| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756118
Identifier: 170756118
GI number: 170756118
Start: 2080512
End: 2081363
Strand: Reverse
Name: 170756118
Synonym: CLD_2678
Alternate gene names: NA
Gene position: 2081363-2080512 (Counterclockwise)
Preceding gene: 170756831
Following gene: 170755681
Centisome position: 52.58
GC content: 31.46
Gene sequence:
>852_bases ATGAAAAAAATTTTGTTACTTTTATCTAGTATTTTTTTAACATTAAGTTTAGTGGCCTGTGATAAAAGTAATTCTACAGA AAGTACTAAGGAAGAGGATAAGAGTAGGACTATGATACTGGCTACAACTACCAGTACTCAAGATTCAGGACTTTTAGATT ATTTGCTTCCTGAGTTTAAAAAGGATACAGGAATAGATGTTAAGGTAGTTGCAAAGGGAACTGGTGAAGCTCTTAAACTT GGACAAAATGGTGATGCAGATTGTCTTCTAGTTCATGCTAAAGCTAAAGAAGAAGAGTTTATTAAAAAAGGTTATGGTAC TGAAAGACATGATGTTATGTACAATGATTTTATTATAGTTGGCCCAAAGGAAGATACTGCAAAGTTAAAAGAAAAAGCTC CTAATAATGCAGCAGAAGCTTTTAAATTAATTGATGAAAGTAAAGCTAGTTTTGTTTCTAGAGGAGATGAATCAGGAACT CATACTAAAGAAAAGAAGCTTTGGAAAGATATTAAAGTAGATCCTAAGGGAGAATGGTATATAAGTGCAGGTAAAGGTAT GGGAGCAGTATTACAGATGGCAAATGAAAAAAAGGCCTATACTTTAACAGATAGAGCTACTTATTTGTCTATGAAGGATA AATTAGATTTAGTAATTGTAACTGAGAAAAGTAATGATTTATATAATCAGTATGGAGTTATAATGTTAAATACTGAAAAG AATAAAATTAAAGAAAAGGAAGCCAAGGAATATATAGATTGGATGCTTTCTGATAAAGGGCAAAAACTTATAGGAGAGTA TGGAAAAGAAAAATACGGACAAGCGCTTTTTGTAGCTAACGGAAAGAAATAG
Upstream 100 bases:
>100_bases AATGTAGAGTATATAATATTTTGTATTTTTTTATAATTTAATATGCGGAAAATACAGAATATTCTATATACTTAATAAGT ACAATGAGGGGGATGTTTTC
Downstream 100 bases:
>100_bases GTGATATTATGGAGCAGGAAATTTTTAATATAATAAATTTAAAAGAAATTATTCCTGTGGTATTAATGTCTCTTTATGTT TCATTAACTTCAACTTTAAT
Product: tungstate ABC transporter, tungstate-binding protein
Products: NA
Alternate protein names: Signal Peptide Protein; TUNGstate ABC Transporter Permease; Molybdate Or TUNGstate Transport; TUNGstate ABC Transporter Permease-Like Protein; Signal Peptide; TUNGstate Abc Transporter Permease; ABC-Type Transport Protein Permease Component; ABC Transporter; Basic Organic Compound ABC-Transporter; ABC Transporter Permease Protein; ABC TUNGstate Transporter Permease Component; ABC-Type Transport System Permease Component; ABC Transporter Periplasmic Protein; ABC-Type TUNGstate Transport System Permease Component-Like; Periplasmic Protein
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MKKILLLLSSIFLTLSLVACDKSNSTESTKEEDKSRTMILATTTSTQDSGLLDYLLPEFKKDTGIDVKVVAKGTGEALKL GQNGDADCLLVHAKAKEEEFIKKGYGTERHDVMYNDFIIVGPKEDTAKLKEKAPNNAAEAFKLIDESKASFVSRGDESGT HTKEKKLWKDIKVDPKGEWYISAGKGMGAVLQMANEKKAYTLTDRATYLSMKDKLDLVIVTEKSNDLYNQYGVIMLNTEK NKIKEKEAKEYIDWMLSDKGQKLIGEYGKEKYGQALFVANGKK
Sequences:
>Translated_283_residues MKKILLLLSSIFLTLSLVACDKSNSTESTKEEDKSRTMILATTTSTQDSGLLDYLLPEFKKDTGIDVKVVAKGTGEALKL GQNGDADCLLVHAKAKEEEFIKKGYGTERHDVMYNDFIIVGPKEDTAKLKEKAPNNAAEAFKLIDESKASFVSRGDESGT HTKEKKLWKDIKVDPKGEWYISAGKGMGAVLQMANEKKAYTLTDRATYLSMKDKLDLVIVTEKSNDLYNQYGVIMLNTEK NKIKEKEAKEYIDWMLSDKGQKLIGEYGKEKYGQALFVANGKK >Mature_283_residues MKKILLLLSSIFLTLSLVACDKSNSTESTKEEDKSRTMILATTTSTQDSGLLDYLLPEFKKDTGIDVKVVAKGTGEALKL GQNGDADCLLVHAKAKEEEFIKKGYGTERHDVMYNDFIIVGPKEDTAKLKEKAPNNAAEAFKLIDESKASFVSRGDESGT HTKEKKLWKDIKVDPKGEWYISAGKGMGAVLQMANEKKAYTLTDRATYLSMKDKLDLVIVTEKSNDLYNQYGVIMLNTEK NKIKEKEAKEYIDWMLSDKGQKLIGEYGKEKYGQALFVANGKK
Specific function: Unknown
COG id: COG2998
COG function: function code H; ABC-type tungstate transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31593; Mature: 31593
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKILLLLSSIFLTLSLVACDKSNSTESTKEEDKSRTMILATTTSTQDSGLLDYLLPEFK CHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHC KDTGIDVKVVAKGTGEALKLGQNGDADCLLVHAKAKEEEFIKKGYGTERHDVMYNDFIIV CCCCCEEEEEECCCCCEEEECCCCCCCEEEEEECCCHHHHHHHCCCCCCCCEEECCEEEE GPKEDTAKLKEKAPNNAAEAFKLIDESKASFVSRGDESGTHTKEKKLWKDIKVDPKGEWY CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCEE ISAGKGMGAVLQMANEKKAYTLTDRATYLSMKDKLDLVIVTEKSNDLYNQYGVIMLNTEK EECCCCHHHHHHHCCCCCEEEEECCEEEEEECCCEEEEEEEECCCCHHHCCCEEEEECCH NKIKEKEAKEYIDWMLSDKGQKLIGEYGKEKYGQALFVANGKK HHHHHHHHHHHHHHHHCCCCHHHHHHHCHHHHCCEEEEECCCC >Mature Secondary Structure MKKILLLLSSIFLTLSLVACDKSNSTESTKEEDKSRTMILATTTSTQDSGLLDYLLPEFK CHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHC KDTGIDVKVVAKGTGEALKLGQNGDADCLLVHAKAKEEEFIKKGYGTERHDVMYNDFIIV CCCCCEEEEEECCCCCEEEECCCCCCCEEEEEECCCHHHHHHHCCCCCCCCEEECCEEEE GPKEDTAKLKEKAPNNAAEAFKLIDESKASFVSRGDESGTHTKEKKLWKDIKVDPKGEWY CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCEE ISAGKGMGAVLQMANEKKAYTLTDRATYLSMKDKLDLVIVTEKSNDLYNQYGVIMLNTEK EECCCCHHHHHHHCCCCCEEEEECCEEEEEECCCEEEEEEEECCCCHHHCCCEEEEECCH NKIKEKEAKEYIDWMLSDKGQKLIGEYGKEKYGQALFVANGKK HHHHHHHHHHHHHHHHCCCCHHHHHHHCHHHHCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA