Click here to switch to the map view.

The map label for this gene is rpmG

Identifier: 170754818

GI number: 170754818

Start: 3794517

End: 3794666

Strand: Reverse

Name: rpmG

Synonym: CLD_1009

Alternate gene names: 170754818

Gene position: 3794666-3794517 (Counterclockwise)

Preceding gene: 170754754

Following gene: 170756293

Centisome position: 95.87

GC content: 31.33

Gene sequence:

>150_bases
ATGAGAGTAAAAGTAACACTAGCTTGTACAGAGTGCAAACGAAGAAATTATAATACAATGAAAAACAAGAAAAATGATCC
AGATAGATTAGAAATGAACAAATACTGCCCACATTGCCATAAACATGCAGCTCATAAGGAAACAAAATAA

Upstream 100 bases:

>100_bases
TGACATATACCATTAGTTATGATAAAGTAAGTAAGTGATGCAAAAAAATAAAAAGAAGTAGAACCTACACATATAGGTTA
TGTACTAGGAGGTGTAGATC

Downstream 100 bases:

>100_bases
TCTGTTTCGGATTTGATGTCCTTTATAATTTTTTAAGGATGTGAGTGAGATGGCCACAAATAAAACTACAAATAATATCG
CGTCAGCTAATAACAAAGGT

Product: 50S ribosomal protein L33

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 49; Mature: 49

Protein sequence:

>49_residues
MRVKVTLACTECKRRNYNTMKNKKNDPDRLEMNKYCPHCHKHAAHKETK

Sequences:

>Translated_49_residues
MRVKVTLACTECKRRNYNTMKNKKNDPDRLEMNKYCPHCHKHAAHKETK
>Mature_49_residues
MRVKVTLACTECKRRNYNTMKNKKNDPDRLEMNKYCPHCHKHAAHKETK

Specific function: Unknown

COG id: COG0267

COG function: function code J; Ribosomal protein L33

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L33P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL33_CLOB1 (A7FZ84)

Other databases:

- EMBL:   CP000726
- RefSeq:   YP_001385811.1
- ProteinModelPortal:   A7FZ84
- SMR:   A7FZ84
- STRING:   A7FZ84
- GeneID:   5396055
- GenomeReviews:   CP000726_GR
- KEGG:   cba:CLB_3552
- eggNOG:   COG0267
- HOGENOM:   HBG751058
- ProtClustDB:   PRK00504
- BioCyc:   CBOT441770:CLB_3552-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00294
- InterPro:   IPR001705
- InterPro:   IPR018264
- InterPro:   IPR011332
- TIGRFAMs:   TIGR01023

Pfam domain/function: PF00471 Ribosomal_L33; SSF57829 Ribosomal_zn-bd

EC number: NA

Molecular weight: Translated: 5902; Mature: 5902

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: PS00582 RIBOSOMAL_L33

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

8.2 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
14.3 %Cys+Met (Translated Protein)
8.2 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
14.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVKVTLACTECKRRNYNTMKNKKNDPDRLEMNKYCPHCHKHAAHKETK
CCEEEEEECCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCC
>Mature Secondary Structure
MRVKVTLACTECKRRNYNTMKNKKNDPDRLEMNKYCPHCHKHAAHKETK
CCEEEEEECCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA