| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756275
Identifier: 170756275
GI number: 170756275
Start: 2179912
End: 2180037
Strand: Reverse
Name: 170756275
Synonym: CLD_2594
Alternate gene names: NA
Gene position: 2180037-2179912 (Counterclockwise)
Preceding gene: 170756280
Following gene: 170757363
Centisome position: 55.08
GC content: 28.57
Gene sequence:
>126_bases ATGACATTAAGTGCAATGATATTCTTCGGTATAGGTGCAACAGTACTTTGGGGAGGATTACTTGCTACTATAATAATTTC AATGAAAAAAGATAGTTATTCAGAAAATAGCAAAATACAAAATTAA
Upstream 100 bases:
>100_bases GGAGTTATTCTAATAGGAATTACTGTATCAATATTAATAAGTAAACAACCTTGGAGAGATAATATTAATTTAAAAAATGA ATAAAGGTGTGGTGATAAAA
Downstream 100 bases:
>100_bases GATTAATGGATTTGCAGTGCTAAATGAAAGTATAAGCCATTTTATTATAGAAGAACTTAATAAGAGAGTCTGTCATATTT TAATGACAGACCCTCTGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 41; Mature: 40
Protein sequence:
>41_residues MTLSAMIFFGIGATVLWGGLLATIIISMKKDSYSENSKIQN
Sequences:
>Translated_41_residues MTLSAMIFFGIGATVLWGGLLATIIISMKKDSYSENSKIQN >Mature_40_residues TLSAMIFFGIGATVLWGGLLATIIISMKKDSYSENSKIQN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4451; Mature: 4320
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.3 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSAMIFFGIGATVLWGGLLATIIISMKKDSYSENSKIQN CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure TLSAMIFFGIGATVLWGGLLATIIISMKKDSYSENSKIQN CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA