| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170754385
Identifier: 170754385
GI number: 170754385
Start: 2340784
End: 2340957
Strand: Reverse
Name: 170754385
Synonym: CLD_2429
Alternate gene names: NA
Gene position: 2340957-2340784 (Counterclockwise)
Preceding gene: 170755799
Following gene: 170754777
Centisome position: 59.14
GC content: 30.46
Gene sequence:
>174_bases ATGGGGGATTTATTAAAAGCTTTAAATTTAATAAAAGAAACTTGTGATAAGCAAGAAGGTTGTAAAAAGTGTCCTTTAAG TAGTGAAGATATTTGCTTGATAACAGAACATTGTCCAAGTGAATGGGATGTTCAAACTGAACCAATTGTAAAGCTTATGC TTTTTAAAGAGTAG
Upstream 100 bases:
>100_bases CTAAGCCACAAACTGAAATGCAAAAGTTTACTCACTTGTGTGATTACTTAGCTAGTAGAAAGATGTTAGAAGTTAATTTT AATGTGGAGGGGTAGAAATT
Downstream 100 bases:
>100_bases GTGATTAAAATTTGCAATATTCACATTCAAGGGTAGAAAGTTTTAAATCTTGCCCTTATAAATATAAATTACGATATGTA GACAAGCTTAAAACTATTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 57; Mature: 56
Protein sequence:
>57_residues MGDLLKALNLIKETCDKQEGCKKCPLSSEDICLITEHCPSEWDVQTEPIVKLMLFKE
Sequences:
>Translated_57_residues MGDLLKALNLIKETCDKQEGCKKCPLSSEDICLITEHCPSEWDVQTEPIVKLMLFKE >Mature_56_residues GDLLKALNLIKETCDKQEGCKKCPLSSEDICLITEHCPSEWDVQTEPIVKLMLFKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6496; Mature: 6364
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 12.3 %Cys+Met (Translated Protein) 8.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 10.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDLLKALNLIKETCDKQEGCKKCPLSSEDICLITEHCPSEWDVQTEPIVKLMLFKE CCHHHHHHHHHHHHHCHHCCHHCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHCCCC >Mature Secondary Structure GDLLKALNLIKETCDKQEGCKKCPLSSEDICLITEHCPSEWDVQTEPIVKLMLFKE CHHHHHHHHHHHHHCHHCCHHCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA