| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755799
Identifier: 170755799
GI number: 170755799
Start: 2340963
End: 2341766
Strand: Reverse
Name: 170755799
Synonym: CLD_2428
Alternate gene names: NA
Gene position: 2341766-2340963 (Counterclockwise)
Preceding gene: 170756371
Following gene: 170754385
Centisome position: 59.16
GC content: 31.22
Gene sequence:
>804_bases GTGATTAAAGTTATAAAAATAAATGATAGTTTAAATGTAAGTTTTGATTATGATGCTGACATAGTATCTAAAGTTAAAAC AATACCAGGAAGAAAATACAATCCAAATAGTAAATCATGGGATATGCCACTTCAAGCTATTCATAAATTAAAAGAATTAT TCAATGACTTAGATATATCAGAAGATGTTGACCAAGACTATAAGGCTCCTAAATATGATTTTAATCAAGAATTAGAAAGC GTAAATTATAAACCATTAAAAATATTTGCAGAATGGTGCTTGAATCAATTACCAGATTATTTCTATGAAGTAGCAGCTAG CTCCACAGGAAAATATCATCCAGCTTATGCATTGGGTGAAGGTGGATTAGTAAGGCATACTATAGCAGCAGTAAGAATAG CAGAAGAGTTATTTAAATGTGAAACTATACAAGAATTTGAGTTTAGAGAAAAAAACATTATAAGAGTTGCTTTATTACTA CACGATGGGGTTAAACATGGACTTGATGGAAGTCAGTATACAGTAACTACACATCCTATAGAAGTTGTTAAATATTTAGA AGATAGATACTTTGAAGTATCAGAGGAAACACTTCCAGATGAAGTTATAGAGGTAATGGAATGTGATTTATGGGAAGATA TAGCGAGTTGTATTAAATCTCACATGGGGCAATGGAACACAGATTATAAAACAGGCGAAGAAATATTACCTAAGCCACAA ACTGAAATGCAAAAGTTTACTCACTTGTGTGATTACTTAGCTAGTAGAAAGATGTTAGAAGTTAATTTTAATGTGGAGGG GTAG
Upstream 100 bases:
>100_bases ACAGTTGATGGAGTAAACAAAGGAAGAATTAAGAATATAAACATGAGGGATCTTACTAAAGATATTAAAGTTCATTTCAT AAATGTAAGGGGGTATTTGG
Downstream 100 bases:
>100_bases AAATTATGGGGGATTTATTAAAAGCTTTAAATTTAATAAAAGAAACTTGTGATAAGCAAGAAGGTTGTAAAAAGTGTCCT TTAAGTAGTGAAGATATTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MIKVIKINDSLNVSFDYDADIVSKVKTIPGRKYNPNSKSWDMPLQAIHKLKELFNDLDISEDVDQDYKAPKYDFNQELES VNYKPLKIFAEWCLNQLPDYFYEVAASSTGKYHPAYALGEGGLVRHTIAAVRIAEELFKCETIQEFEFREKNIIRVALLL HDGVKHGLDGSQYTVTTHPIEVVKYLEDRYFEVSEETLPDEVIEVMECDLWEDIASCIKSHMGQWNTDYKTGEEILPKPQ TEMQKFTHLCDYLASRKMLEVNFNVEG
Sequences:
>Translated_267_residues MIKVIKINDSLNVSFDYDADIVSKVKTIPGRKYNPNSKSWDMPLQAIHKLKELFNDLDISEDVDQDYKAPKYDFNQELES VNYKPLKIFAEWCLNQLPDYFYEVAASSTGKYHPAYALGEGGLVRHTIAAVRIAEELFKCETIQEFEFREKNIIRVALLL HDGVKHGLDGSQYTVTTHPIEVVKYLEDRYFEVSEETLPDEVIEVMECDLWEDIASCIKSHMGQWNTDYKTGEEILPKPQ TEMQKFTHLCDYLASRKMLEVNFNVEG >Mature_267_residues MIKVIKINDSLNVSFDYDADIVSKVKTIPGRKYNPNSKSWDMPLQAIHKLKELFNDLDISEDVDQDYKAPKYDFNQELES VNYKPLKIFAEWCLNQLPDYFYEVAASSTGKYHPAYALGEGGLVRHTIAAVRIAEELFKCETIQEFEFREKNIIRVALLL HDGVKHGLDGSQYTVTTHPIEVVKYLEDRYFEVSEETLPDEVIEVMECDLWEDIASCIKSHMGQWNTDYKTGEEILPKPQ TEMQKFTHLCDYLASRKMLEVNFNVEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30936; Mature: 30936
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKVIKINDSLNVSFDYDADIVSKVKTIPGRKYNPNSKSWDMPLQAIHKLKELFNDLDIS CEEEEEECCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC EDVDQDYKAPKYDFNQELESVNYKPLKIFAEWCLNQLPDYFYEVAASSTGKYHPAYALGE CCCCHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECC GGLVRHTIAAVRIAEELFKCETIQEFEFREKNIIRVALLLHDGVKHGLDGSQYTVTTHPI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHH EVVKYLEDRYFEVSEETLPDEVIEVMECDLWEDIASCIKSHMGQWNTDYKTGEEILPKPQ HHHHHHHHHHHHCCHHCCHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCH TEMQKFTHLCDYLASRKMLEVNFNVEG HHHHHHHHHHHHHHCCCEEEEEEECCC >Mature Secondary Structure MIKVIKINDSLNVSFDYDADIVSKVKTIPGRKYNPNSKSWDMPLQAIHKLKELFNDLDIS CEEEEEECCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC EDVDQDYKAPKYDFNQELESVNYKPLKIFAEWCLNQLPDYFYEVAASSTGKYHPAYALGE CCCCHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECC GGLVRHTIAAVRIAEELFKCETIQEFEFREKNIIRVALLLHDGVKHGLDGSQYTVTTHPI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHH EVVKYLEDRYFEVSEETLPDEVIEVMECDLWEDIASCIKSHMGQWNTDYKTGEEILPKPQ HHHHHHHHHHHHCCHHCCHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCH TEMQKFTHLCDYLASRKMLEVNFNVEG HHHHHHHHHHHHHHCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA