| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756257
Identifier: 170756257
GI number: 170756257
Start: 472006
End: 472272
Strand: Direct
Name: 170756257
Synonym: CLD_0371
Alternate gene names: NA
Gene position: 472006-472272 (Clockwise)
Preceding gene: 170757215
Following gene: 170755647
Centisome position: 11.92
GC content: 28.46
Gene sequence:
>267_bases ATGAATTTCTATTGTTTTACAAAAACTACATTAATAGCTTTTACTAAAGCTTCTACTCTATCTCCTTCTTTAAATCCCGC ATCTTCTAAACTCTCTTTTGTCATTACAGACGTAACTACAGGTGAAGTAGTTCATCCATCAACAGTCATTTTAATTTGTG CCATAACATTATCAGCTTTTATTTCATCTACTTTTCCTATAATTTTATTTCTTACTCCAGCTTCCATTACTAAACCTCCT AAATCTATATTCTATTATTATTATTAA
Upstream 100 bases:
>100_bases GAAGATAAATCATATCAAAAGACTATTAAATGAAATAATTCATTTAATAGTCTTTTATTTTCATGTAATTAATATTTATC ATAGATAATAAGTAAGGAAT
Downstream 100 bases:
>100_bases TTATAGTTAAATATAAATGCATAAATTTTATTTATAGATATAATTAGATTTAGTTATAAACTTAAGTTTAAGAAGATAAA TAGCTATTACCATTTCTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 88; Mature: 88
Protein sequence:
>88_residues MNFYCFTKTTLIAFTKASTLSPSLNPASSKLSFVITDVTTGEVVHPSTVILICAITLSAFISSTFPIILFLTPASITKPP KSIFYYYY
Sequences:
>Translated_88_residues MNFYCFTKTTLIAFTKASTLSPSLNPASSKLSFVITDVTTGEVVHPSTVILICAITLSAFISSTFPIILFLTPASITKPP KSIFYYYY >Mature_88_residues MNFYCFTKTTLIAFTKASTLSPSLNPASSKLSFVITDVTTGEVVHPSTVILICAITLSAFISSTFPIILFLTPASITKPP KSIFYYYY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9654; Mature: 9654
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFYCFTKTTLIAFTKASTLSPSLNPASSKLSFVITDVTTGEVVHPSTVILICAITLSAF CCEEEEECEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCEECCCHHHHHHHHHHHHH ISSTFPIILFLTPASITKPPKSIFYYYY HCCCCCEEEEEECCCCCCCCCCEEEEEC >Mature Secondary Structure MNFYCFTKTTLIAFTKASTLSPSLNPASSKLSFVITDVTTGEVVHPSTVILICAITLSAF CCEEEEECEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCEECCCHHHHHHHHHHHHH ISSTFPIILFLTPASITKPPKSIFYYYY HCCCCCEEEEEECCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA