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The map label for this gene is yrkC [H]

Identifier: 170756004

GI number: 170756004

Start: 299567

End: 300223

Strand: Direct

Name: yrkC [H]

Synonym: CLD_0525

Alternate gene names: 170756004

Gene position: 299567-300223 (Clockwise)

Preceding gene: 170756577

Following gene: 170754977

Centisome position: 7.57

GC content: 35.46

Gene sequence:

>657_bases
ATGTATAATACTTATATGATGTATACATGTCCTTATTGTGCTAACATACCAATGTACAACTCATATGACATGTATAGTCC
TTATGATACTTATTCATGTCCTTGTTTCGTTGACACACCAAGTTATAATGATTCAGATTTTTCCATGCAGCGTAATAACA
GGTATATTCCTTTTACTGATGAATTCGAGTATGGTTCAAGATTTGGTTCTCCACAATTAGCAAATAGCAATAGGCCAATT
GAGCTAAAAGATTATGGTCCACAACCATTCGTAGTTAACATCAATGAAGCTACTAAGAGAAATAATACTTTTCGTACCGC
TTTATGGACAGGAACACATCTACAAGTTACCTTAATGAGCATCAATGTTGGTGATGATATAGGTTTAGAAATGCATCCGA
ATGTTGATCAGTTTATACGTATTGAAGAAGGTCAAGGACTTGTTAAAATGGGAAGTAATAAGGATAGGTTGAATTTTCGA
GCAAAAGCCTATGATGATTTTGCAATCATGATACCTGCTGGTACATGGCACAATATTATCAATACGGGTAATAAACCACT
TAAAGTATATTCTATCTATGCACCTCCTCAACATCCACATGGTACAGTTCATGTAACCAAAGCAGATGCAGAAGCTGCTG
AAGAGAGCCACCACTAA

Upstream 100 bases:

>100_bases
GTATTGTTGGGAATAGGAGTTTAGCTATAATCAATACAAGCACATTTCTAAAATTTAGAGCATATTATAATTTTATAAGA
TTATAAAAGGAGAGAAATAT

Downstream 100 bases:

>100_bases
TTAAGATCAACTATATACAATCACAAAGATAATTTGCGTAAATTTTATTATTGTTTAAAAAATTATTATGTATGTGTGCG
CAAATACATGATTTAGTACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MYNTYMMYTCPYCANIPMYNSYDMYSPYDTYSCPCFVDTPSYNDSDFSMQRNNRYIPFTDEFEYGSRFGSPQLANSNRPI
ELKDYGPQPFVVNINEATKRNNTFRTALWTGTHLQVTLMSINVGDDIGLEMHPNVDQFIRIEEGQGLVKMGSNKDRLNFR
AKAYDDFAIMIPAGTWHNIINTGNKPLKVYSIYAPPQHPHGTVHVTKADAEAAEESHH

Sequences:

>Translated_218_residues
MYNTYMMYTCPYCANIPMYNSYDMYSPYDTYSCPCFVDTPSYNDSDFSMQRNNRYIPFTDEFEYGSRFGSPQLANSNRPI
ELKDYGPQPFVVNINEATKRNNTFRTALWTGTHLQVTLMSINVGDDIGLEMHPNVDQFIRIEEGQGLVKMGSNKDRLNFR
AKAYDDFAIMIPAGTWHNIINTGNKPLKVYSIYAPPQHPHGTVHVTKADAEAAEESHH
>Mature_218_residues
MYNTYMMYTCPYCANIPMYNSYDMYSPYDTYSCPCFVDTPSYNDSDFSMQRNNRYIPFTDEFEYGSRFGSPQLANSNRPI
ELKDYGPQPFVVNINEATKRNNTFRTALWTGTHLQVTLMSINVGDDIGLEMHPNVDQFIRIEEGQGLVKMGSNKDRLNFR
AKAYDDFAIMIPAGTWHNIINTGNKPLKVYSIYAPPQHPHGTVHVTKADAEAAEESHH

Specific function: Unknown

COG id: COG0662

COG function: function code G; Mannose-6-phosphate isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013096
- InterPro:   IPR011051
- InterPro:   IPR014710 [H]

Pfam domain/function: PF07883 Cupin_2 [H]

EC number: NA

Molecular weight: Translated: 24985; Mature: 24985

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYNTYMMYTCPYCANIPMYNSYDMYSPYDTYSCPCFVDTPSYNDSDFSMQRNNRYIPFTD
CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEECCCEECCCCC
EFEYGSRFGSPQLANSNRPIELKDYGPQPFVVNINEATKRNNTFRTALWTGTHLQVTLMS
CCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEECCHHHCCCCEEEEEEEECCEEEEEEEE
INVGDDIGLEMHPNVDQFIRIEEGQGLVKMGSNKDRLNFRAKAYDDFAIMIPAGTWHNII
EECCCCCCEEECCCHHHEEEEECCCCEEEECCCCCCEEEEEEEECCEEEEEECCCHHHHH
NTGNKPLKVYSIYAPPQHPHGTVHVTKADAEAAEESHH
HCCCCCEEEEEEECCCCCCCCEEEEEECCCHHHHHCCC
>Mature Secondary Structure
MYNTYMMYTCPYCANIPMYNSYDMYSPYDTYSCPCFVDTPSYNDSDFSMQRNNRYIPFTD
CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEECCCEECCCCC
EFEYGSRFGSPQLANSNRPIELKDYGPQPFVVNINEATKRNNTFRTALWTGTHLQVTLMS
CCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEECCHHHCCCCEEEEEEEECCEEEEEEEE
INVGDDIGLEMHPNVDQFIRIEEGQGLVKMGSNKDRLNFRAKAYDDFAIMIPAGTWHNII
EECCCCCCEEECCCHHHEEEEECCCCEEEECCCCCCEEEEEEEECCEEEEEECCCHHHHH
NTGNKPLKVYSIYAPPQHPHGTVHVTKADAEAAEESHH
HCCCCCEEEEEEECCCCCCCCEEEEEECCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]