Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is secE

Identifier: 170756293

GI number: 170756293

Start: 3794240

End: 3794467

Strand: Reverse

Name: secE

Synonym: CLD_1010

Alternate gene names: NA

Gene position: 3794467-3794240 (Counterclockwise)

Preceding gene: 170754818

Following gene: 170755479

Centisome position: 95.86

GC content: 29.39

Gene sequence:

>228_bases
ATGGCCACAAATAAAACTACAAATAATATCGCGTCAGCTAATAACAAAGGTTTGAGAGGCTTCTTTAGGGATTTAAAGTT
TGAATTCAAAAGAATAACATGGGCTCCTAAAAAAGATGTAAAAAAAGCAACTGAAACTGTATTAATATTTTGCTTTGTTT
ATATGGTTATTGTTGGAGTATTTGATTATGGATTCAACAACCTATTCAAACTAATATTTAAGCTGTAG

Upstream 100 bases:

>100_bases
AAATACTGCCCACATTGCCATAAACATGCAGCTCATAAGGAAACAAAATAATCTGTTTCGGATTTGATGTCCTTTATAAT
TTTTTAAGGATGTGAGTGAG

Downstream 100 bases:

>100_bases
AAGTGAATAAAAGGAGGGAAATAGGGATATCCTAATCCCTGAAATTATGTCAGAAGAAAAAGCGAAATGGTATGTGGTTC
ATACATATTCAGGATATGAA

Product: preprotein translocase subunit SecE

Products: NA

Alternate protein names: Preprotein Translocase SecE Subunit; Preprotein Translocase SecE

Number of amino acids: Translated: 75; Mature: 74

Protein sequence:

>75_residues
MATNKTTNNIASANNKGLRGFFRDLKFEFKRITWAPKKDVKKATETVLIFCFVYMVIVGVFDYGFNNLFKLIFKL

Sequences:

>Translated_75_residues
MATNKTTNNIASANNKGLRGFFRDLKFEFKRITWAPKKDVKKATETVLIFCFVYMVIVGVFDYGFNNLFKLIFKL
>Mature_74_residues
ATNKTTNNIASANNKGLRGFFRDLKFEFKRITWAPKKDVKKATETVLIFCFVYMVIVGVFDYGFNNLFKLIFKL

Specific function: Unknown

COG id: COG0690

COG function: function code U; Preprotein translocase subunit SecE

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8734; Mature: 8603

Theoretical pI: Translated: 10.69; Mature: 10.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATNKTTNNIASANNKGLRGFFRDLKFEFKRITWAPKKDVKKATETVLIFCFVYMVIVGV
CCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FDYGFNNLFKLIFKL
HHHCHHHHHHHHHCC
>Mature Secondary Structure 
ATNKTTNNIASANNKGLRGFFRDLKFEFKRITWAPKKDVKKATETVLIFCFVYMVIVGV
CCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FDYGFNNLFKLIFKL
HHHCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA