Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

Click here to switch to the map view.

The map label for this gene is 170755922

Identifier: 170755922

GI number: 170755922

Start: 301902

End: 304538

Strand: Direct

Name: 170755922

Synonym: CLD_0522

Alternate gene names: NA

Gene position: 301902-304538 (Clockwise)

Preceding gene: 170756715

Following gene: 170755065

Centisome position: 7.63

GC content: 24.61

Gene sequence:

>2637_bases
ATGGCTAAAGGTGGTAAAATAAAAATAAAGAATTATAGAGAATTTGAGAGGGGAGCAGTTATGGATGAAAAAGGATTTGA
ACTACAATCAGATGAGATAGAATTAATATTAAAGAATCATCTTAAAATAGAATCAAAGGTAATGTCTATAGAAACATTAT
TAGGAAATGCTAGAATGAGAAATAAAATAGTTTATGATCCATATTATCAAAGAAATTATGTATGGGATAATGATAAAGCT
ACATATTTTATTGAAAGTATATTATTGGGAACGGAAATTCCACCTTTAGTTTTCTTTAAGACAGACCAAGGAAAAATTGA
AGTAATAGACGGAAGACAAAGATATGAAACATTAAGTAAGTTTTTAGGCAGCAATTTATCTTTAAGTAAAAAAGGGTTGA
CTAACTTAAAATCATTGCATAAGAAAAAATATGCTGATTTAGAACCTAAAATACAGGATATATATTTGGATACTAAAATA
AGAATAATAGAATTTAGTATAGTTAATGAACCTAAGTTAACTGATAGACAAGAAGATTTAATTAAGAAAGAGATATTTAG
ACGATATAATTCGGGAATAACACCACTAACAAGTGTTGATATTAATAGAGCTATGTATAACAATGACAATATCACCAATT
TTTTTAAGACCAAAATAAGAGATGATGAAGCATTATACCAAGAATTAATAGGATTGTTTTTTAATTCAAATAGTAATAGA
AAAGTATCGGTAGATACTATAATGCATAAAATAAGACAGATTTTAGTTTTACATAAGATTCCAGTTAAGTATTATTCAAG
GTCAAGTAATAGACAATTTGTAATAGAAAGTTTTTATGAAATACTTATGAATGAAACTGAAGATCCATCAATAATATATA
ATGATTTTATACGAAAAATAGAATTATTAATAAAATTAAAGGGAATATTTTGCAAGTATGAAATTGAGTATAATAAACTT
ATATCTGAGTGTTTAATTTGGGCATTATATATATGTGATGTAGAAAATATAGATATTCCTCAATTTGAAGCAGAAGAACC
ATTTTATAATGACTTACTAATATATGTTAAACAAGATTTGGATAAATTCTCTAATTTGGAAAGTCATTTTTATAAGAGTT
ATGAGCCAAGATATGAATATATATTAAAATTTGTAGAGAATAAATTCAATAAGAATCTAGTGGATACGTATATAACAAGT
CATAGAGATGTAGTTAAGAATAGACAAAAGATAGATTCTGATATAAACATAACAAAACAACTAGATGAATTAAAGGAGTT
AAGAATAGATAAGGCAGAGCCTTCAAGCACCACAATAGAAGATTTGAGTTCTCAAATGTTAAGAAAAAGATTTCTAGTAA
GACCTTCATATCAGAGAGAAGAAGTTATAAATTTAGTTAAATCATCATCTATAATAGAAAGTATTCTTTTGGATATAAAG
CTTCCTCCAATATTTATATTTAAAAGAAAGGATGGAGTAAGTGAAGTAATAGATGGACAACAAAGGTTATTAACAATACT
AGGATACATGGGAGAAGGATTTTGTGATGAAAGAGGAAATAGTATCTATTCTAAGAAAAATCAATTTAAATTAAAAGATT
TAAGAGTATTAGATGAATTAAATGGATTAAGATTTAATTCATTAGATTCTAAATTGCAGGATAAAATATATGATTTTAAC
TTGTCAGTAGTAACAATAGATGAAGAAAGAAATCCTAACTTCAATCCAATAGATTTATTTATAAGATTAAATAATAAACC
CTATCCTGTAAGAGAAAATACATTTGAAATGTGGAATTCTTATATTGATAAAGAAATAATAACTAAAATAAGAACTAATG
TAAAGAAAAACGAAGAGTGGATGTACTTTAGAAAAAATAATAGTAGAATGATAAATGAAGAAATGTATACAATATTATCA
TATTTAAGTTATAAGAATAATTATGAAAATATTAAAGAAAAAGATATATTTGATATTTACCAAAAGGGTCAAAGAATTAA
TTTCAGGATACAGAATAAAAAGGACTTAACAAGAATTTTAGAATCAGCTTCAAAAGATAATGGCAGTAAGAAGCATTTTT
TAGCTAGTATAAGAAATGTTGAATCATTTATTAAAAAATTAAGATTAATTTTGGTAACAGAAAATATAAGTAATGATACT
ATTAATGAGTATCTTAAAAATGAGTTGAATCTAATTTTTAAGGTAAAAGCTAATTCTACAAGAAGAAGTTTACAAGATTT
CTATGCATTATGGTATATTATACAGCCATTAAATATAGAGATGATAAGAAGAAATAGGGAAGTAATAAAAGAAGAATTAC
AAATTATTTTTACTTTTATGAAAGAAATTCCCGAAAATTCATTAAGTGATTTTCTAAATAGAGTTAATGAATTCAATGAA
AAATATAAAATAAACCAAAGAAAACTAAAACTTCCGGTGGATAAAGTTGAGGAAATAATTAAAAGGCAAAATTTCATATG
TCCAATATGTAAGGAAAAATTGTATATTGGAGATATTACTAATAATGATCATATTGTTGCACTTGCAATAGGTGGAGATG
ATGAAATCGAAAATATACAAGTTACTCATGAAAGCTGTAATCATGAAAAAGGATGTAAACAATTAGAATTGATTTAG

Upstream 100 bases:

>100_bases
GGATTTCAAAGGTCACACTTCGCCTCTACCATGAAAACCTCGGCAATACAGAAATGTATTGCTGAGTTTTTTGTTTTTTA
TCAAATTTATAATTACATAA

Downstream 100 bases:

>100_bases
TTAATATACTTTATTATATGATAGTTTCTTTTCTAAAATAAGGGTAAGTTATAGACATACATTATTATATTAAAACAATA
CCTATACTAGATAATATATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 878; Mature: 877

Protein sequence:

>878_residues
MAKGGKIKIKNYREFERGAVMDEKGFELQSDEIELILKNHLKIESKVMSIETLLGNARMRNKIVYDPYYQRNYVWDNDKA
TYFIESILLGTEIPPLVFFKTDQGKIEVIDGRQRYETLSKFLGSNLSLSKKGLTNLKSLHKKKYADLEPKIQDIYLDTKI
RIIEFSIVNEPKLTDRQEDLIKKEIFRRYNSGITPLTSVDINRAMYNNDNITNFFKTKIRDDEALYQELIGLFFNSNSNR
KVSVDTIMHKIRQILVLHKIPVKYYSRSSNRQFVIESFYEILMNETEDPSIIYNDFIRKIELLIKLKGIFCKYEIEYNKL
ISECLIWALYICDVENIDIPQFEAEEPFYNDLLIYVKQDLDKFSNLESHFYKSYEPRYEYILKFVENKFNKNLVDTYITS
HRDVVKNRQKIDSDINITKQLDELKELRIDKAEPSSTTIEDLSSQMLRKRFLVRPSYQREEVINLVKSSSIIESILLDIK
LPPIFIFKRKDGVSEVIDGQQRLLTILGYMGEGFCDERGNSIYSKKNQFKLKDLRVLDELNGLRFNSLDSKLQDKIYDFN
LSVVTIDEERNPNFNPIDLFIRLNNKPYPVRENTFEMWNSYIDKEIITKIRTNVKKNEEWMYFRKNNSRMINEEMYTILS
YLSYKNNYENIKEKDIFDIYQKGQRINFRIQNKKDLTRILESASKDNGSKKHFLASIRNVESFIKKLRLILVTENISNDT
INEYLKNELNLIFKVKANSTRRSLQDFYALWYIIQPLNIEMIRRNREVIKEELQIIFTFMKEIPENSLSDFLNRVNEFNE
KYKINQRKLKLPVDKVEEIIKRQNFICPICKEKLYIGDITNNDHIVALAIGGDDEIENIQVTHESCNHEKGCKQLELI

Sequences:

>Translated_878_residues
MAKGGKIKIKNYREFERGAVMDEKGFELQSDEIELILKNHLKIESKVMSIETLLGNARMRNKIVYDPYYQRNYVWDNDKA
TYFIESILLGTEIPPLVFFKTDQGKIEVIDGRQRYETLSKFLGSNLSLSKKGLTNLKSLHKKKYADLEPKIQDIYLDTKI
RIIEFSIVNEPKLTDRQEDLIKKEIFRRYNSGITPLTSVDINRAMYNNDNITNFFKTKIRDDEALYQELIGLFFNSNSNR
KVSVDTIMHKIRQILVLHKIPVKYYSRSSNRQFVIESFYEILMNETEDPSIIYNDFIRKIELLIKLKGIFCKYEIEYNKL
ISECLIWALYICDVENIDIPQFEAEEPFYNDLLIYVKQDLDKFSNLESHFYKSYEPRYEYILKFVENKFNKNLVDTYITS
HRDVVKNRQKIDSDINITKQLDELKELRIDKAEPSSTTIEDLSSQMLRKRFLVRPSYQREEVINLVKSSSIIESILLDIK
LPPIFIFKRKDGVSEVIDGQQRLLTILGYMGEGFCDERGNSIYSKKNQFKLKDLRVLDELNGLRFNSLDSKLQDKIYDFN
LSVVTIDEERNPNFNPIDLFIRLNNKPYPVRENTFEMWNSYIDKEIITKIRTNVKKNEEWMYFRKNNSRMINEEMYTILS
YLSYKNNYENIKEKDIFDIYQKGQRINFRIQNKKDLTRILESASKDNGSKKHFLASIRNVESFIKKLRLILVTENISNDT
INEYLKNELNLIFKVKANSTRRSLQDFYALWYIIQPLNIEMIRRNREVIKEELQIIFTFMKEIPENSLSDFLNRVNEFNE
KYKINQRKLKLPVDKVEEIIKRQNFICPICKEKLYIGDITNNDHIVALAIGGDDEIENIQVTHESCNHEKGCKQLELI
>Mature_877_residues
AKGGKIKIKNYREFERGAVMDEKGFELQSDEIELILKNHLKIESKVMSIETLLGNARMRNKIVYDPYYQRNYVWDNDKAT
YFIESILLGTEIPPLVFFKTDQGKIEVIDGRQRYETLSKFLGSNLSLSKKGLTNLKSLHKKKYADLEPKIQDIYLDTKIR
IIEFSIVNEPKLTDRQEDLIKKEIFRRYNSGITPLTSVDINRAMYNNDNITNFFKTKIRDDEALYQELIGLFFNSNSNRK
VSVDTIMHKIRQILVLHKIPVKYYSRSSNRQFVIESFYEILMNETEDPSIIYNDFIRKIELLIKLKGIFCKYEIEYNKLI
SECLIWALYICDVENIDIPQFEAEEPFYNDLLIYVKQDLDKFSNLESHFYKSYEPRYEYILKFVENKFNKNLVDTYITSH
RDVVKNRQKIDSDINITKQLDELKELRIDKAEPSSTTIEDLSSQMLRKRFLVRPSYQREEVINLVKSSSIIESILLDIKL
PPIFIFKRKDGVSEVIDGQQRLLTILGYMGEGFCDERGNSIYSKKNQFKLKDLRVLDELNGLRFNSLDSKLQDKIYDFNL
SVVTIDEERNPNFNPIDLFIRLNNKPYPVRENTFEMWNSYIDKEIITKIRTNVKKNEEWMYFRKNNSRMINEEMYTILSY
LSYKNNYENIKEKDIFDIYQKGQRINFRIQNKKDLTRILESASKDNGSKKHFLASIRNVESFIKKLRLILVTENISNDTI
NEYLKNELNLIFKVKANSTRRSLQDFYALWYIIQPLNIEMIRRNREVIKEELQIIFTFMKEIPENSLSDFLNRVNEFNEK
YKINQRKLKLPVDKVEEIIKRQNFICPICKEKLYIGDITNNDHIVALAIGGDDEIENIQVTHESCNHEKGCKQLELI

Specific function: Unknown

COG id: COG1479

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 104277; Mature: 104146

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKGGKIKIKNYREFERGAVMDEKGFELQSDEIELILKNHLKIESKVMSIETLLGNARMR
CCCCCCEEECCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHC
NKIVYDPYYQRNYVWDNDKATYFIESILLGTEIPPLVFFKTDQGKIEVIDGRQRYETLSK
CCEEECCCCCCCEEECCCCHHHHHHHHHHCCCCCCEEEEECCCCCEEEECCHHHHHHHHH
FLGSNLSLSKKGLTNLKSLHKKKYADLEPKIQDIYLDTKIRIIEFSIVNEPKLTDRQEDL
HHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHEEEECCEEEEEEEEECCCCCCCCHHHHH
IKKEIFRRYNSGITPLTSVDINRAMYNNDNITNFFKTKIRDDEALYQELIGLFFNSNSNR
HHHHHHHHHCCCCCCEEECCCHHHEECCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCC
KVSVDTIMHKIRQILVLHKIPVKYYSRSSNRQFVIESFYEILMNETEDPSIIYNDFIRKI
EEEHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH
ELLIKLKGIFCKYEIEYNKLISECLIWALYICDVENIDIPQFEAEEPFYNDLLIYVKQDL
HHHHHHCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH
DKFSNLESHFYKSYEPRYEYILKFVENKFNKNLVDTYITSHRDVVKNRQKIDSDINITKQ
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
LDELKELRIDKAEPSSTTIEDLSSQMLRKRFLVRPSYQREEVINLVKSSSIIESILLDIK
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC
LPPIFIFKRKDGVSEVIDGQQRLLTILGYMGEGFCDERGNSIYSKKNQFKLKDLRVLDEL
CCCEEEEECCCCHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
NGLRFNSLDSKLQDKIYDFNLSVVTIDEERNPNFNPIDLFIRLNNKPYPVRENTFEMWNS
CCCEECCHHHHHHHHHEEECEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHH
YIDKEIITKIRTNVKKNEEWMYFRKNNSRMINEEMYTILSYLSYKNNYENIKEKDIFDIY
HHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
QKGQRINFRIQNKKDLTRILESASKDNGSKKHFLASIRNVESFIKKLRLILVTENISNDT
HCCCEEEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCHH
INEYLKNELNLIFKVKANSTRRSLQDFYALWYIIQPLNIEMIRRNREVIKEELQIIFTFM
HHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
KEIPENSLSDFLNRVNEFNEKYKINQRKLKLPVDKVEEIIKRQNFICPICKEKLYIGDIT
HHCCCHHHHHHHHHHHHHHHHHCCCCHHEECCHHHHHHHHHHCCCCCCHHCCCEEEEEEC
NNDHIVALAIGGDDEIENIQVTHESCNHEKGCKQLELI
CCCEEEEEEECCCCCCCCEEEEHHHCCCHHCCHHCCCC
>Mature Secondary Structure 
AKGGKIKIKNYREFERGAVMDEKGFELQSDEIELILKNHLKIESKVMSIETLLGNARMR
CCCCCEEECCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHC
NKIVYDPYYQRNYVWDNDKATYFIESILLGTEIPPLVFFKTDQGKIEVIDGRQRYETLSK
CCEEECCCCCCCEEECCCCHHHHHHHHHHCCCCCCEEEEECCCCCEEEECCHHHHHHHHH
FLGSNLSLSKKGLTNLKSLHKKKYADLEPKIQDIYLDTKIRIIEFSIVNEPKLTDRQEDL
HHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHEEEECCEEEEEEEEECCCCCCCCHHHHH
IKKEIFRRYNSGITPLTSVDINRAMYNNDNITNFFKTKIRDDEALYQELIGLFFNSNSNR
HHHHHHHHHCCCCCCEEECCCHHHEECCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCC
KVSVDTIMHKIRQILVLHKIPVKYYSRSSNRQFVIESFYEILMNETEDPSIIYNDFIRKI
EEEHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH
ELLIKLKGIFCKYEIEYNKLISECLIWALYICDVENIDIPQFEAEEPFYNDLLIYVKQDL
HHHHHHCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH
DKFSNLESHFYKSYEPRYEYILKFVENKFNKNLVDTYITSHRDVVKNRQKIDSDINITKQ
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
LDELKELRIDKAEPSSTTIEDLSSQMLRKRFLVRPSYQREEVINLVKSSSIIESILLDIK
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC
LPPIFIFKRKDGVSEVIDGQQRLLTILGYMGEGFCDERGNSIYSKKNQFKLKDLRVLDEL
CCCEEEEECCCCHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
NGLRFNSLDSKLQDKIYDFNLSVVTIDEERNPNFNPIDLFIRLNNKPYPVRENTFEMWNS
CCCEECCHHHHHHHHHEEECEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHH
YIDKEIITKIRTNVKKNEEWMYFRKNNSRMINEEMYTILSYLSYKNNYENIKEKDIFDIY
HHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
QKGQRINFRIQNKKDLTRILESASKDNGSKKHFLASIRNVESFIKKLRLILVTENISNDT
HCCCEEEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCHH
INEYLKNELNLIFKVKANSTRRSLQDFYALWYIIQPLNIEMIRRNREVIKEELQIIFTFM
HHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
KEIPENSLSDFLNRVNEFNEKYKINQRKLKLPVDKVEEIIKRQNFICPICKEKLYIGDIT
HHCCCHHHHHHHHHHHHHHHHHCCCCHHEECCHHHHHHHHHHCCCCCCHHCCCEEEEEEC
NNDHIVALAIGGDDEIENIQVTHESCNHEKGCKQLELI
CCCEEEEEEECCCCCCCCEEEEHHHCCCHHCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA