| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756113
Identifier: 170756113
GI number: 170756113
Start: 1957329
End: 1957556
Strand: Reverse
Name: 170756113
Synonym: CLD_2805
Alternate gene names: NA
Gene position: 1957556-1957329 (Counterclockwise)
Preceding gene: 170754300
Following gene: 170754472
Centisome position: 49.46
GC content: 28.95
Gene sequence:
>228_bases ATGTGCATTGCAATACCGGGGAAAATTGTAAGTATTGATGGCTACTATGCTATAACAAATACTATGGATATAGAAAGTGA AATAAATATATCACTTATAGAAAATCCATCTATCAATGACTATGTTCTAATTCATGCAGGTTGTGCTATAGAAAAAATAG ACTATGAGTATTTTTCTTACTTAGAACAAACTATAAAAGAAGCCTTAAGGAGTAATAAAGATGGATAA
Upstream 100 bases:
>100_bases TTTAAAGTGTTTTTCAATGAAAAAGTTCCTATAAATGATGAAGGAATAAGCCTTGGTCAATTAGCTATTGGTGACTCTAT TATAGAAAGGGAGAAAAGGA
Downstream 100 bases:
>100_bases TTGCAATTTAATAATTGAAATTATGGAGAAGATAAAAGCTATAGATACAAGTCCTTTGAAGATAATGGAAGTGTGTGGTA GCCATACTGAAGTTATAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 75; Mature: 75
Protein sequence:
>75_residues MCIAIPGKIVSIDGYYAITNTMDIESEINISLIENPSINDYVLIHAGCAIEKIDYEYFSYLEQTIKEALRSNKDG
Sequences:
>Translated_75_residues MCIAIPGKIVSIDGYYAITNTMDIESEINISLIENPSINDYVLIHAGCAIEKIDYEYFSYLEQTIKEALRSNKDG >Mature_75_residues MCIAIPGKIVSIDGYYAITNTMDIESEINISLIENPSINDYVLIHAGCAIEKIDYEYFSYLEQTIKEALRSNKDG
Specific function: Unknown
COG id: COG0298
COG function: function code O; Hydrogenase maturation factor
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8436; Mature: 8436
Theoretical pI: Translated: 4.05; Mature: 4.05
Prosite motif: PS01097 HUPF_HYPC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCIAIPGKIVSIDGYYAITNTMDIESEINISLIENPSINDYVLIHAGCAIEKIDYEYFSY CEEECCCEEEEECCEEEEECCEECCCCCEEEEECCCCCCCEEEEECCCEEEEECHHHHHH LEQTIKEALRSNKDG HHHHHHHHHHCCCCC >Mature Secondary Structure MCIAIPGKIVSIDGYYAITNTMDIESEINISLIENPSINDYVLIHAGCAIEKIDYEYFSY CEEECCCEEEEECCEEEEECCEECCCCCEEEEECCCCCCCEEEEECCCEEEEECHHHHHH LEQTIKEALRSNKDG HHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA