| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756027
Identifier: 170756027
GI number: 170756027
Start: 2896315
End: 2898453
Strand: Reverse
Name: 170756027
Synonym: CLD_1847
Alternate gene names: NA
Gene position: 2898453-2896315 (Counterclockwise)
Preceding gene: 170756924
Following gene: 170754997
Centisome position: 73.23
GC content: 22.39
Gene sequence:
>2139_bases ATGGAATATATAAATGGATATAAAATTCAAGCAACGAATAATATACAAAAACTAATTAATGAAGGAAAAATAAAAGAAGC AAAAAGTTTGATTCGAAAATTTGAAGACAGTACTAAAGATGACATAGATATAATATCTATGAAAGCTGTAATATTAATAA TGGATAACAAATTAGAAGAGGCTAAACAAATATTAAAATATGCTATTAATTTAGAGAAAACTAACCCTGATGTTCTTTTT AATTTAGCTTATATATACGAAATTAGTGGAGAATATGAAAAAGCTTATGAGTATTATTCAAATGCTAAAAATAATTCAAA GGATAATGAATTTATATCTAATACAGAAAATATAATGAATAAATTAAAAGAAAATTTAAATTTGCAGAATAATGATGAGA AAATAAAAACAAGCATAGTTATACTAACATATAATAAGTTAGAGTATACTAAATTATGTATAGATAGTATTAGAAAATAT ACCAAATCTGGAACTTATGAAATTGTAGTAGTTGATAATAATTCTACTGATGATACAAGAGAATGGCTAAAAGAACAAAA AGATATAAAGGTAATATTAAATGATGAAAATTTAGGTTTCCCTGGTGGGTGTAATGTAGGGATAAATGCGGCAGAAAAAG AAAATGACATACTTTTATTAAATAATGATACTATAGTGACTCCAAGATGGTTAGAAAATCTTAAAAAATGTTTATATAGT GATGAACATATAGGAGCAGTTGGTGCTATCACAAATAATTGTTCTAATTATCAAGCGATAAAAACTAAATATGAATCAAT AGATGAAATGATAGATTTTGCGGATAGATATAATATATCTGATTTATCGAAATGGGAACAAAAAGTAAGATTGATAGGCT ATTGTATGTTAATTAAAAGGAAAGTTATAGATAAGATAGGTTTATTAGATGAAAGATTTTTTCCAGGTAATTTTGAAGAT GATGATTTAGGATATAGAATTCAATCAGAAGGATATAAATTAATACTTTGTAATGATACTTTTATCCATCATTTTGGAAG TGCATCCTTTAAAGAAAATCCAGAAAAATTCAGTAAATTACTTACGGAAAATTCTAAAAGATTTATAAATAAATGGGGAT TCGATTCTGAAAAAAATTCTTTTATAAACTTCAATATTATAGAAAAAATTAATAAGGTTGAATCAAATATCAATGTTCTA CATATAGGATGTGGTACAGGAGCTCTTTTATATAAAATAAAACATGTATTTAAAGATGCAAAATTATATGGGATGGATAA TAGTGAGATAACAACTAAAATATTAAAAAACTTTGTAAATGTAAAGGTATCAAGCATAGATGACGAACTTTATTATCCTG AAGATTTTTTTGATTATATTATAGTTACTAATAGTATAGAAGATTCAAAAGCCCCTAGAACAGCATTAAAAAATTTATTG AAATTTCTTAAAGAAACAGGAAAAATAATAATTACTATAAAAAACTCAAACTTTTATGCAGAATTTATTAAAATTCTGAT GGGTAGTACGGACTTTAAAGATAAAAATTTATATAATTATAATGAGATTAAGGAGATTTTTTCTTCTAAAGAATTTTTAA ATGCTAATATTCAAAGTCAAACTGTAGATATAACTACAGAGAATGAAATGATAATGGATCATATTTGTAAACTTACTGGA GAAAATATGAAATCTCAGTATATAACTAAAGAATATTTAATAACATTTAATAAAAATTCTATAGATAAAAAAGAAATAAA GTATATTTTAAGAAGAATAGAAAATTATATTGATATTAAAGATAATTTGAAGATATTAAATAATTATCTAAATAAAATAG ACTATAAAGTATTAAATGAAATAATTATGAAAGATATAATAAGAAAAGAAGAAGTGTTTAATAATATTGCTATAAATTTT TATGATAATCATAAATATGAAAGGGCATTAGAAATATTGGAATTATCATATAAATATAATCCTAGTTATAAAGATACAGT TTATAATATCGCATATATAATATACCAATTAGGAGATAAGAAAACAGCCTTAAATTATTTGGAGTTATTTTCTAAAAATT CTTATGATGAGGATATATTAAAATTAAAGAAAGAAATATTAGGTGATATAAATGAATGA
Upstream 100 bases:
>100_bases ATAATAAAAGATGAAATATTACCATTAATGAAAGAATGGCAATTGATTATAGGAAGTAGTATAGTAGCATAATTGATAAA GAATTTTACGGGGTGAAGTA
Downstream 100 bases:
>100_bases TAAAAAAATATGTTTTATAACTTGTATAAATGATGATAGACAATATGAGGAATGCCTATTATATATAAATAATTTGAATA TACCTAAAGGCTATGAAATA
Product: glycosyltransferase
Products: NA
Alternate protein names: Glycosyltransferase; Glycosyl Transferase Group 2 Family Protein; Glycosyl Transferase Group 2 Family; Glycosyl Transferase; Family 2 Glycosyl Transferase; Glycosyl Transferase Family 2 Protein; Glycosyl Transferase GT2 Family Protein; Glycosyl Transferase GT2 Family; Glycosyltransferase/Rhamnosyltransferase; Rhamnosyltransferase; Rhamnosyl Transferase Related Protein; Glycosly Transferase; Bifunctional SAM-Dependent Methyltransferase Type; TPR-Repeat-Containing Protein; Rhamnosyl Transferase RfbQ; Family 2 Glycosyltransferase; Capsule-Related Glycosyltransferase; B-Glycosyltransferase; Group 2 Family Glycosyltransferase; Methyltransferase FkbM Family; Glycosyl Transferase Group 1/2 Family Protein; Methyltransferase And Glycosyltransferase; FkbM Family Methyltransferase; DTDP-Rhamnosyl Transferase RfbF
Number of amino acids: Translated: 712; Mature: 712
Protein sequence:
>712_residues MEYINGYKIQATNNIQKLINEGKIKEAKSLIRKFEDSTKDDIDIISMKAVILIMDNKLEEAKQILKYAINLEKTNPDVLF NLAYIYEISGEYEKAYEYYSNAKNNSKDNEFISNTENIMNKLKENLNLQNNDEKIKTSIVILTYNKLEYTKLCIDSIRKY TKSGTYEIVVVDNNSTDDTREWLKEQKDIKVILNDENLGFPGGCNVGINAAEKENDILLLNNDTIVTPRWLENLKKCLYS DEHIGAVGAITNNCSNYQAIKTKYESIDEMIDFADRYNISDLSKWEQKVRLIGYCMLIKRKVIDKIGLLDERFFPGNFED DDLGYRIQSEGYKLILCNDTFIHHFGSASFKENPEKFSKLLTENSKRFINKWGFDSEKNSFINFNIIEKINKVESNINVL HIGCGTGALLYKIKHVFKDAKLYGMDNSEITTKILKNFVNVKVSSIDDELYYPEDFFDYIIVTNSIEDSKAPRTALKNLL KFLKETGKIIITIKNSNFYAEFIKILMGSTDFKDKNLYNYNEIKEIFSSKEFLNANIQSQTVDITTENEMIMDHICKLTG ENMKSQYITKEYLITFNKNSIDKKEIKYILRRIENYIDIKDNLKILNNYLNKIDYKVLNEIIMKDIIRKEEVFNNIAINF YDNHKYERALEILELSYKYNPSYKDTVYNIAYIIYQLGDKKTALNYLELFSKNSYDEDILKLKKEILGDINE
Sequences:
>Translated_712_residues MEYINGYKIQATNNIQKLINEGKIKEAKSLIRKFEDSTKDDIDIISMKAVILIMDNKLEEAKQILKYAINLEKTNPDVLF NLAYIYEISGEYEKAYEYYSNAKNNSKDNEFISNTENIMNKLKENLNLQNNDEKIKTSIVILTYNKLEYTKLCIDSIRKY TKSGTYEIVVVDNNSTDDTREWLKEQKDIKVILNDENLGFPGGCNVGINAAEKENDILLLNNDTIVTPRWLENLKKCLYS DEHIGAVGAITNNCSNYQAIKTKYESIDEMIDFADRYNISDLSKWEQKVRLIGYCMLIKRKVIDKIGLLDERFFPGNFED DDLGYRIQSEGYKLILCNDTFIHHFGSASFKENPEKFSKLLTENSKRFINKWGFDSEKNSFINFNIIEKINKVESNINVL HIGCGTGALLYKIKHVFKDAKLYGMDNSEITTKILKNFVNVKVSSIDDELYYPEDFFDYIIVTNSIEDSKAPRTALKNLL KFLKETGKIIITIKNSNFYAEFIKILMGSTDFKDKNLYNYNEIKEIFSSKEFLNANIQSQTVDITTENEMIMDHICKLTG ENMKSQYITKEYLITFNKNSIDKKEIKYILRRIENYIDIKDNLKILNNYLNKIDYKVLNEIIMKDIIRKEEVFNNIAINF YDNHKYERALEILELSYKYNPSYKDTVYNIAYIIYQLGDKKTALNYLELFSKNSYDEDILKLKKEILGDINE >Mature_712_residues MEYINGYKIQATNNIQKLINEGKIKEAKSLIRKFEDSTKDDIDIISMKAVILIMDNKLEEAKQILKYAINLEKTNPDVLF NLAYIYEISGEYEKAYEYYSNAKNNSKDNEFISNTENIMNKLKENLNLQNNDEKIKTSIVILTYNKLEYTKLCIDSIRKY TKSGTYEIVVVDNNSTDDTREWLKEQKDIKVILNDENLGFPGGCNVGINAAEKENDILLLNNDTIVTPRWLENLKKCLYS DEHIGAVGAITNNCSNYQAIKTKYESIDEMIDFADRYNISDLSKWEQKVRLIGYCMLIKRKVIDKIGLLDERFFPGNFED DDLGYRIQSEGYKLILCNDTFIHHFGSASFKENPEKFSKLLTENSKRFINKWGFDSEKNSFINFNIIEKINKVESNINVL HIGCGTGALLYKIKHVFKDAKLYGMDNSEITTKILKNFVNVKVSSIDDELYYPEDFFDYIIVTNSIEDSKAPRTALKNLL KFLKETGKIIITIKNSNFYAEFIKILMGSTDFKDKNLYNYNEIKEIFSSKEFLNANIQSQTVDITTENEMIMDHICKLTG ENMKSQYITKEYLITFNKNSIDKKEIKYILRRIENYIDIKDNLKILNNYLNKIDYKVLNEIIMKDIIRKEEVFNNIAINF YDNHKYERALEILELSYKYNPSYKDTVYNIAYIIYQLGDKKTALNYLELFSKNSYDEDILKLKKEILGDINE
Specific function: Unknown
COG id: COG1216
COG function: function code R; Predicted glycosyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83246; Mature: 83246
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYINGYKIQATNNIQKLINEGKIKEAKSLIRKFEDSTKDDIDIISMKAVILIMDNKLEE CCCCCCEEEEECCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCHHH AKQILKYAINLEKTNPDVLFNLAYIYEISGEYEKAYEYYSNAKNNSKDNEFISNTENIMN HHHHHHHHHCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHH KLKENLNLQNNDEKIKTSIVILTYNKLEYTKLCIDSIRKYTKSGTYEIVVVDNNSTDDTR HHHHHCCCCCCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHH EWLKEQKDIKVILNDENLGFPGGCNVGINAAEKENDILLLNNDTIVTPRWLENLKKCLYS HHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEECHHHHHHHHHHHCC DEHIGAVGAITNNCSNYQAIKTKYESIDEMIDFADRYNISDLSKWEQKVRLIGYCMLIKR CCCCCEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH KVIDKIGLLDERFFPGNFEDDDLGYRIQSEGYKLILCNDTFIHHFGSASFKENPEKFSKL HHHHHHCCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCHHHHHCCCCCCCCCHHHHHHH LTENSKRFINKWGFDSEKNSFINFNIIEKINKVESNINVLHIGCGTGALLYKIKHVFKDA HHCCHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCC KLYGMDNSEITTKILKNFVNVKVSSIDDELYYPEDFFDYIIVTNSIEDSKAPRTALKNLL CEECCCCHHHHHHHHHHHHCEEEECCCCCCCCCHHHHCEEEEECCCCCCCCHHHHHHHHH KFLKETGKIIITIKNSNFYAEFIKILMGSTDFKDKNLYNYNEIKEIFSSKEFLNANIQSQ HHHHCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHCCCCCCC TVDITTENEMIMDHICKLTGENMKSQYITKEYLITFNKNSIDKKEIKYILRRIENYIDIK EEEEECCCHHHHHHHHHHCCCCHHHHHCCEEHEEEECCCCCCHHHHHHHHHHHHHHHCCH DNLKILNNYLNKIDYKVLNEIIMKDIIRKEEVFNNIAINFYDNHKYERALEILELSYKYN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHCCCC PSYKDTVYNIAYIIYQLGDKKTALNYLELFSKNSYDEDILKLKKEILGDINE CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MEYINGYKIQATNNIQKLINEGKIKEAKSLIRKFEDSTKDDIDIISMKAVILIMDNKLEE CCCCCCEEEEECCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCHHH AKQILKYAINLEKTNPDVLFNLAYIYEISGEYEKAYEYYSNAKNNSKDNEFISNTENIMN HHHHHHHHHCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHH KLKENLNLQNNDEKIKTSIVILTYNKLEYTKLCIDSIRKYTKSGTYEIVVVDNNSTDDTR HHHHHCCCCCCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHH EWLKEQKDIKVILNDENLGFPGGCNVGINAAEKENDILLLNNDTIVTPRWLENLKKCLYS HHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEECHHHHHHHHHHHCC DEHIGAVGAITNNCSNYQAIKTKYESIDEMIDFADRYNISDLSKWEQKVRLIGYCMLIKR CCCCCEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH KVIDKIGLLDERFFPGNFEDDDLGYRIQSEGYKLILCNDTFIHHFGSASFKENPEKFSKL HHHHHHCCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCHHHHHCCCCCCCCCHHHHHHH LTENSKRFINKWGFDSEKNSFINFNIIEKINKVESNINVLHIGCGTGALLYKIKHVFKDA HHCCHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCC KLYGMDNSEITTKILKNFVNVKVSSIDDELYYPEDFFDYIIVTNSIEDSKAPRTALKNLL CEECCCCHHHHHHHHHHHHCEEEECCCCCCCCCHHHHCEEEEECCCCCCCCHHHHHHHHH KFLKETGKIIITIKNSNFYAEFIKILMGSTDFKDKNLYNYNEIKEIFSSKEFLNANIQSQ HHHHCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHCCCCCCC TVDITTENEMIMDHICKLTGENMKSQYITKEYLITFNKNSIDKKEIKYILRRIENYIDIK EEEEECCCHHHHHHHHHHCCCCHHHHHCCEEHEEEECCCCCCHHHHHHHHHHHHHHHCCH DNLKILNNYLNKIDYKVLNEIIMKDIIRKEEVFNNIAINFYDNHKYERALEILELSYKYN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHCCCC PSYKDTVYNIAYIIYQLGDKKTALNYLELFSKNSYDEDILKLKKEILGDINE CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA