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The map label for this gene is yibD [C]

Identifier: 170754997

GI number: 170754997

Start: 2893491

End: 2896322

Strand: Reverse

Name: yibD [C]

Synonym: CLD_1848

Alternate gene names: 170754997

Gene position: 2896322-2893491 (Counterclockwise)

Preceding gene: 170756027

Following gene: 170757000

Centisome position: 73.17

GC content: 26.69

Gene sequence:

>2832_bases
ATGAATGATAAAAAAATATGTTTTATAACTTGTATAAATGATGATAGACAATATGAGGAATGCCTATTATATATAAATAA
TTTGAATATACCTAAAGGCTATGAAATAGATACTATTTCTGTTAAAGAAGCTAAGAGTATGGCTGCTGGATATAATGCTG
CAATGCAAGATACAGATGCAAAGTATAAGGTATATTTACATCAGGATACATATGTAATAAATAAAAATTTTATATATGAT
ATGTTAGATGTATTTAATTCAGATAAAAAAATAGGAATGATTGGAGTAATAGGAGCAAAAACTATTCCCACTAATGGGGT
ATGGTTGGAATCAATACATAAGTATGGACAAGTTTATGAAAGTCGTACAGGAAATATGAAACTATTAGCCCTTAATGAGC
CTAAAAATGATTATGAAGAAGTAAAAGCTATTAACGGATTAATTATGGTTACACAATATGATATTTTATGGCGAGAGGAT
ATATTTGGTGGATGGAGTCTTTATGATTTGGCACAGAGTGTAGAGTTTACTTTGGCGGGATATAAAGTTGTTATTCCTAA
ACAAAATGATACATGGTGTGTTCATGAATGCGGAAATTCTAAAAATGATTATGACAAATATAAAAACAAATTTTTGGAAC
AATACTCAAAAAATATTTTCCCGTTGGTAAGTGTGCTTATACCAACTTATAATAGACCTGAATACTTTAAGGAAGCGTTA
GAAAGTGTAATAAATCAAACTTATAGAAATATAGAGATTATTATTGGTGATGATAGTACAAATGATGAAACAGAGAATCT
AATAAAAGAAAATTATTTAAATAATTATGATAATATAAAATATTATCATAATAAGAAAAATTTAGGTCAATTTGATAATG
ATTTAAAACTTTATGATATAGCGGAAGGACAATTTATCAATTTTTTAATGGATGATGATTTATTTAGGACAACTAAAATT
GAAAAGATGATGAATTATTTTATTCAAGATATAAATGATGAAATTTCTATAATTACCTCTCATAGAGCAGTTATAGATAG
TAACGGAATTGTAGGAGATGTTTTTGGAAATACAAACGATATATTTAAAAATAGTATAATAATTAGCGGTATCGAGTTGG
GTAATTTTATACTCAAAAATAATTTTAATTGTATTGGAGAGCCAACCACTGCTTTATTTAGGAAGAATAAATTAAATGAA
CCTTTTGGTGTGTATAATAACAGGAAGTATGGATGTAATGTAGATCAAGCATCTTGGTTTAATTTATTATCTAATGGTAA
GGCAGTCTTTATTAATGAAGTTTTAAGTTATTTTAGAATGCATGGTGGTCAACAATTAGCTTCAGATAAAATGAAGTTAT
TAGGTGCATTAGACTATGCTCATGAAGTTGTAACAGCTAAAGAAAAAGGATTTTTAATGGAAAATGAAGATTTTAATGCA
GCATTATCTTCTAGTTTAAAATATTGTAAAAGTGTAAGCGATTATTTTAATGAAATAGATGAGAAACAAGAATTTATAGA
AAAAATCCATGAACTTAAAGAAAAATGCGAAATATTAAAAGTAAAATTAAAGGAAATCAACTACATTCAAAATATTGTTG
AGAAAGGTTCTCTGGCAAGTTCTTGTGAAAAAAAACTTAAGAAATTAGCGCATATTAAAGATAGAAACATTAAAAATGCA
ATTATGAAAAGAAAAATTATGTTTTCATGCATAACAACATATCATATGTTTGTAGCTTACATTTTATCCAAAACTGTTTA
TAAGAATGATTATAAAATTATTTTAGTAGCTAGCGGACACAATGACTATGAAAAAATTTGCAAAAATATGGGTGACTTGA
ACATATGGGAGGAGGTTGTATTAATCAACGAAAAAAACGGTGATTTTAATTTTGTTAAAAATCAATTAGAAAGTGTAAAT
TTTAATGATGTTGACATATTGCATTATTTTTCATGGGGCTCCATTGCAAATTACGTCTTGTTGGAATTTGTTATGCCACA
CACGACAGTTAACTTAACAGATGAGGGGGTAATGACTTATATAATTAAAGAGTCTGTTCAGCAGTGGGCAGCGGACACTA
AATCAAGCAAGATGCCTCTTGATTTCAATAAAATATCAGAAATATGGTTGTTTGACAAGAGATTATTTATAAGTGATATA
GATATTCCACTTAGGGAAATTGAATTTAAAAAATATATTGATACTGATTTAAAATATGTTTTGCGTGATGAATTGAATTA
TATTTTTGACTATGAACATAAAAGAGATAAGTTTGATATTGTTTTTTTTGATCAATATTTAACTTTAAGCGGTCAAACCA
ACCTTTCTCAAGAAAAATATTTATTGATGAATATTGCGAGGTTAGCGAGGGGATTGAACCTTATTGTTAAAAAACATCCA
ACAGATAGTGTGGACAAATATAAAGGAATTGAAATAAGCAATATTCTAATGGATATGGTTCCGTGGGAAGTAATATGTTT
GAATTATTATATAGATAATGAATTGGATAATAGGATTTTTATGACGTATGCATCTACCGCCATTCTAACTAATATATTCT
TATTTGATAATTCGTCAAAAAACAACATATTTATATTCTTGTATGATATATTGAGCAATTTGACAGGTGAAAATGCAGGA
TATGAAAATTTTAATATTTTTTTAAATAGAATAAAAGATGTTTATGATGTAAGTTTTATTGTTCCGGAATCATTTTATGA
AGTAAAAAGATATTTTTCAGCTAATATTATGAAGGAGAAGAAAAATGAAAAATTATCATATGAAGAATTTATAAATGAAC
AAGAGCATATTATTAAGGCTTTACTAAAGTGA

Upstream 100 bases:

>100_bases
GGAGATAAGAAAACAGCCTTAAATTATTTGGAGTTATTTTCTAAAAATTCTTATGATGAGGATATATTAAAATTAAAGAA
AGAAATATTAGGTGATATAA

Downstream 100 bases:

>100_bases
ATTAATTAAAGATGGAGAATGAATATGAAAAATTTAGGTAATATTCTTGTATGCGAAAGTACAACCTTATTGGAAACTTT
AAATGCTATTAATCTTAATC

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 943; Mature: 943

Protein sequence:

>943_residues
MNDKKICFITCINDDRQYEECLLYINNLNIPKGYEIDTISVKEAKSMAAGYNAAMQDTDAKYKVYLHQDTYVINKNFIYD
MLDVFNSDKKIGMIGVIGAKTIPTNGVWLESIHKYGQVYESRTGNMKLLALNEPKNDYEEVKAINGLIMVTQYDILWRED
IFGGWSLYDLAQSVEFTLAGYKVVIPKQNDTWCVHECGNSKNDYDKYKNKFLEQYSKNIFPLVSVLIPTYNRPEYFKEAL
ESVINQTYRNIEIIIGDDSTNDETENLIKENYLNNYDNIKYYHNKKNLGQFDNDLKLYDIAEGQFINFLMDDDLFRTTKI
EKMMNYFIQDINDEISIITSHRAVIDSNGIVGDVFGNTNDIFKNSIIISGIELGNFILKNNFNCIGEPTTALFRKNKLNE
PFGVYNNRKYGCNVDQASWFNLLSNGKAVFINEVLSYFRMHGGQQLASDKMKLLGALDYAHEVVTAKEKGFLMENEDFNA
ALSSSLKYCKSVSDYFNEIDEKQEFIEKIHELKEKCEILKVKLKEINYIQNIVEKGSLASSCEKKLKKLAHIKDRNIKNA
IMKRKIMFSCITTYHMFVAYILSKTVYKNDYKIILVASGHNDYEKICKNMGDLNIWEEVVLINEKNGDFNFVKNQLESVN
FNDVDILHYFSWGSIANYVLLEFVMPHTTVNLTDEGVMTYIIKESVQQWAADTKSSKMPLDFNKISEIWLFDKRLFISDI
DIPLREIEFKKYIDTDLKYVLRDELNYIFDYEHKRDKFDIVFFDQYLTLSGQTNLSQEKYLLMNIARLARGLNLIVKKHP
TDSVDKYKGIEISNILMDMVPWEVICLNYYIDNELDNRIFMTYASTAILTNIFLFDNSSKNNIFIFLYDILSNLTGENAG
YENFNIFLNRIKDVYDVSFIVPESFYEVKRYFSANIMKEKKNEKLSYEEFINEQEHIIKALLK

Sequences:

>Translated_943_residues
MNDKKICFITCINDDRQYEECLLYINNLNIPKGYEIDTISVKEAKSMAAGYNAAMQDTDAKYKVYLHQDTYVINKNFIYD
MLDVFNSDKKIGMIGVIGAKTIPTNGVWLESIHKYGQVYESRTGNMKLLALNEPKNDYEEVKAINGLIMVTQYDILWRED
IFGGWSLYDLAQSVEFTLAGYKVVIPKQNDTWCVHECGNSKNDYDKYKNKFLEQYSKNIFPLVSVLIPTYNRPEYFKEAL
ESVINQTYRNIEIIIGDDSTNDETENLIKENYLNNYDNIKYYHNKKNLGQFDNDLKLYDIAEGQFINFLMDDDLFRTTKI
EKMMNYFIQDINDEISIITSHRAVIDSNGIVGDVFGNTNDIFKNSIIISGIELGNFILKNNFNCIGEPTTALFRKNKLNE
PFGVYNNRKYGCNVDQASWFNLLSNGKAVFINEVLSYFRMHGGQQLASDKMKLLGALDYAHEVVTAKEKGFLMENEDFNA
ALSSSLKYCKSVSDYFNEIDEKQEFIEKIHELKEKCEILKVKLKEINYIQNIVEKGSLASSCEKKLKKLAHIKDRNIKNA
IMKRKIMFSCITTYHMFVAYILSKTVYKNDYKIILVASGHNDYEKICKNMGDLNIWEEVVLINEKNGDFNFVKNQLESVN
FNDVDILHYFSWGSIANYVLLEFVMPHTTVNLTDEGVMTYIIKESVQQWAADTKSSKMPLDFNKISEIWLFDKRLFISDI
DIPLREIEFKKYIDTDLKYVLRDELNYIFDYEHKRDKFDIVFFDQYLTLSGQTNLSQEKYLLMNIARLARGLNLIVKKHP
TDSVDKYKGIEISNILMDMVPWEVICLNYYIDNELDNRIFMTYASTAILTNIFLFDNSSKNNIFIFLYDILSNLTGENAG
YENFNIFLNRIKDVYDVSFIVPESFYEVKRYFSANIMKEKKNEKLSYEEFINEQEHIIKALLK
>Mature_943_residues
MNDKKICFITCINDDRQYEECLLYINNLNIPKGYEIDTISVKEAKSMAAGYNAAMQDTDAKYKVYLHQDTYVINKNFIYD
MLDVFNSDKKIGMIGVIGAKTIPTNGVWLESIHKYGQVYESRTGNMKLLALNEPKNDYEEVKAINGLIMVTQYDILWRED
IFGGWSLYDLAQSVEFTLAGYKVVIPKQNDTWCVHECGNSKNDYDKYKNKFLEQYSKNIFPLVSVLIPTYNRPEYFKEAL
ESVINQTYRNIEIIIGDDSTNDETENLIKENYLNNYDNIKYYHNKKNLGQFDNDLKLYDIAEGQFINFLMDDDLFRTTKI
EKMMNYFIQDINDEISIITSHRAVIDSNGIVGDVFGNTNDIFKNSIIISGIELGNFILKNNFNCIGEPTTALFRKNKLNE
PFGVYNNRKYGCNVDQASWFNLLSNGKAVFINEVLSYFRMHGGQQLASDKMKLLGALDYAHEVVTAKEKGFLMENEDFNA
ALSSSLKYCKSVSDYFNEIDEKQEFIEKIHELKEKCEILKVKLKEINYIQNIVEKGSLASSCEKKLKKLAHIKDRNIKNA
IMKRKIMFSCITTYHMFVAYILSKTVYKNDYKIILVASGHNDYEKICKNMGDLNIWEEVVLINEKNGDFNFVKNQLESVN
FNDVDILHYFSWGSIANYVLLEFVMPHTTVNLTDEGVMTYIIKESVQQWAADTKSSKMPLDFNKISEIWLFDKRLFISDI
DIPLREIEFKKYIDTDLKYVLRDELNYIFDYEHKRDKFDIVFFDQYLTLSGQTNLSQEKYLLMNIARLARGLNLIVKKHP
TDSVDKYKGIEISNILMDMVPWEVICLNYYIDNELDNRIFMTYASTAILTNIFLFDNSSKNNIFIFLYDILSNLTGENAG
YENFNIFLNRIKDVYDVSFIVPESFYEVKRYFSANIMKEKKNEKLSYEEFINEQEHIIKALLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 110080; Mature: 110080

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDKKICFITCINDDRQYEECLLYINNLNIPKGYEIDTISVKEAKSMAAGYNAAMQDTDA
CCCCEEEEEEEECCCCCHHHHHEEEECCCCCCCCCEEEEEHHHHHHHHHCCCCHHCCCCC
KYKVYLHQDTYVINKNFIYDMLDVFNSDKKIGMIGVIGAKTIPTNGVWLESIHKYGQVYE
EEEEEEECCEEEEECHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHH
SRTGNMKLLALNEPKNDYEEVKAINGLIMVTQYDILWREDIFGGWSLYDLAQSVEFTLAG
CCCCCEEEEEECCCCCHHHHHHHHCCEEEEEEEEEEEHHHCCCCCHHHHHHHHHEEEEEC
YKVVIPKQNDTWCVHECGNSKNDYDKYKNKFLEQYSKNIFPLVSVLIPTYNRPEYFKEAL
EEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHH
ESVINQTYRNIEIIIGDDSTNDETENLIKENYLNNYDNIKYYHNKKNLGQFDNDLKLYDI
HHHHHHHHCEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCEEEEE
AEGQFINFLMDDDLFRTTKIEKMMNYFIQDINDEISIITSHRAVIDSNGIVGDVFGNTND
CCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEECCCCEEEECCCCCH
IFKNSIIISGIELGNFILKNNFNCIGEPTTALFRKNKLNEPFGVYNNRKYGCNVDQASWF
HHHCCEEEEEEHHCCEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH
NLLSNGKAVFINEVLSYFRMHGGQQLASDKMKLLGALDYAHEVVTAKEKGFLMENEDFNA
HHHCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHH
ALSSSLKYCKSVSDYFNEIDEKQEFIEKIHELKEKCEILKVKLKEINYIQNIVEKGSLAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
SCEKKLKKLAHIKDRNIKNAIMKRKIMFSCITTYHMFVAYILSKTVYKNDYKIILVASGH
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCC
NDYEKICKNMGDLNIWEEVVLINEKNGDFNFVKNQLESVNFNDVDILHYFSWGSIANYVL
CHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHH
LEFVMPHTTVNLTDEGVMTYIIKESVQQWAADTKSSKMPLDFNKISEIWLFDKRLFISDI
HHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEEECEEEEECC
DIPLREIEFKKYIDTDLKYVLRDELNYIFDYEHKRDKFDIVFFDQYLTLSGQTNLSQEKY
CCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEEEEEEEEECCCCCCCCHHH
LLMNIARLARGLNLIVKKHPTDSVDKYKGIEISNILMDMVPWEVICLNYYIDNELDNRIF
HHHHHHHHHCCCEEEEECCCCCCHHHHCCCCHHHHHHHHCCCEEEEEEEEECCCCCCEEE
MTYASTAILTNIFLFDNSSKNNIFIFLYDILSNLTGENAGYENFNIFLNRIKDVYDVSFI
EEEHHHHHHHEEEEEECCCCCCEEEEHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHEEEE
VPESFYEVKRYFSANIMKEKKNEKLSYEEFINEQEHIIKALLK
CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHC
>Mature Secondary Structure
MNDKKICFITCINDDRQYEECLLYINNLNIPKGYEIDTISVKEAKSMAAGYNAAMQDTDA
CCCCEEEEEEEECCCCCHHHHHEEEECCCCCCCCCEEEEEHHHHHHHHHCCCCHHCCCCC
KYKVYLHQDTYVINKNFIYDMLDVFNSDKKIGMIGVIGAKTIPTNGVWLESIHKYGQVYE
EEEEEEECCEEEEECHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHH
SRTGNMKLLALNEPKNDYEEVKAINGLIMVTQYDILWREDIFGGWSLYDLAQSVEFTLAG
CCCCCEEEEEECCCCCHHHHHHHHCCEEEEEEEEEEEHHHCCCCCHHHHHHHHHEEEEEC
YKVVIPKQNDTWCVHECGNSKNDYDKYKNKFLEQYSKNIFPLVSVLIPTYNRPEYFKEAL
EEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHH
ESVINQTYRNIEIIIGDDSTNDETENLIKENYLNNYDNIKYYHNKKNLGQFDNDLKLYDI
HHHHHHHHCEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCEEEEE
AEGQFINFLMDDDLFRTTKIEKMMNYFIQDINDEISIITSHRAVIDSNGIVGDVFGNTND
CCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEECCCCEEEECCCCCH
IFKNSIIISGIELGNFILKNNFNCIGEPTTALFRKNKLNEPFGVYNNRKYGCNVDQASWF
HHHCCEEEEEEHHCCEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH
NLLSNGKAVFINEVLSYFRMHGGQQLASDKMKLLGALDYAHEVVTAKEKGFLMENEDFNA
HHHCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHH
ALSSSLKYCKSVSDYFNEIDEKQEFIEKIHELKEKCEILKVKLKEINYIQNIVEKGSLAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
SCEKKLKKLAHIKDRNIKNAIMKRKIMFSCITTYHMFVAYILSKTVYKNDYKIILVASGH
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCC
NDYEKICKNMGDLNIWEEVVLINEKNGDFNFVKNQLESVNFNDVDILHYFSWGSIANYVL
CHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHH
LEFVMPHTTVNLTDEGVMTYIIKESVQQWAADTKSSKMPLDFNKISEIWLFDKRLFISDI
HHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEEECEEEEECC
DIPLREIEFKKYIDTDLKYVLRDELNYIFDYEHKRDKFDIVFFDQYLTLSGQTNLSQEKY
CCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEEEEEEEEECCCCCCCCHHH
LLMNIARLARGLNLIVKKHPTDSVDKYKGIEISNILMDMVPWEVICLNYYIDNELDNRIF
HHHHHHHHHCCCEEEEECCCCCCHHHHCCCCHHHHHHHHCCCEEEEEEEEECCCCCCEEE
MTYASTAILTNIFLFDNSSKNNIFIFLYDILSNLTGENAGYENFNIFLNRIKDVYDVSFI
EEEHHHHHHHEEEEEECCCCCCEEEEHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHEEEE
VPESFYEVKRYFSANIMKEKKNEKLSYEEFINEQEHIIKALLK
CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]