| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is secE
Identifier: 170756293
GI number: 170756293
Start: 3794240
End: 3794467
Strand: Reverse
Name: secE
Synonym: CLD_1010
Alternate gene names: NA
Gene position: 3794467-3794240 (Counterclockwise)
Preceding gene: 170754818
Following gene: 170755479
Centisome position: 95.86
GC content: 29.39
Gene sequence:
>228_bases ATGGCCACAAATAAAACTACAAATAATATCGCGTCAGCTAATAACAAAGGTTTGAGAGGCTTCTTTAGGGATTTAAAGTT TGAATTCAAAAGAATAACATGGGCTCCTAAAAAAGATGTAAAAAAAGCAACTGAAACTGTATTAATATTTTGCTTTGTTT ATATGGTTATTGTTGGAGTATTTGATTATGGATTCAACAACCTATTCAAACTAATATTTAAGCTGTAG
Upstream 100 bases:
>100_bases AAATACTGCCCACATTGCCATAAACATGCAGCTCATAAGGAAACAAAATAATCTGTTTCGGATTTGATGTCCTTTATAAT TTTTTAAGGATGTGAGTGAG
Downstream 100 bases:
>100_bases AAGTGAATAAAAGGAGGGAAATAGGGATATCCTAATCCCTGAAATTATGTCAGAAGAAAAAGCGAAATGGTATGTGGTTC ATACATATTCAGGATATGAA
Product: preprotein translocase subunit SecE
Products: NA
Alternate protein names: Preprotein Translocase SecE Subunit; Preprotein Translocase SecE
Number of amino acids: Translated: 75; Mature: 74
Protein sequence:
>75_residues MATNKTTNNIASANNKGLRGFFRDLKFEFKRITWAPKKDVKKATETVLIFCFVYMVIVGVFDYGFNNLFKLIFKL
Sequences:
>Translated_75_residues MATNKTTNNIASANNKGLRGFFRDLKFEFKRITWAPKKDVKKATETVLIFCFVYMVIVGVFDYGFNNLFKLIFKL >Mature_74_residues ATNKTTNNIASANNKGLRGFFRDLKFEFKRITWAPKKDVKKATETVLIFCFVYMVIVGVFDYGFNNLFKLIFKL
Specific function: Unknown
COG id: COG0690
COG function: function code U; Preprotein translocase subunit SecE
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8734; Mature: 8603
Theoretical pI: Translated: 10.69; Mature: 10.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATNKTTNNIASANNKGLRGFFRDLKFEFKRITWAPKKDVKKATETVLIFCFVYMVIVGV CCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH FDYGFNNLFKLIFKL HHHCHHHHHHHHHCC >Mature Secondary Structure ATNKTTNNIASANNKGLRGFFRDLKFEFKRITWAPKKDVKKATETVLIFCFVYMVIVGV CCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH FDYGFNNLFKLIFKL HHHCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA