFEITEFHMQLPKSNAILKMNVLRCAVQELQFEIIDTYKSDDESLKSKIMDNVNLIINSLSQLICLAVGGKECQR KN >Mature_242_residues MMKFITEEYLRDLYRKEPFNTYKLEQGQRLTPGATEYLSDKGIELSDDSKVNKSSKVNANISPKNSAKTPEETSKETIKD VGNSDVKFNLNKKLCLKLKSMEAKFLVVSSEILKEDIILAQNIINLGRKISNIRNVVDGKGTLEPIYLKECTGMNSSNSE AVLDDCFEITEFHMQLPKSNAILKMNVLRCAVQELQFEIIDTYKSDDESLKSKIMDNVNLIINSLSQLICLAVGGKECQR KN
Specific function: Unknown
COG id: COG4812
COG function: function code E; Ethanolamine utilization cobalamin adenosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27329; Mature: 27329
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKFITEEYLRDLYRKEPFNTYKLEQGQRLTPGATEYLSDKGIELSDDSKVNKSSKVNAN CCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCC ISPKNSAKTPEETSKETIKDVGNSDVKFNLNKKLCLKLKSMEAKFLVVSSEILKEDIILA CCCCCCCCCCHHHHHHHHHHCCCCCEEEECCHHHHHHHHHCCCEEEEHHHHHHHHHHHHH QNIINLGRKISNIRNVVDGKGTLEPIYLKECTGMNSSNSEAVLDDCFEITEFHMQLPKSN HHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCC AILKMNVLRCAVQELQFEIIDTYKSDDESLKSKIMDNVNLIINSLSQLICLAVGGKECQR CEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCC KN CC >Mature Secondary Structure MMKFITEEYLRDLYRKEPFNTYKLEQGQRLTPGATEYLSDKGIELSDDSKVNKSSKVNAN CCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCC ISPKNSAKTPEETSKETIKDVGNSDVKFNLNKKLCLKLKSMEAKFLVVSSEILKEDIILA CCCCCCCCCCHHHHHHHHHHCCCCCEEEECCHHHHHHHHHCCCEEEEHHHHHHHHHHHHH QNIINLGRKISNIRNVVDGKGTLEPIYLKECTGMNSSNSEAVLDDCFEITEFHMQLPKSN HHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCC AILKMNVLRCAVQELQFEIIDTYKSDDESLKSKIMDNVNLIINSLSQLICLAVGGKECQR CEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCC KN CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA