Click here to switch to the map view.

The map label for this gene is sufB [C]

Identifier: 170756295

GI number: 170756295

Start: 3038488

End: 3039408

Strand: Reverse

Name: sufB [C]

Synonym: CLD_1731

Alternate gene names: 170756295

Gene position: 3039408-3038488 (Counterclockwise)

Preceding gene: 170757806

Following gene: 170756331

Centisome position: 76.79

GC content: 32.14

Gene sequence:

>921_bases
ATGATGAATGCAATACATAGAAATTTATTAAAAGAAGTAATAGGATTTCACGAAATTCCCATAGGGGCTTATAATATTAG
AACAAATGGAAAAGCAGTTGGAAGAAATACAACTGAGAATATAGATATTGTTATCAAAACAGATAAACCGGGAATTGATA
TCATTATTAAACCTAATACAATGAATGAGAGTGTGCATATACCTGTTTTATTAAGTGAGAGTGGTTTTAAAGAAATGATA
TATAATGATTTTTATGTTGGAGAAAATTCCGATGTAACTATTATTGCCGGTTGTGGAATTCATAATGGTGGGAGTGAGGC
ATCTGAACATAACGGTACCCATAGTTTTTTTATTGGTAAAAATGCGAAAGTAAAATATGTAGAAAAGCACTATGGAACTG
GTGATGGTAATGGAGAACGTATTATGAATCCTACAACAATTATAAAAATTGATAATGGTGGTTATATGGAAATGGATACT
GTACAGATTGAGGGTGTCAATTCTACAAAGCGTGTAACAAAGGCCACTTTGAAAGATAGTTCTACATTGGTTATTCAAGA
GAAAATAATGACTCATGGAAAGCAAACTGCTGAGACAGAATTTGAAGTGGATTTAGATGGTGTGAACTCTAGTACCAATG
TAATATCAAGATCTGTAGCAAAAGATAATTCACATCAATTATTTTTATCCAAAATTAATGGAAATAATAAATGTGCAGGA
CATACAGAATGTGATGCAATTATCATGGATAATGCAAGTGTAAGAGCAATTCCTGAAATTGCAGCCAATTGTATTGATGC
AAGTTTAATTCATGAAGCAGCTATTGGCAAGATTTGCGGGGAACAGCTTATTAAGCTAATGACCTTAGGGCTTACGGAAA
TAGAAGCAGAAGAACAAATCATTAATGGATTTTTAAAGTAA

Upstream 100 bases:

>100_bases
ATTGATGATGGTGAAGTAAAACAAGTTGGCAAGAAAGATGAAATACTTCAGGGACTATTGAATAGTTCTGAAAGTTGTAA
ATTTTACAAAGGAGAATGAG

Downstream 100 bases:

>100_bases
TTATAGTATATAATGAGTGAGATTATGTTTTTTACAGAATATTAATGCATGAAAAAAGATATTGACTAAAAATGAATAAA
AGGTGACATAGCATAAATGT

Product: ABC transporter system permease involved in Fe-S cluster assembly

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MMNAIHRNLLKEVIGFHEIPIGAYNIRTNGKAVGRNTTENIDIVIKTDKPGIDIIIKPNTMNESVHIPVLLSESGFKEMI
YNDFYVGENSDVTIIAGCGIHNGGSEASEHNGTHSFFIGKNAKVKYVEKHYGTGDGNGERIMNPTTIIKIDNGGYMEMDT
VQIEGVNSTKRVTKATLKDSSTLVIQEKIMTHGKQTAETEFEVDLDGVNSSTNVISRSVAKDNSHQLFLSKINGNNKCAG
HTECDAIIMDNASVRAIPEIAANCIDASLIHEAAIGKICGEQLIKLMTLGLTEIEAEEQIINGFLK

Sequences:

>Translated_306_residues
MMNAIHRNLLKEVIGFHEIPIGAYNIRTNGKAVGRNTTENIDIVIKTDKPGIDIIIKPNTMNESVHIPVLLSESGFKEMI
YNDFYVGENSDVTIIAGCGIHNGGSEASEHNGTHSFFIGKNAKVKYVEKHYGTGDGNGERIMNPTTIIKIDNGGYMEMDT
VQIEGVNSTKRVTKATLKDSSTLVIQEKIMTHGKQTAETEFEVDLDGVNSSTNVISRSVAKDNSHQLFLSKINGNNKCAG
HTECDAIIMDNASVRAIPEIAANCIDASLIHEAAIGKICGEQLIKLMTLGLTEIEAEEQIINGFLK
>Mature_306_residues
MMNAIHRNLLKEVIGFHEIPIGAYNIRTNGKAVGRNTTENIDIVIKTDKPGIDIIIKPNTMNESVHIPVLLSESGFKEMI
YNDFYVGENSDVTIIAGCGIHNGGSEASEHNGTHSFFIGKNAKVKYVEKHYGTGDGNGERIMNPTTIIKIDNGGYMEMDT
VQIEGVNSTKRVTKATLKDSSTLVIQEKIMTHGKQTAETEFEVDLDGVNSSTNVISRSVAKDNSHQLFLSKINGNNKCAG
HTECDAIIMDNASVRAIPEIAANCIDASLIHEAAIGKICGEQLIKLMTLGLTEIEAEEQIINGFLK

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=226, Percent_Identity=27.4336283185841, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 33331; Mature: 33331

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNAIHRNLLKEVIGFHEIPIGAYNIRTNGKAVGRNTTENIDIVIKTDKPGIDIIIKPNT
CCHHHHHHHHHHHHCCCCCCCEEEEEECCCEEECCCCCCCEEEEEEECCCCEEEEECCCC
MNESVHIPVLLSESGFKEMIYNDFYVGENSDVTIIAGCGIHNGGSEASEHNGTHSFFIGK
CCCCEEEEEEECCCCCHHHHHCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEC
NAKVKYVEKHYGTGDGNGERIMNPTTIIKIDNGGYMEMDTVQIEGVNSTKRVTKATLKDS
CCEEEEEEECCCCCCCCCCEEECCEEEEEECCCCEEEEEEEEEECCCCHHHHHHHHHCCC
STLVIQEKIMTHGKQTAETEFEVDLDGVNSSTNVISRSVAKDNSHQLFLSKINGNNKCAG
CEEEEEHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCC
HTECDAIIMDNASVRAIPEIAANCIDASLIHEAAIGKICGEQLIKLMTLGLTEIEAEEQI
CCCCCEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
INGFLK
HHHHCC
>Mature Secondary Structure
MMNAIHRNLLKEVIGFHEIPIGAYNIRTNGKAVGRNTTENIDIVIKTDKPGIDIIIKPNT
CCHHHHHHHHHHHHCCCCCCCEEEEEECCCEEECCCCCCCEEEEEEECCCCEEEEECCCC
MNESVHIPVLLSESGFKEMIYNDFYVGENSDVTIIAGCGIHNGGSEASEHNGTHSFFIGK
CCCCEEEEEEECCCCCHHHHHCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEC
NAKVKYVEKHYGTGDGNGERIMNPTTIIKIDNGGYMEMDTVQIEGVNSTKRVTKATLKDS
CCEEEEEEECCCCCCCCCCEEECCEEEEEECCCCEEEEEEEEEECCCCHHHHHHHHHCCC
STLVIQEKIMTHGKQTAETEFEVDLDGVNSSTNVISRSVAKDNSHQLFLSKINGNNKCAG
CEEEEEHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCC
HTECDAIIMDNASVRAIPEIAANCIDASLIHEAAIGKICGEQLIKLMTLGLTEIEAEEQI
CCCCCEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
INGFLK
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]