| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is ygcG [C]
Identifier: 170756111
GI number: 170756111
Start: 581170
End: 582021
Strand: Direct
Name: ygcG [C]
Synonym: CLD_0279
Alternate gene names: 170756111
Gene position: 581170-582021 (Clockwise)
Preceding gene: 170754553
Following gene: 170755401
Centisome position: 14.68
GC content: 35.56
Gene sequence:
>852_bases GTGGAAAATTTTTTTGAAAAATATCTAAGCAAAATAAGTTTAGTTTTTATATTAGTAATGGCATTAATTATGGTTTGTCC AGTATTAACAAAGGCAGAAAAAAATTTCCCTAAACCTACAAATCTAAAATATGTAAATGATTATGCTAGAGTTATAGATG ATGCAACTAAAGAGTATATTGTTTCAGTAGGAAATGAACTAGAGCAAAAAACAGGAGCGCAAATGACGGTAGTAGTAATA GACTCACTGGAAGGCTCTGATATAGAATCCTATGCTAATAGTTTATTTAGACAATGGGGACTAGGACAAAAGGGTAAAGA TAATGGAGTTCTAATACTTTTGTCTATAAAAGATAAAAAGTGGAGAGTAGAGGTAGGAAGAGGATTAGAAGGAAGAATAA CAGATATATATTCTTCTAGAGTAATGGATGATATAGCTAAACCTTTACTTAAAGAAGAAAAATATGGTGAAGCCATGAAA AAGTCCTATTCTGTATTTGCGGATGATGTAGCTAAAGAATATAATGTTACTTTAGAAAAAAATGAAAAAGTTAAAGTGCC ACAAAAAAAGAAGAGCGGAGGAGGCGTTATACCCGCTATAATTTTTATTATAATTTTGTTAAGTATTTTTGGTGGAAGAG GTGGAAGACGAGGAAGAAGAAGAACTTCCATTTGGGATCTTATATTCCTAAATTCACTTTTCTCTAATAGAAGAAATAGA TGGGATGACGATGATGATGATCCCTTTGGCGGCGGAGGTTTTGGCGGCTTTGGTGGTGGCTCTTCTGGCGGAGGCTTTGG AGGTTTCGGCGGCGGAAGTTCCGGTGGCGGAGGTTCCTCTGGCGGATGGTAG
Upstream 100 bases:
>100_bases TATAGCTGGTATGTTTAGATTTAGTGAAAAACCATATTTTAAAGCAGAAGTAGGAGCAAGTAAAGCACCCAAAGTAGATT TCTCAAAGTAGGTGAAAAAC
Downstream 100 bases:
>100_bases CCTGTAGTTTATAGATTAGAAAAGTATAGTTTTAATGAAGAGGGTGTCTTAAAATAGATTTAATTTTAGGATACCCTCTT TAATTTCATGATATTATTTT
Product: beta-propeller domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MENFFEKYLSKISLVFILVMALIMVCPVLTKAEKNFPKPTNLKYVNDYARVIDDATKEYIVSVGNELEQKTGAQMTVVVI DSLEGSDIESYANSLFRQWGLGQKGKDNGVLILLSIKDKKWRVEVGRGLEGRITDIYSSRVMDDIAKPLLKEEKYGEAMK KSYSVFADDVAKEYNVTLEKNEKVKVPQKKKSGGGVIPAIIFIIILLSIFGGRGGRRGRRRTSIWDLIFLNSLFSNRRNR WDDDDDDPFGGGGFGGFGGGSSGGGFGGFGGGSSGGGGSSGGW
Sequences:
>Translated_283_residues MENFFEKYLSKISLVFILVMALIMVCPVLTKAEKNFPKPTNLKYVNDYARVIDDATKEYIVSVGNELEQKTGAQMTVVVI DSLEGSDIESYANSLFRQWGLGQKGKDNGVLILLSIKDKKWRVEVGRGLEGRITDIYSSRVMDDIAKPLLKEEKYGEAMK KSYSVFADDVAKEYNVTLEKNEKVKVPQKKKSGGGVIPAIIFIIILLSIFGGRGGRRGRRRTSIWDLIFLNSLFSNRRNR WDDDDDDPFGGGGFGGFGGGSSGGGFGGFGGGSSGGGGSSGGW >Mature_283_residues MENFFEKYLSKISLVFILVMALIMVCPVLTKAEKNFPKPTNLKYVNDYARVIDDATKEYIVSVGNELEQKTGAQMTVVVI DSLEGSDIESYANSLFRQWGLGQKGKDNGVLILLSIKDKKWRVEVGRGLEGRITDIYSSRVMDDIAKPLLKEEKYGEAMK KSYSVFADDVAKEYNVTLEKNEKVKVPQKKKSGGGVIPAIIFIIILLSIFGGRGGRRGRRRTSIWDLIFLNSLFSNRRNR WDDDDDDPFGGGGFGGFGGGSSGGGFGGFGGGSSGGGGSSGGW
Specific function: Unknown
COG id: COG1512
COG function: function code R; Beta-propeller domains of methanol dehydrogenase type
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082161, Length=162, Percent_Identity=20.9876543209877, Blast_Score=65, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30943; Mature: 30943
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENFFEKYLSKISLVFILVMALIMVCPVLTKAEKNFPKPTNLKYVNDYARVIDDATKEYI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH VSVGNELEQKTGAQMTVVVIDSLEGSDIESYANSLFRQWGLGQKGKDNGVLILLSIKDKK HHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCE WRVEVGRGLEGRITDIYSSRVMDDIAKPLLKEEKYGEAMKKSYSVFADDVAKEYNVTLEK EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECC NEKVKVPQKKKSGGGVIPAIIFIIILLSIFGGRGGRRGRRRTSIWDLIFLNSLFSNRRNR CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC WDDDDDDPFGGGGFGGFGGGSSGGGFGGFGGGSSGGGGSSGGW CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MENFFEKYLSKISLVFILVMALIMVCPVLTKAEKNFPKPTNLKYVNDYARVIDDATKEYI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH VSVGNELEQKTGAQMTVVVIDSLEGSDIESYANSLFRQWGLGQKGKDNGVLILLSIKDKK HHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCE WRVEVGRGLEGRITDIYSSRVMDDIAKPLLKEEKYGEAMKKSYSVFADDVAKEYNVTLEK EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECC NEKVKVPQKKKSGGGVIPAIIFIIILLSIFGGRGGRRGRRRTSIWDLIFLNSLFSNRRNR CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC WDDDDDDPFGGGGFGGFGGGSSGGGFGGFGGGSSGGGGSSGGW CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA