Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170756027

Identifier: 170756027

GI number: 170756027

Start: 2896315

End: 2898453

Strand: Reverse

Name: 170756027

Synonym: CLD_1847

Alternate gene names: NA

Gene position: 2898453-2896315 (Counterclockwise)

Preceding gene: 170756924

Following gene: 170754997

Centisome position: 73.23

GC content: 22.39

Gene sequence:

>2139_bases
ATGGAATATATAAATGGATATAAAATTCAAGCAACGAATAATATACAAAAACTAATTAATGAAGGAAAAATAAAAGAAGC
AAAAAGTTTGATTCGAAAATTTGAAGACAGTACTAAAGATGACATAGATATAATATCTATGAAAGCTGTAATATTAATAA
TGGATAACAAATTAGAAGAGGCTAAACAAATATTAAAATATGCTATTAATTTAGAGAAAACTAACCCTGATGTTCTTTTT
AATTTAGCTTATATATACGAAATTAGTGGAGAATATGAAAAAGCTTATGAGTATTATTCAAATGCTAAAAATAATTCAAA
GGATAATGAATTTATATCTAATACAGAAAATATAATGAATAAATTAAAAGAAAATTTAAATTTGCAGAATAATGATGAGA
AAATAAAAACAAGCATAGTTATACTAACATATAATAAGTTAGAGTATACTAAATTATGTATAGATAGTATTAGAAAATAT
ACCAAATCTGGAACTTATGAAATTGTAGTAGTTGATAATAATTCTACTGATGATACAAGAGAATGGCTAAAAGAACAAAA
AGATATAAAGGTAATATTAAATGATGAAAATTTAGGTTTCCCTGGTGGGTGTAATGTAGGGATAAATGCGGCAGAAAAAG
AAAATGACATACTTTTATTAAATAATGATACTATAGTGACTCCAAGATGGTTAGAAAATCTTAAAAAATGTTTATATAGT
GATGAACATATAGGAGCAGTTGGTGCTATCACAAATAATTGTTCTAATTATCAAGCGATAAAAACTAAATATGAATCAAT
AGATGAAATGATAGATTTTGCGGATAGATATAATATATCTGATTTATCGAAATGGGAACAAAAAGTAAGATTGATAGGCT
ATTGTATGTTAATTAAAAGGAAAGTTATAGATAAGATAGGTTTATTAGATGAAAGATTTTTTCCAGGTAATTTTGAAGAT
GATGATTTAGGATATAGAATTCAATCAGAAGGATATAAATTAATACTTTGTAATGATACTTTTATCCATCATTTTGGAAG
TGCATCCTTTAAAGAAAATCCAGAAAAATTCAGTAAATTACTTACGGAAAATTCTAAAAGATTTATAAATAAATGGGGAT
TCGATTCTGAAAAAAATTCTTTTATAAACTTCAATATTATAGAAAAAATTAATAAGGTTGAATCAAATATCAATGTTCTA
CATATAGGATGTGGTACAGGAGCTCTTTTATATAAAATAAAACATGTATTTAAAGATGCAAAATTATATGGGATGGATAA
TAGTGAGATAACAACTAAAATATTAAAAAACTTTGTAAATGTAAAGGTATCAAGCATAGATGACGAACTTTATTATCCTG
AAGATTTTTTTGATTATATTATAGTTACTAATAGTATAGAAGATTCAAAAGCCCCTAGAACAGCATTAAAAAATTTATTG
AAATTTCTTAAAGAAACAGGAAAAATAATAATTACTATAAAAAACTCAAACTTTTATGCAGAATTTATTAAAATTCTGAT
GGGTAGTACGGACTTTAAAGATAAAAATTTATATAATTATAATGAGATTAAGGAGATTTTTTCTTCTAAAGAATTTTTAA
ATGCTAATATTCAAAGTCAAACTGTAGATATAACTACAGAGAATGAAATGATAATGGATCATATTTGTAAACTTACTGGA
GAAAATATGAAATCTCAGTATATAACTAAAGAATATTTAATAACATTTAATAAAAATTCTATAGATAAAAAAGAAATAAA
GTATATTTTAAGAAGAATAGAAAATTATATTGATATTAAAGATAATTTGAAGATATTAAATAATTATCTAAATAAAATAG
ACTATAAAGTATTAAATGAAATAATTATGAAAGATATAATAAGAAAAGAAGAAGTGTTTAATAATATTGCTATAAATTTT
TATGATAATCATAAATATGAAAGGGCATTAGAAATATTGGAATTATCATATAAATATAATCCTAGTTATAAAGATACAGT
TTATAATATCGCATATATAATATACCAATTAGGAGATAAGAAAACAGCCTTAAATTATTTGGAGTTATTTTCTAAAAATT
CTTATGATGAGGATATATTAAAATTAAAGAAAGAAATATTAGGTGATATAAATGAATGA

Upstream 100 bases:

>100_bases
ATAATAAAAGATGAAATATTACCATTAATGAAAGAATGGCAATTGATTATAGGAAGTAGTATAGTAGCATAATTGATAAA
GAATTTTACGGGGTGAAGTA

Downstream 100 bases:

>100_bases
TAAAAAAATATGTTTTATAACTTGTATAAATGATGATAGACAATATGAGGAATGCCTATTATATATAAATAATTTGAATA
TACCTAAAGGCTATGAAATA

Product: glycosyltransferase

Products: NA

Alternate protein names: Glycosyltransferase; Glycosyl Transferase Group 2 Family Protein; Glycosyl Transferase Group 2 Family; Glycosyl Transferase; Family 2 Glycosyl Transferase; Glycosyl Transferase Family 2 Protein; Glycosyl Transferase GT2 Family Protein; Glycosyl Transferase GT2 Family; Glycosyltransferase/Rhamnosyltransferase; Rhamnosyltransferase; Rhamnosyl Transferase Related Protein; Glycosly Transferase; Bifunctional SAM-Dependent Methyltransferase Type; TPR-Repeat-Containing Protein; Rhamnosyl Transferase RfbQ; Family 2 Glycosyltransferase; Capsule-Related Glycosyltransferase; B-Glycosyltransferase; Group 2 Family Glycosyltransferase; Methyltransferase FkbM Family; Glycosyl Transferase Group 1/2 Family Protein; Methyltransferase And Glycosyltransferase; FkbM Family Methyltransferase; DTDP-Rhamnosyl Transferase RfbF

Number of amino acids: Translated: 712; Mature: 712

Protein sequence:

>712_residues
MEYINGYKIQATNNIQKLINEGKIKEAKSLIRKFEDSTKDDIDIISMKAVILIMDNKLEEAKQILKYAINLEKTNPDVLF
NLAYIYEISGEYEKAYEYYSNAKNNSKDNEFISNTENIMNKLKENLNLQNNDEKIKTSIVILTYNKLEYTKLCIDSIRKY
TKSGTYEIVVVDNNSTDDTREWLKEQKDIKVILNDENLGFPGGCNVGINAAEKENDILLLNNDTIVTPRWLENLKKCLYS
DEHIGAVGAITNNCSNYQAIKTKYESIDEMIDFADRYNISDLSKWEQKVRLIGYCMLIKRKVIDKIGLLDERFFPGNFED
DDLGYRIQSEGYKLILCNDTFIHHFGSASFKENPEKFSKLLTENSKRFINKWGFDSEKNSFINFNIIEKINKVESNINVL
HIGCGTGALLYKIKHVFKDAKLYGMDNSEITTKILKNFVNVKVSSIDDELYYPEDFFDYIIVTNSIEDSKAPRTALKNLL
KFLKETGKIIITIKNSNFYAEFIKILMGSTDFKDKNLYNYNEIKEIFSSKEFLNANIQSQTVDITTENEMIMDHICKLTG
ENMKSQYITKEYLITFNKNSIDKKEIKYILRRIENYIDIKDNLKILNNYLNKIDYKVLNEIIMKDIIRKEEVFNNIAINF
YDNHKYERALEILELSYKYNPSYKDTVYNIAYIIYQLGDKKTALNYLELFSKNSYDEDILKLKKEILGDINE

Sequences:

>Translated_712_residues
MEYINGYKIQATNNIQKLINEGKIKEAKSLIRKFEDSTKDDIDIISMKAVILIMDNKLEEAKQILKYAINLEKTNPDVLF
NLAYIYEISGEYEKAYEYYSNAKNNSKDNEFISNTENIMNKLKENLNLQNNDEKIKTSIVILTYNKLEYTKLCIDSIRKY
TKSGTYEIVVVDNNSTDDTREWLKEQKDIKVILNDENLGFPGGCNVGINAAEKENDILLLNNDTIVTPRWLENLKKCLYS
DEHIGAVGAITNNCSNYQAIKTKYESIDEMIDFADRYNISDLSKWEQKVRLIGYCMLIKRKVIDKIGLLDERFFPGNFED
DDLGYRIQSEGYKLILCNDTFIHHFGSASFKENPEKFSKLLTENSKRFINKWGFDSEKNSFINFNIIEKINKVESNINVL
HIGCGTGALLYKIKHVFKDAKLYGMDNSEITTKILKNFVNVKVSSIDDELYYPEDFFDYIIVTNSIEDSKAPRTALKNLL
KFLKETGKIIITIKNSNFYAEFIKILMGSTDFKDKNLYNYNEIKEIFSSKEFLNANIQSQTVDITTENEMIMDHICKLTG
ENMKSQYITKEYLITFNKNSIDKKEIKYILRRIENYIDIKDNLKILNNYLNKIDYKVLNEIIMKDIIRKEEVFNNIAINF
YDNHKYERALEILELSYKYNPSYKDTVYNIAYIIYQLGDKKTALNYLELFSKNSYDEDILKLKKEILGDINE
>Mature_712_residues
MEYINGYKIQATNNIQKLINEGKIKEAKSLIRKFEDSTKDDIDIISMKAVILIMDNKLEEAKQILKYAINLEKTNPDVLF
NLAYIYEISGEYEKAYEYYSNAKNNSKDNEFISNTENIMNKLKENLNLQNNDEKIKTSIVILTYNKLEYTKLCIDSIRKY
TKSGTYEIVVVDNNSTDDTREWLKEQKDIKVILNDENLGFPGGCNVGINAAEKENDILLLNNDTIVTPRWLENLKKCLYS
DEHIGAVGAITNNCSNYQAIKTKYESIDEMIDFADRYNISDLSKWEQKVRLIGYCMLIKRKVIDKIGLLDERFFPGNFED
DDLGYRIQSEGYKLILCNDTFIHHFGSASFKENPEKFSKLLTENSKRFINKWGFDSEKNSFINFNIIEKINKVESNINVL
HIGCGTGALLYKIKHVFKDAKLYGMDNSEITTKILKNFVNVKVSSIDDELYYPEDFFDYIIVTNSIEDSKAPRTALKNLL
KFLKETGKIIITIKNSNFYAEFIKILMGSTDFKDKNLYNYNEIKEIFSSKEFLNANIQSQTVDITTENEMIMDHICKLTG
ENMKSQYITKEYLITFNKNSIDKKEIKYILRRIENYIDIKDNLKILNNYLNKIDYKVLNEIIMKDIIRKEEVFNNIAINF
YDNHKYERALEILELSYKYNPSYKDTVYNIAYIIYQLGDKKTALNYLELFSKNSYDEDILKLKKEILGDINE

Specific function: Unknown

COG id: COG1216

COG function: function code R; Predicted glycosyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 83246; Mature: 83246

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYINGYKIQATNNIQKLINEGKIKEAKSLIRKFEDSTKDDIDIISMKAVILIMDNKLEE
CCCCCCEEEEECCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCHHH
AKQILKYAINLEKTNPDVLFNLAYIYEISGEYEKAYEYYSNAKNNSKDNEFISNTENIMN
HHHHHHHHHCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
KLKENLNLQNNDEKIKTSIVILTYNKLEYTKLCIDSIRKYTKSGTYEIVVVDNNSTDDTR
HHHHHCCCCCCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHH
EWLKEQKDIKVILNDENLGFPGGCNVGINAAEKENDILLLNNDTIVTPRWLENLKKCLYS
HHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEECHHHHHHHHHHHCC
DEHIGAVGAITNNCSNYQAIKTKYESIDEMIDFADRYNISDLSKWEQKVRLIGYCMLIKR
CCCCCEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
KVIDKIGLLDERFFPGNFEDDDLGYRIQSEGYKLILCNDTFIHHFGSASFKENPEKFSKL
HHHHHHCCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCHHHHHCCCCCCCCCHHHHHHH
LTENSKRFINKWGFDSEKNSFINFNIIEKINKVESNINVLHIGCGTGALLYKIKHVFKDA
HHCCHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCC
KLYGMDNSEITTKILKNFVNVKVSSIDDELYYPEDFFDYIIVTNSIEDSKAPRTALKNLL
CEECCCCHHHHHHHHHHHHCEEEECCCCCCCCCHHHHCEEEEECCCCCCCCHHHHHHHHH
KFLKETGKIIITIKNSNFYAEFIKILMGSTDFKDKNLYNYNEIKEIFSSKEFLNANIQSQ
HHHHCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHCCCCCCC
TVDITTENEMIMDHICKLTGENMKSQYITKEYLITFNKNSIDKKEIKYILRRIENYIDIK
EEEEECCCHHHHHHHHHHCCCCHHHHHCCEEHEEEECCCCCCHHHHHHHHHHHHHHHCCH
DNLKILNNYLNKIDYKVLNEIIMKDIIRKEEVFNNIAINFYDNHKYERALEILELSYKYN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHCCCC
PSYKDTVYNIAYIIYQLGDKKTALNYLELFSKNSYDEDILKLKKEILGDINE
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEYINGYKIQATNNIQKLINEGKIKEAKSLIRKFEDSTKDDIDIISMKAVILIMDNKLEE
CCCCCCEEEEECCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCHHH
AKQILKYAINLEKTNPDVLFNLAYIYEISGEYEKAYEYYSNAKNNSKDNEFISNTENIMN
HHHHHHHHHCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
KLKENLNLQNNDEKIKTSIVILTYNKLEYTKLCIDSIRKYTKSGTYEIVVVDNNSTDDTR
HHHHHCCCCCCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHH
EWLKEQKDIKVILNDENLGFPGGCNVGINAAEKENDILLLNNDTIVTPRWLENLKKCLYS
HHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEECHHHHHHHHHHHCC
DEHIGAVGAITNNCSNYQAIKTKYESIDEMIDFADRYNISDLSKWEQKVRLIGYCMLIKR
CCCCCEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
KVIDKIGLLDERFFPGNFEDDDLGYRIQSEGYKLILCNDTFIHHFGSASFKENPEKFSKL
HHHHHHCCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCHHHHHCCCCCCCCCHHHHHHH
LTENSKRFINKWGFDSEKNSFINFNIIEKINKVESNINVLHIGCGTGALLYKIKHVFKDA
HHCCHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCC
KLYGMDNSEITTKILKNFVNVKVSSIDDELYYPEDFFDYIIVTNSIEDSKAPRTALKNLL
CEECCCCHHHHHHHHHHHHCEEEECCCCCCCCCHHHHCEEEEECCCCCCCCHHHHHHHHH
KFLKETGKIIITIKNSNFYAEFIKILMGSTDFKDKNLYNYNEIKEIFSSKEFLNANIQSQ
HHHHCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHCCCCCCC
TVDITTENEMIMDHICKLTGENMKSQYITKEYLITFNKNSIDKKEIKYILRRIENYIDIK
EEEEECCCHHHHHHHHHHCCCCHHHHHCCEEHEEEECCCCCCHHHHHHHHHHHHHHHCCH
DNLKILNNYLNKIDYKVLNEIIMKDIIRKEEVFNNIAINFYDNHKYERALEILELSYKYN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHCCCC
PSYKDTVYNIAYIIYQLGDKKTALNYLELFSKNSYDEDILKLKKEILGDINE
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA